Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_A10
         (192 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   1.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    20   2.3  
AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced prot...    20   2.3  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    19   7.1  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    18   9.4  

>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 1.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 1   ARGQLAALVESTCVEWGISQCGIC 72
           A GQ+    E    E+G S+C +C
Sbjct: 254 ADGQIMVDYEDEFDEFGDSKCSLC 277


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 20.2 bits (40), Expect = 2.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 67  ICLLPCLYLFNNYRDAIKIVLQLIL 141
           + ++PCL LF N    + +V +  L
Sbjct: 193 LVIVPCLTLFGNVLVILAVVRERAL 217


>AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced
          protein 75 protein.
          Length = 36

 Score = 20.2 bits (40), Expect = 2.3
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 68 IPH*LIPHSTQVDSTRAASWP 6
          +PH L P+   +DST +++ P
Sbjct: 10 LPHHLSPNMPTMDSTVSSAKP 30


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -1

Query: 189 NVHIKGV 169
           N+HIKGV
Sbjct: 411 NIHIKGV 417


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -1

Query: 42  NTSRFDKS 19
           NTSR DKS
Sbjct: 99  NTSRLDKS 106


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,127
Number of Sequences: 438
Number of extensions: 923
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 43
effective length of database: 127,509
effective search space used:  2550180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)