Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_P18
         (633 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               22   4.3  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    22   4.3  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   5.7  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    21   9.9  

>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 301 PRAVMQETKKAFRKLPNIES 360
           PR++   TKK F K  +I++
Sbjct: 85  PRSMQDSTKKLFNKCKSIQN 104


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/32 (25%), Positives = 18/32 (56%)
 Frame = +3

Query: 75  KLYPQAIKLKAELKTKKPEELIKLDNWYQNEL 170
           +++  A  +KA     +  EL K+D W+ +++
Sbjct: 253 RMFVLAASIKAGYTIDRLYELTKIDKWFLHKM 284


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -2

Query: 395 PTPFRLLSAVIADSIFGSLRKAF 327
           P PF +L        F SLRKAF
Sbjct: 317 PFPFLMLPLGAGRPAFWSLRKAF 339


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 617 NANSTMCGDHFLPQP 573
           N N  +CG +FL +P
Sbjct: 86  NDNEEVCGIYFLAEP 100


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,242
Number of Sequences: 438
Number of extensions: 3932
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)