Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_A11
         (370 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    24   0.66 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   4.6  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    20   8.1  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    20   8.1  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           20   8.1  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.8 bits (49), Expect = 0.66
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 164 RQQIRLNQLHLTKFRLKYPFTAPTRVVRK 250
           R+ I +N LH   + L YPF    R+V K
Sbjct: 200 REDIGIN-LHHWHWHLVYPFEGDIRIVNK 227


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 3/37 (8%)
 Frame = +1

Query: 157 CFAATNSPQPTPFN---KIPPKIPFYSTHTCCQKSVD 258
           CFA  +   P       ++PP  P Y  +  C   +D
Sbjct: 447 CFAQDDGLCPYTLKHKIRVPPGTPIYECNKRCNCDID 483


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -2

Query: 240 TRVGAVKGYFR 208
           T +GA+KGY++
Sbjct: 27  TPLGAIKGYYK 37


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +1

Query: 160 FAATNSPQPTPFNKIPPKIP 219
           F    + +PT F+ + PK P
Sbjct: 349 FGKILATEPTLFSNVTPKFP 368


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -2

Query: 240 TRVGAVKGYFR 208
           T +GA+KGY++
Sbjct: 27  TPLGAIKGYYK 37


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,401
Number of Sequences: 438
Number of extensions: 1928
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8804355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)