Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_P16
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    26   0.26 
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    26   0.26 
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    26   0.26 
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      24   0.81 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   5.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   5.7  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   7.5  
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              21   10.0 

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 25.8 bits (54), Expect = 0.26
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = +2

Query: 188 DKFYECVDGVATT--KICPDGLVFDPTIRKINKCDQPFNVDCGDRTE 322
           DKFY+C+   A T        + F+    K  K + P    CG+RTE
Sbjct: 93  DKFYDCLKNSADTISSYFVGKMYFNLIDTKCYKLEHPV-TGCGERTE 138


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 25.8 bits (54), Expect = 0.26
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = +2

Query: 188 DKFYECVDGVATT--KICPDGLVFDPTIRKINKCDQPFNVDCGDRTE 322
           DKFY+C+   A T        + F+    K  K + P    CG+RTE
Sbjct: 98  DKFYDCLKNSADTISSYFVGKMYFNLIDTKCYKLEHPV-TGCGERTE 143


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 25.8 bits (54), Expect = 0.26
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = +2

Query: 188 DKFYECVDGVATT--KICPDGLVFDPTIRKINKCDQPFNVDCGDRTE 322
           DKFY+C+   A T        + F+    K  K + P    CG+RTE
Sbjct: 98  DKFYDCLKNSADTISSYFVGKMYFNLIDTKCYKLEHPV-TGCGERTE 143


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 24.2 bits (50), Expect = 0.81
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -1

Query: 501 AESGQTQVPEYSSKWRPAVHFTSVASP 421
           AES  +  P++  ++ P+ H   ++SP
Sbjct: 35  AESSASNSPDHYERFSPSTHLMDLSSP 61


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 146 CPNKDGQYEDERQC 187
           CP+ DG+  D  QC
Sbjct: 11  CPDNDGKMVDLTQC 24


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 170 EDERQCDKFYECVDG 214
           ED +  DK Y C+DG
Sbjct: 419 EDWKPLDKCYFCLDG 433


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 379 VSEETVTAWALAVWLGG 329
           V+ ET TA  LAV +GG
Sbjct: 298 VARETKTAGTLAVVVGG 314


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +2

Query: 203 CVDGVATTKICPDGLVFDPTIRKIN 277
           C D   T K CP G     T+  +N
Sbjct: 81  CGDIAHTVKYCPKGTKNPGTLATVN 105


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,395
Number of Sequences: 438
Number of extensions: 2349
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)