Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_P13
         (475 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069515-1|AAL39660.1|  620|Drosophila melanogaster LD23533p pro...    28   5.6  
AF177386-1|AAD51369.1| 3584|Drosophila melanogaster huntingtin h...    28   5.6  
AF147779-1|AAF03256.1| 3583|Drosophila melanogaster Huntington d...    28   5.6  
AF146362-1|AAF03255.1| 3583|Drosophila melanogaster Huntington d...    28   5.6  
AE014297-4258|AAF56808.1| 3583|Drosophila melanogaster CG9995-PA...    28   5.6  

>AY069515-1|AAL39660.1|  620|Drosophila melanogaster LD23533p
           protein.
          Length = 620

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -3

Query: 353 LQKRFNKSKLKICINFFPVYIVPSYKESFVHFY 255
           +++  N+  L+IC+N F  Y  P  KE  + +Y
Sbjct: 104 IKRNGNQRSLRICLNLFS-YYAPQIKEKHIKWY 135


>AF177386-1|AAD51369.1| 3584|Drosophila melanogaster huntingtin
           homolog protein.
          Length = 3584

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -3

Query: 353 LQKRFNKSKLKICINFFPVYIVPSYKESFVHFY 255
           +++  N+  L+IC+N F  Y  P  KE  + +Y
Sbjct: 104 IKRNGNQRSLRICLNLFS-YYAPQIKEKHIKWY 135


>AF147779-1|AAF03256.1| 3583|Drosophila melanogaster Huntington
           disease protein homolog protein.
          Length = 3583

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -3

Query: 353 LQKRFNKSKLKICINFFPVYIVPSYKESFVHFY 255
           +++  N+  L+IC+N F  Y  P  KE  + +Y
Sbjct: 104 IKRNGNQRSLRICLNLFS-YYAPQIKEKHIKWY 135


>AF146362-1|AAF03255.1| 3583|Drosophila melanogaster Huntington
           disease protein homolog protein.
          Length = 3583

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -3

Query: 353 LQKRFNKSKLKICINFFPVYIVPSYKESFVHFY 255
           +++  N+  L+IC+N F  Y  P  KE  + +Y
Sbjct: 104 IKRNGNQRSLRICLNLFS-YYAPQIKEKHIKWY 135


>AE014297-4258|AAF56808.1| 3583|Drosophila melanogaster CG9995-PA
           protein.
          Length = 3583

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -3

Query: 353 LQKRFNKSKLKICINFFPVYIVPSYKESFVHFY 255
           +++  N+  L+IC+N F  Y  P  KE  + +Y
Sbjct: 104 IKRNGNQRSLRICLNLFS-YYAPQIKEKHIKWY 135


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,454,428
Number of Sequences: 53049
Number of extensions: 437283
Number of successful extensions: 802
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1622204766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)