Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_P11
(494 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0789 + 11207769-11208059,11208370-11208557,11208701-112097... 226 9e-60
02_02_0572 + 11667455-11670783,11672026-11672419 196 8e-51
08_02_0259 - 14974526-14974572,14974670-14974742,14974829-149748... 193 6e-50
05_04_0174 - 18728199-18731411 189 9e-49
07_03_0539 - 19237573-19239169,19239258-19239410,19239505-192395... 185 2e-47
06_02_0263 - 13566621-13569875 182 1e-46
06_01_0645 + 4670966-4671021,4671128-4671177,4671270-4671350,467... 127 8e-37
03_05_1133 - 30614901-30615389,30615823-30615933,30616113-306161... 131 3e-31
10_08_0343 - 16960764-16960895,16961166-16961171,16961272-169616... 128 3e-30
04_03_0985 - 21438036-21438116,21438373-21438495,21438903-214389... 115 2e-26
07_03_1304 - 25629822-25629839,25630091-25631148,25631784-256349... 111 3e-25
02_05_0672 + 30775458-30775523,30775594-30775662,30775748-307757... 109 9e-25
01_06_0840 + 32343700-32344138,32345329-32345419,32345584-323458... 74 7e-14
11_03_0215 + 11809068-11809300,11809872-11809964,11810976-118111... 66 1e-11
01_01_1089 - 8560008-8560220,8560456-8560977,8561095-8561283,856... 66 1e-11
03_02_0587 + 9669283-9670497 60 1e-09
01_01_0788 + 6111890-6112002,6112121-6112265,6113012-6113086,611... 39 3e-05
11_01_0601 + 4783354-4783691,4784037-4784151,4784202-4784315 29 1.6
07_01_1146 + 10756897-10757065,10763869-10765521,10765638-107659... 29 2.1
09_06_0204 - 21559024-21559287,21559445-21559567,21559665-215597... 28 4.7
12_02_1238 - 27246769-27246948,27247030-27247104,27247848-272479... 27 6.3
09_04_0434 - 17533633-17534637 27 6.3
12_01_0002 - 4477-6144,6571-7440 27 8.3
11_01_0003 - 6099-7766,8193-9062 27 8.3
07_03_0158 + 14552665-14554209 27 8.3
>03_02_0789 +
11207769-11208059,11208370-11208557,11208701-11209785,
11210163-11210288,11210367-11210605,11210688-11210806,
11210894-11211014
Length = 722
Score = 226 bits (552), Expect = 9e-60
Identities = 104/134 (77%), Positives = 122/134 (91%)
Frame = +1
Query: 19 VACTQPRRVAAMSVAQRVAEEMDVALGQQVGYSIRFEDCSGPQTVLKYMTDGMLLREAMS 198
VACTQPRRVAAMSV++RVAEEMDV +G++VGYSIRFEDCS +TVLKY+TDGMLLREAM+
Sbjct: 114 VACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMA 173
Query: 199 DPMLEQYRVILLDEAHERTLATDILMGVLKEVIKQRSDLKLVIMSATLDAGKFQQYFDNA 378
DP+LE+Y+VI+LDEAHERTLATD+L G+LKEV+K R DLKLV+MSATL+A KFQ YF A
Sbjct: 174 DPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQTYFSGA 233
Query: 379 PLMNIPGRTHPVEI 420
PLM +PGR HPVEI
Sbjct: 234 PLMKVPGRLHPVEI 247
Score = 50.0 bits (114), Expect = 1e-06
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +3
Query: 420 FYTPQPERDYLEAAIRTVSQIHVCE 494
