Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_P21
         (351 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-3351|ABI31326.1|  574|Drosophila melanogaster CG9243-PB...    79   1e-15
X86685-1|CAA60383.1| 1283|Drosophila melanogaster neurexin IV pr...    29   2.2  
AE014296-2104|AAF49951.1| 1284|Drosophila melanogaster CG6827-PA...    29   2.2  
AE014296-2103|AAN12252.1| 1366|Drosophila melanogaster CG6827-PB...    29   2.2  

>AE014134-3351|ABI31326.1|  574|Drosophila melanogaster CG9243-PB,
           isoform B protein.
          Length = 574

 Score = 79.4 bits (187), Expect = 1e-15
 Identities = 33/61 (54%), Positives = 46/61 (75%)
 Frame = +2

Query: 146 MSSGEYRSVWRIVFRNFINSLKPKQIRGNNMGKDYIGNVYYEIPADPRSGKRKATRWYDP 325
           M++   R V  I+F+NF  SL+P+Q RG+ +G+DY GN YYEIPA+P  GKRK +RW++P
Sbjct: 425 MANKPTRDVIGIIFKNFWKSLRPRQFRGDYIGEDYFGNKYYEIPANPSIGKRKPSRWFEP 484

Query: 326 A 328
           A
Sbjct: 485 A 485


>X86685-1|CAA60383.1| 1283|Drosophila melanogaster neurexin IV
           protein.
          Length = 1283

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +2

Query: 185 FRNFIN-SLKPKQIRGNNMGKDYIGNVYYEIPADPRSGKRKATRWYD 322
           +R+++N + +P+  +GN+ G     NV+ E+P   +  +   TRW+D
Sbjct: 128 WRSYVNPTSEPQMFKGNSDGNSIHYNVF-EVPIIAQWVRINPTRWHD 173


>AE014296-2104|AAF49951.1| 1284|Drosophila melanogaster CG6827-PA,
           isoform A protein.
          Length = 1284

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +2

Query: 185 FRNFIN-SLKPKQIRGNNMGKDYIGNVYYEIPADPRSGKRKATRWYD 322
           +R+++N + +P+  +GN+ G     NV+ E+P   +  +   TRW+D
Sbjct: 129 WRSYVNPTSEPQMFKGNSDGNSIHYNVF-EVPIIAQWVRINPTRWHD 174


>AE014296-2103|AAN12252.1| 1366|Drosophila melanogaster CG6827-PB,
           isoform B protein.
          Length = 1366

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +2

Query: 185 FRNFIN-SLKPKQIRGNNMGKDYIGNVYYEIPADPRSGKRKATRWYD 322
           +R+++N + +P+  +GN+ G     NV+ E+P   +  +   TRW+D
Sbjct: 211 WRSYVNPTSEPQMFKGNSDGNSIHYNVF-EVPIIAQWVRINPTRWHD 256


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,336,510
Number of Sequences: 53049
Number of extensions: 221524
Number of successful extensions: 385
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 385
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 838265760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)