Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_A02
         (239 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M17214-2|AAA28508.1|  858|Drosophila melanogaster protein ( D.me...    28   2.0  
AY118323-1|AAM48352.1| 1843|Drosophila melanogaster LD10526p pro...    27   3.5  
AE014298-2899|AAF48990.3| 2006|Drosophila melanogaster CG12238-P...    27   3.5  
AY113371-1|AAM29376.1| 1237|Drosophila melanogaster LP01827p pro...    26   6.1  
AE014298-2399|AAF48606.2| 1342|Drosophila melanogaster CG4301-PA...    26   6.1  
AY084162-1|AAL89900.1|  331|Drosophila melanogaster RE37150p pro...    26   8.1  
AE014296-1729|AAF50210.2| 1392|Drosophila melanogaster CG32046-P...    26   8.1  

>M17214-2|AAA28508.1|  858|Drosophila melanogaster protein (
           D.melanogaster Fw repetitiveelement putative reverse
           transcriptase, complete cds,and putative binding
           protein, 3' end. ).
          Length = 858

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +1

Query: 91  TDYSDFLSRLRRYMCNLKPTTVTRHGKSNIL 183
           +D+S  L  LRRY  N+KP T     K+N L
Sbjct: 213 SDHSPVLIHLRRYAENVKPPTRLTSSKTNWL 243


>AY118323-1|AAM48352.1| 1843|Drosophila melanogaster LD10526p protein.
          Length = 1843

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 16   SAELVYGETLKLPSDFFLASSVAEVTDYS 102
            SA+ + G  LK P    + + VAE TDYS
Sbjct: 1124 SADAILGSALKRPKKKKMETCVAEDTDYS 1152


>AE014298-2899|AAF48990.3| 2006|Drosophila melanogaster CG12238-PA
            protein.
          Length = 2006

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 16   SAELVYGETLKLPSDFFLASSVAEVTDYS 102
            SA+ + G  LK P    + + VAE TDYS
Sbjct: 1287 SADAILGSALKRPKKKKMETCVAEDTDYS 1315


>AY113371-1|AAM29376.1| 1237|Drosophila melanogaster LP01827p
           protein.
          Length = 1237

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 18/50 (36%), Positives = 23/50 (46%)
 Frame = +1

Query: 40  TLKLPSDFFLASSVAEVTDYSDFLSRLRRYMCNLKPTTVTRHGKSNILCS 189
           T  LP  F +A + A+   Y D L      + N  P TV R GK  I+ S
Sbjct: 16  TSLLPLVFVIAVTAAK-QGYEDILRYRTDNVVNSSPVTVIRDGKEAIIKS 64


>AE014298-2399|AAF48606.2| 1342|Drosophila melanogaster CG4301-PA
           protein.
          Length = 1342

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 18/50 (36%), Positives = 23/50 (46%)
 Frame = +1

Query: 40  TLKLPSDFFLASSVAEVTDYSDFLSRLRRYMCNLKPTTVTRHGKSNILCS 189
           T  LP  F +A + A+   Y D L      + N  P TV R GK  I+ S
Sbjct: 121 TSLLPLVFVIAVTAAK-QGYEDILRYRTDNVVNSSPVTVIRDGKEAIIKS 169


>AY084162-1|AAL89900.1|  331|Drosophila melanogaster RE37150p
           protein.
          Length = 331

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +1

Query: 67  LASSVAEVTDYSDFLSRLRRYMCNLKPTTVTRHGKSN 177
           L+ S  E T Y+     L  +   L  TT+ RH +SN
Sbjct: 149 LSRSKPEYTSYTTHFPMLHLHDSTLAATTIIRHHQSN 185


>AE014296-1729|AAF50210.2| 1392|Drosophila melanogaster CG32046-PA,
            isoform A protein.
          Length = 1392

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +1

Query: 67   LASSVAEVTDYSDFLSRLRRYMCNLKPTTVTRHGKSN 177
            L+ S  E T Y+     L  +   L  TT+ RH +SN
Sbjct: 1210 LSRSKPEYTSYTTHFPMLHLHDSTLAATTIIRHHQSN 1246


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,805,463
Number of Sequences: 53049
Number of extensions: 157546
Number of successful extensions: 302
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 302
length of database: 24,988,368
effective HSP length: 59
effective length of database: 21,858,477
effective search space used: 437169540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)