Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_A19
         (181 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   1.8  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    19   5.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    19   7.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    19   7.2  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    19   7.2  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -2

Query: 114 LLNTDHVISIDYNELEALEF 55
           +LN  H IS DY  L  L F
Sbjct: 537 ILNKGHDISADYWSLGVLMF 556


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +3

Query: 114 NVLSYYITTIN**SVFELQHD 176
           N++ YY+   N     +L HD
Sbjct: 286 NIIDYYLVLENTDHTKQLSHD 306


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 129 NRITHLLNTDHVISI 85
           NRITH+L     I I
Sbjct: 17  NRITHILANSPAIII 31


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 129 NRITHLLNTDHVISI 85
           NRITH+L     I I
Sbjct: 55  NRITHILANSPAIII 69


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 96  VISIDYNELEALEFNSP 46
           ++ +  NE+  L+ NSP
Sbjct: 216 ILDLSRNEITRLQENSP 232


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,656
Number of Sequences: 438
Number of extensions: 818
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 39
effective length of database: 129,261
effective search space used:  2585220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)