FYT +PERDYLEAAIRTV QIH+CE
Sbjct: 248 FYTQEPERDYLEAAIRTVVQIHMCE 272
>02_02_0572 + 11667455-11670783,11672026-11672419
Length = 1240
Score = 196 bits (478), Expect = 8e-51
Identities = 90/134 (67%), Positives = 110/134 (82%)
Frame = +1
Query: 19 VACTQPRRVAAMSVAQRVAEEMDVALGQQVGYSIRFEDCSGPQTVLKYMTDGMLLREAMS 198
+ CTQPRRVAAMSVA+RVAEE LG++VGY+IRFEDC+GP TV+KYMTDGMLLRE +
Sbjct: 635 IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILV 694
Query: 199 DPMLEQYRVILLDEAHERTLATDILMGVLKEVIKQRSDLKLVIMSATLDAGKFQQYFDNA 378
D L QY VI+LDEAHERT+ TD+L G+LK++IK+RSD++L++ SATLDA KF YF N
Sbjct: 695 DENLSQYSVIMLDEAHERTIHTDVLFGLLKQLIKRRSDMRLIVTSATLDAEKFSGYFFNC 754
Query: 379 PLMNIPGRTHPVEI 420
+ IPGRT PVEI
Sbjct: 755 NIFTIPGRTFPVEI 768
Score = 37.1 bits (82), Expect = 0.008
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +3
Query: 423 YTPQPERDYLEAAIRTVSQIHVCE 494
YT QPE DYL+AA+ TV QIH+ E
Sbjct: 770 YTKQPESDYLDAALITVLQIHLTE 793
>08_02_0259 -
14974526-14974572,14974670-14974742,14974829-14974891,
14975030-14975097,14975172-14975295,14976434-14976493,
14976744-14976806,14976902-14977942,14978027-14978093,
14978188-14978303,14978454-14978540,14978749-14978838,
14979128-14979214,14979366-14979428,14979509-14979566,
14980174-14980231,14980349-14980416,14980508-14980587,
14981084-14981147,14981321-14981392,14981517-14981576,
14982344-14982398,14982487-14982520,14983845-14983931,
14984036-14984122,14984211-14984408,14984509-14984639,
14984739-14984838
Length = 1066
Score = 193 bits (471), Expect = 6e-50
Identities = 90/138 (65%), Positives = 114/138 (82%), Gaps = 1/138 (0%)
Frame = +1
Query: 10 SKG-VACTQPRRVAAMSVAQRVAEEMDVALGQQVGYSIRFEDCSGPQTVLKYMTDGMLLR 186
+KG VACTQPRRVAAMSVA RV++EM V LG +VGYSIRFEDC+ +T++KYMTDGMLLR
Sbjct: 461 AKGKVACTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTLIKYMTDGMLLR 520
Query: 187 EAMSDPMLEQYRVILLDEAHERTLATDILMGVLKEVIKQRSDLKLVIMSATLDAGKFQQY 366
E + +P L Y V+++DEAHERTL+TDIL G++K++ + R DLKL+I SATLDA KF Y
Sbjct: 521 EFLGEPDLASYSVVMVDEAHERTLSTDILFGLVKDISRFRPDLKLLISSATLDAEKFSDY 580
Query: 367 FDNAPLMNIPGRTHPVEI 420
FD+AP+ IPGR +PVE+
Sbjct: 581 FDSAPIFKIPGRRYPVEV 598
Score = 34.7 bits (76), Expect = 0.041
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +3
Query: 423 YTPQPERDYLEAAIRTVSQIHVCE 494
YT PE DY++AAI TV QIHV +
Sbjct: 600 YTKAPEADYIDAAIVTVLQIHVTQ 623
>05_04_0174 - 18728199-18731411
Length = 1070
Score = 189 bits (461), Expect = 9e-49
Identities = 91/140 (65%), Positives = 110/140 (78%)
Frame = +1
Query: 1 ARGSKGVACTQPRRVAAMSVAQRVAEEMDVALGQQVGYSIRFEDCSGPQTVLKYMTDGML 180
A G K VACTQPRRVAAMSVA RVAEEM V LG +VGYSIRFEDC+ +TV+KYMTDGML
Sbjct: 448 AGGRKKVACTQPRRVAAMSVAARVAEEMGVKLGHEVGYSIRFEDCTSEKTVIKYMTDGML 507
