Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_A14
(262 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7 prot... 101 5e-22
M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein. 101 5e-22
BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7 pr... 101 5e-22
BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7 pr... 101 5e-22
BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7 pr... 101 5e-22
AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein. 101 5e-22
AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7 va... 66 1e-11
BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein. 31 0.50
BC126410-1|AAI26411.1| 516|Homo sapiens leucine rich repeat tra... 30 1.5
BC126408-1|AAI26409.1| 516|Homo sapiens leucine rich repeat tra... 30 1.5
AY182026-1|AAO67547.1| 516|Homo sapiens leucine-rich repeat tra... 30 1.5
AB007876-1|BAA24846.2| 529|Homo sapiens KIAA0416 protein. 30 1.5
X71923-1|CAA50739.1| 750|Homo sapiens tenascin-X precursor prot... 27 8.2
U89337-3|AAB47488.1| 4289|Homo sapiens tenascin X protein. 27 8.2
AY160217-1|AAO17576.1| 577|Homo sapiens xenobiotic/medium-chain... 27 8.2
AL772248-1|CAI18078.1| 4222|Homo sapiens tenascin XB protein. 27 8.2
AL662884-1|CAI18332.1| 4222|Homo sapiens tenascin XB protein. 27 8.2
AL662849-16|CAI17471.1| 4222|Homo sapiens tenascin XB protein. 27 8.2
AL662828-1|CAI17414.1| 4222|Homo sapiens tenascin XB protein. 27 8.2
AL645922-1|CAI41718.1| 4222|Homo sapiens tenascin XB protein. 27 8.2
AL049547-2|CAB89296.1| 4288|Homo sapiens dJ34F7.1.1 (tenascin XB... 27 8.2
AB073604-1|BAD38642.1| 577|Homo sapiens putative protein produc... 27 8.2
>Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 101 bits (241), Expect = 5e-22
Identities = 45/57 (78%), Positives = 51/57 (89%)
Frame = -1
Query: 262 FPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 92
FP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 135 FPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein.
Length = 192
Score = 101 bits (241), Expect = 5e-22
Identities = 45/57 (78%), Positives = 51/57 (89%)
Frame = -1
Query: 262 FPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 92
FP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 133 FPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 189
>BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 101 bits (241), Expect = 5e-22
Identities = 45/57 (78%), Positives = 51/57 (89%)
Frame = -1
Query: 262 FPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 92
FP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 135 FPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 101 bits (241), Expect = 5e-22
Identities = 45/57 (78%), Positives = 51/57 (89%)
Frame = -1
Query: 262 FPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 92
FP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 135 FPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 101 bits (241), Expect = 5e-22
Identities = 45/57 (78%), Positives = 51/57 (89%)
Frame = -1
Query: 262 FPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 92
FP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 135 FPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 101 bits (241), Expect = 5e-22
Identities = 45/57 (78%), Positives = 51/57 (89%)
Frame = -1
Query: 262 FPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 92
FP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 135 FPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7
variant protein.
Length = 78
Score = 66.5 bits (155), Expect = 1e-11
Identities = 30/36 (83%), Positives = 33/36 (91%)
Frame = -1
Query: 262 FPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKV 155
FP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV
Sbjct: 26 FPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKV 61
>BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein.
Length = 577
Score = 31.5 bits (68), Expect = 0.50
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 138 TDWKVSTLCSIVVCWFLSRCTLMSCEPSSFTLMRLPTISA 257
T W ++ LCS++ W L CT + P L+ L T+S+
Sbjct: 263 TGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSS 302
>BC126410-1|AAI26411.1| 516|Homo sapiens leucine rich repeat
transmembrane neuronal 2 protein.
Length = 516
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -1
Query: 214 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 131
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 85 SQLTWLHLDHNQISTV--KEDAFQGLYK 110
>BC126408-1|AAI26409.1| 516|Homo sapiens leucine rich repeat
transmembrane neuronal 2 protein.
Length = 516
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -1
Query: 214 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 131
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 85 SQLTWLHLDHNQISTV--KEDAFQGLYK 110
>AY182026-1|AAO67547.1| 516|Homo sapiens leucine-rich repeat
transmembrane neuronal 2 protein protein.
