Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_A02
         (239 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   0.91 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   1.6  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    20   4.9  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    20   4.9  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    19   6.4  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     19   8.5  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    19   8.5  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 0.91
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = -2

Query: 142 SNCTCIGADVIRSHCNQ*LLQPMTQGKNR*GALKFL-HIQALLRNF 8
           S+C+C+  D IR   +   LQ     ++       L  + A++RNF
Sbjct: 324 SSCSCLDCDEIRESLDTQFLQVCRSRRHSDSCCLCLDSMNAVIRNF 369


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 1.6
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -1

Query: 143 FKLHMYRRRRDKKS 102
           +K H++++ RDKKS
Sbjct: 422 WKTHVWKKGRDKKS 435


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 19.8 bits (39), Expect = 4.9
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = +1

Query: 7   GSSSAELVYG--ETLKLPSDFFLASSVAEVTDYSDFLSRLRRYM 132
           G ++ E++    ETL+ PS   + SS  +  +   F    ++YM
Sbjct: 342 GGNNIEIIVKDPETLQFPSGMKIISSKKDRQELWIFTISFQKYM 385


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 19.8 bits (39), Expect = 4.9
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +1

Query: 10  SSSAELVYGETLKLPSDFFLASSVAEVTDYSDF 108
           SSS E +  + L L +D   +SS    ++ +DF
Sbjct: 354 SSSEEKLKQDILNLRTDISSSSSSISSSEENDF 386


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 19.4 bits (38), Expect = 6.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 218 RPEMIFVDPYEQRI 177
           RP  +  DPY QR+
Sbjct: 462 RPFEVRYDPYTQRV 475


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 19.0 bits (37), Expect = 8.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 80  TDDARKKSLGSFKVSPYTSSAEELPR 3
           T++ +KK+  S   S   S  E LP+
Sbjct: 537 TEEEKKKTKQSLSPSENQSKMEILPK 562


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 19.0 bits (37), Expect = 8.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 162 SCYGCRFQIAHVSA 121
           SC+ C++ IA  SA
Sbjct: 42  SCHKCKYGIAMSSA 55


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,250
Number of Sequences: 438
Number of extensions: 777
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4024224
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)