Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_P14
         (480 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    24   0.97 
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              22   3.0  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   3.0  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   6.9  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   9.1  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   9.1  

>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.8 bits (49), Expect = 0.97
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +1

Query: 184 EEVELLQGNPLYSHIRYADGRESTVSNRQL 273
           +EVE + G+PL   ++Y+D +E  +S R +
Sbjct: 498 DEVEYVFGHPLNKSLKYSD-KERDLSLRMI 526


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 295 SDEDMMSDCPTAQEESP 345
           S + ++SDC T  EE+P
Sbjct: 96  SVKQLVSDCSTISEENP 112


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 346 WDFLLVLLGSQTSCP 302
           W+FLL LL  +  CP
Sbjct: 461 WEFLLKLLQDREYCP 475


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 366 SNCVSLLGTFFLC 328
           S+ V LLGT+F C
Sbjct: 288 SDAVPLLGTYFNC 300


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = -2

Query: 365 LTVSHYLGLSSCAVGQSDIMSSSEHADGSGANCRLD 258
           LT +    ++   + + D    S+  DG  ++CR D
Sbjct: 178 LTENRLRDINDIGLNRRDSDDGSDGNDGDESSCRAD 213


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +1

Query: 112 SWLLTEGHVLVKKNVRNSKYDPLVEEVELLQGNPL 216
           SW   E H+ V + ++    + ++ +     GNPL
Sbjct: 155 SWHSPEAHISVAQKLQKEIPNSIILDQYTNPGNPL 189


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,072
Number of Sequences: 438
Number of extensions: 2724
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13051674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)