Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_A04
(382 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 25 0.30
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 25 0.30
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 24 0.69
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 23 1.2
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 23 1.6
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 23 1.6
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 23 1.6
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 2.8
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 4.9
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 21 4.9
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 4.9
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 6.5
AY078401-1|AAL83704.1| 27|Apis mellifera major royal jelly pro... 21 6.5
M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee homeobox-... 20 8.5
M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee homeobox-... 20 8.5
M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee homeobox-... 20 8.5
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 20 8.5
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 20 8.5
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 20 8.5
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 25.0 bits (52), Expect = 0.30
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = +1
Query: 25 YYTPFFISIFNYYFIL 72
Y+ P F+ I++Y+FI+
Sbjct: 225 YFVPLFLIIYSYWFII 240
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 25.0 bits (52), Expect = 0.30
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = +1
Query: 25 YYTPFFISIFNYYFIL 72
Y+ P F+ I++Y+FI+
Sbjct: 101 YFVPLFLIIYSYWFII 116
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 23.8 bits (49), Expect = 0.69
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 22 AYYTPFFISIFNYYFI 69
++Y P F+ +F YY I
Sbjct: 214 SFYLPLFVMVFTYYKI 229
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 23.0 bits (47), Expect = 1.2
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -1
Query: 244 LACSQTQPGRCNRD 203
LAC ++PG+C R+
Sbjct: 172 LACISSRPGQCGRE 185
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 22.6 bits (46), Expect = 1.6
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 199 VCLGCICQAVSG 234
VCLG +CQ +G
Sbjct: 8 VCLGIVCQGTTG 19
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 22.6 bits (46), Expect = 1.6
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 199 VCLGCICQAVSG 234
VCLG +CQ +G
Sbjct: 8 VCLGIVCQGTTG 19
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 22.6 bits (46), Expect = 1.6
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 199 VCLGCICQAVSG 234
VCLG +CQ +G
Sbjct: 8 VCLGIVCQGTTG 19
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.8 bits (44), Expect = 2.8
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 200 YVSVASARLCLAASKALSVKATLAVCSISHGRTG 301
YV ++ LC + AL ++ T VC I G
Sbjct: 696 YVLLSGILLCYLVTFALVLRPTDIVCGIQRFAAG 729
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.0 bits (42), Expect = 4.9
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 46 SIFNYYFILNIF*SVIMA--SAVIKFSAIILIVGVCLADVYDVPQVNQ 183
++ Y I + F S M+ S +KF +I ++ +CLA VPQ Q
Sbjct: 149 TVERYIAICHPFISHTMSKLSRAVKFIIVIWLLALCLA----VPQAIQ 192
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.0 bits (42), Expect = 4.9
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 194 RKYVSVASARLCLAASKALSVKATLAVC 277
R YVS S+ + + A S++ LA+C
Sbjct: 117 RAYVSEMSSYVSVLTIVAFSMERYLAIC 144
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.0 bits (42), Expect = 4.9
Identities = 9/31 (29%), Positives = 12/31 (38%)
Frame = -3
Query: 293 GHVIWNKPQASPSHLVPCLQPDTAWQMQPRH 201
G + W K + L P AWQ+ H
Sbjct: 85 GFLAWAKHNPRGKDALWSLVPHMAWQLSTAH 115
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 20.6 bits (41), Expect = 6.5
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 199 VCLGCICQAVSG 234
VCLG CQ + G
Sbjct: 9 VCLGIACQNIRG 20
>AY078401-1|AAL83704.1| 27|Apis mellifera major royal jelly
protein MRJP4 protein.
Length = 27
Score = 20.6 bits (41), Expect = 6.5
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 199 VCLGCICQAVSG 234
VCLG CQ + G
Sbjct: 9 VCLGIACQNIRG 20
>M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H15. ).
Length = 74
Score = 20.2 bits (40), Expect = 8.5
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 3 TRKTRTRILHAIFYIHLQLLFYFK 74
TR+ R I HA+ Q+ +F+
Sbjct: 34 TRRRRIEIAHALCLTERQIKIWFQ 57
>M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H90. ).
Length = 74
Score = 20.2 bits (40), Expect = 8.5
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 3 TRKTRTRILHAIFYIHLQLLFYFK 74
TR+ R I HA+ Q+ +F+
Sbjct: 34 TRRRRIEIAHALCLTERQIKIWFQ 57
>M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H55. ).
Length = 86
Score = 20.2 bits (40), Expect = 8.5
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 3 TRKTRTRILHAIFYIHLQLLFYFK 74
TR+ R I HA+ Q+ +F+
Sbjct: 34 TRRRRIEIAHALCLTERQIKIWFQ 57
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 20.2 bits (40), Expect = 8.5
Identities = 6/19 (31%), Positives = 12/19 (63%)
Frame = -2
Query: 165 IINISKTHADNQNYGTELN 109
++NI K+ +++ Y T N
Sbjct: 186 VVNIEKSENESKKYATSSN 204
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 20.2 bits (40), Expect = 8.5
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 3 TRKTRTRILHAIFYIHLQLLFYFK 74
TR+ R I HA+ Q+ +F+
Sbjct: 296 TRRRRIEIAHALCLTERQIKIWFQ 319
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 20.2 bits (40), Expect = 8.5
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +3
Query: 3 TRKTRTRILHAIFYIHLQ 56
T T TR+LH I H Q
Sbjct: 183 TTSTGTRLLHGILSQHPQ 200
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,231
Number of Sequences: 438
Number of extensions: 2260
Number of successful extensions: 19
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 9300375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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