Length = 516
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -1
Query: 214 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 131
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 85 SQLTWLHLDHNQISTV--KEDAFQGLYK 110
>AB007876-1|BAA24846.2| 529|Homo sapiens KIAA0416 protein.
Length = 529
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -1
Query: 214 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 131
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 98 SQLTWLHLDHNQISTV--KEDAFQGLYK 123
>X71923-1|CAA50739.1| 750|Homo sapiens tenascin-X precursor
protein.
Length = 750
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +3
Query: 150 VSTLCSIVVCWFLSRCTLMSCEP 218
V TLCS+ + LSRCT SCEP
Sbjct: 142 VRTLCSLHGVFDLSRCT-CSCEP 163
>U89337-3|AAB47488.1| 4289|Homo sapiens tenascin X protein.
Length = 4289
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +3
Query: 150 VSTLCSIVVCWFLSRCTLMSCEP 218
V TLCS+ + LSRCT SCEP
Sbjct: 139 VRTLCSLHGVFDLSRCT-CSCEP 160
>AY160217-1|AAO17576.1| 577|Homo sapiens xenobiotic/medium-chain
fatty acid:CoA ligase protein.
Length = 577
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 138 TDWKVSTLCSIVVCWFLSRCTLMSCEPSSFTLMRLPTISA 257
T W ++ L S++ W L CT + P L+ L T+S+
Sbjct: 263 TGWILNILGSLLESWTLGACTFVHLLPKFDPLVILKTLSS 302
>AL772248-1|CAI18078.1| 4222|Homo sapiens tenascin XB protein.
Length = 4222
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +3
Query: 150 VSTLCSIVVCWFLSRCTLMSCEP 218
V TLCS+ + LSRCT SCEP
Sbjct: 139 VRTLCSLHGVFDLSRCT-CSCEP 160
>AL662884-1|CAI18332.1| 4222|Homo sapiens tenascin XB protein.
Length = 4222
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +3
Query: 150 VSTLCSIVVCWFLSRCTLMSCEP 218
V TLCS+ + LSRCT SCEP
Sbjct: 139 VRTLCSLHGVFDLSRCT-CSCEP 160
>AL662849-16|CAI17471.1| 4222|Homo sapiens tenascin XB protein.
Length = 4222
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +3
Query: 150 VSTLCSIVVCWFLSRCTLMSCEP 218
V TLCS+ + LSRCT SCEP
Sbjct: 139 VRTLCSLHGVFDLSRCT-CSCEP 160
>AL662828-1|CAI17414.1| 4222|Homo sapiens tenascin XB protein.
Length = 4222
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +3
Query: 150 VSTLCSIVVCWFLSRCTLMSCEP 218
V TLCS+ + LSRCT SCEP
Sbjct: 139 VRTLCSLHGVFDLSRCT-CSCEP 160
>AL645922-1|CAI41718.1| 4222|Homo sapiens tenascin XB protein.
Length = 4222
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +3
Query: 150 VSTLCSIVVCWFLSRCTLMSCEP 218
V TLCS+ + LSRCT SCEP
Sbjct: 139 VRTLCSLHGVFDLSRCT-CSCEP 160
>AL049547-2|CAB89296.1| 4288|Homo sapiens dJ34F7.1.1 (tenascin XB
(isoform 1)) protein.
Length = 4288
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +3
Query: 150 VSTLCSIVVCWFLSRCTLMSCEP 218
V TLCS+ + LSRCT SCEP
Sbjct: 138 VRTLCSLHGVFDLSRCT-CSCEP 159
>AB073604-1|BAD38642.1| 577|Homo sapiens putative protein product
of HYST1046 protein.
Length = 577
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 138 TDWKVSTLCSIVVCWFLSRCTLMSCEPSSFTLMRLPTISA 257
T W ++ L S++ W L CT + P L+ L T+S+
Sbjct: 263 TGWILNILGSLLESWTLGACTFVHLLPKFDPLVILKTLSS 302
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,410,876
Number of Sequences: 237096
Number of extensions: 481879
Number of successful extensions: 1446
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1442
length of database: 76,859,062
effective HSP length: 64
effective length of database: 61,684,918
effective search space used: 1357068196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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