Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_P14
         (480 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    26   0.58 
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   1.0  
AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol ...    23   4.1  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   4.1  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   5.4  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    22   9.5  

>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 26.2 bits (55), Expect = 0.58
 Identities = 17/63 (26%), Positives = 30/63 (47%)
 Frame = -3

Query: 208 CLAEVLLPRLVDHILNYGHSFSPERALRLVTMTVTTHRLKSFLDD*KVFREELHLLLYII 29
           CLA   L R ++   N+G+    E     +T T        F+DD K+F E +  + +++
Sbjct: 679 CLAMNPLSRTLNQQCNFGYLLKSEEISTRITHTF-------FMDDLKLFAETVQKMHHLL 731

Query: 28  RTV 20
           + V
Sbjct: 732 KNV 734


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 25.4 bits (53), Expect = 1.0
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = -2

Query: 437 PLSNVVSVFLW*IYVLVLYKTLMVLTVSHYLGLSSCAVGQSDIMSSSEHADGSG-ANCRL 261
           PL  V+SV    + VL   KTL VLT++H   L+   V +S       H  G+G   C  
Sbjct: 794 PLDAVISVGKKFV-VLCDLKTLRVLTINHKGNLNDTEVQKSLPPKFLIHTFGNGFLMCSA 852

Query: 260 DTVD 249
            ++D
Sbjct: 853 SSID 856


>AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol
           kinase protein.
          Length = 555

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +1

Query: 205 GNPLYSHIRYADGRESTVSNRQLAPLP 285
           G PLY+ I + D R     +R LA LP
Sbjct: 102 GEPLYNAIVWNDIRTDKTVDRVLARLP 128


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 294 AC*RKWC*LPIRYCGFTSIC 235
           +C RK+  LPI  CG  ++C
Sbjct: 849 SCVRKFSTLPILACGQNNVC 868


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 362 LEPSESYTEPVRRSTRERRIPH 427
           L+PS   T P  +S+R+RR  H
Sbjct: 404 LQPSTLPTRPSPKSSRKRRTGH 425


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 365 EPSESYTEPVRRSTRERRIPH 427
           +P E+Y E VRRS  ++  PH
Sbjct: 424 QPYEAYLESVRRS--KKSFPH 442


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 495,031
Number of Sequences: 2352
Number of extensions: 8682
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 41863041
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)