Query: 181 LREAMSDPMLEQYRVILLDEAHERTLATDILMGVLKEVIKQRSDLKLVIMSATLDAGKFQ 360
LRE + +P L Y V+++DEAHERTLATDIL G++K++ + R D+KL+I SATL+A KF
Sbjct: 508 LREFLGEPDLGSYSVVVVDEAHERTLATDILFGLVKDIARLRPDMKLLISSATLNADKFS 567
Query: 361 QYFDNAPLMNIPGRTHPVEI 420
+FD AP+ IPGR V I
Sbjct: 568 DFFDAAPVFRIPGRRFEVGI 587
Score = 35.1 bits (77), Expect = 0.031
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 414 GNFYTPQPERDYLEAAIRTVSQIHVCE 494
G YT PE DY++AA+ TV Q+HV E
Sbjct: 586 GIHYTVAPEADYIDAAVVTVLQLHVTE 612
>07_03_0539 - 19237573-19239169,19239258-19239410,19239505-19239566,
19239855-19240103,19240248-19240337,19240453-19240632,
19240713-19240942,19241558-19241735,19242327-19242432,
19242786-19242883,19243683-19243813,19243908-19244087,
19244179-19244443,19244557-19244627,19244707-19244922,
19245147-19245294
Length = 1317
Score = 185 bits (450), Expect = 2e-47
Identities = 82/134 (61%), Positives = 109/134 (81%)
Frame = +1
Query: 19 VACTQPRRVAAMSVAQRVAEEMDVALGQQVGYSIRFEDCSGPQTVLKYMTDGMLLREAMS 198
V CTQPRRVAAMSVA+RV+EEM+ LG +VGY+IRFED + P T++KYMTDG+LLRE +
Sbjct: 668 VGCTQPRRVAAMSVAKRVSEEMETELGHKVGYAIRFEDMTSPNTIIKYMTDGVLLRETLK 727
Query: 199 DPMLEQYRVILLDEAHERTLATDILMGVLKEVIKQRSDLKLVIMSATLDAGKFQQYFDNA 378
D L++YRVI++DEAHER+L TD+L G+LK+V+ +R D KL++ SATL+A KF ++F
Sbjct: 728 DADLDKYRVIVMDEAHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNADKFSKFFGGV 787
Query: 379 PLMNIPGRTHPVEI 420
P+ +IPGRT PV I
Sbjct: 788 PVFHIPGRTFPVNI 801
>06_02_0263 - 13566621-13569875
Length = 1084
Score = 182 bits (444), Expect = 1e-46
Identities = 85/134 (63%), Positives = 108/134 (80%)
Frame = +1
Query: 19 VACTQPRRVAAMSVAQRVAEEMDVALGQQVGYSIRFEDCSGPQTVLKYMTDGMLLREAMS 198
+ACTQPRRVAA SVA+RV+EE LG++VGYSIRF+D +GP TV+KYMTDGMLLRE +
Sbjct: 479 IACTQPRRVAAESVAKRVSEEFGCRLGEEVGYSIRFDDHTGPDTVIKYMTDGMLLREILL 538
Query: 199 DPMLEQYRVILLDEAHERTLATDILMGVLKEVIKQRSDLKLVIMSATLDAGKFQQYFDNA 378
D L Y V++LDEAHERT+ TDIL +LK++I++R+DLKL++ SATLDA KF YF +
Sbjct: 539 DTDLSSYSVVMLDEAHERTIYTDILFALLKKLIRRRTDLKLIVTSATLDAEKFSGYFFDC 598
Query: 379 PLMNIPGRTHPVEI 420
+ IPGRT+PVEI
Sbjct: 599 NIFTIPGRTYPVEI 612
Score = 36.7 bits (81), Expect = 0.010
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +3
Query: 423 YTPQPERDYLEAAIRTVSQIHVCE 494
Y+ QPE DY+ AA+ TVSQIH+ E
Sbjct: 614 YSKQPESDYMHAALLTVSQIHLTE 637
>06_01_0645 +
4670966-4671021,4671128-4671177,4671270-4671350,
4671862-4672078,4673220-4673607,4673830-4674033,
4675174-4675334,4675401-4675586,4675732-4675963,
4676530-4676732,4677074-4677208,4677367-4677550
Length = 698
Score = 127 bits (307), Expect(2) = 8e-37
Identities = 60/99 (60%), Positives = 81/99 (81%)
Frame = +1
Query: 13 KGVACTQPRRVAAMSVAQRVAEEMDVALGQQVGYSIRFEDCSGPQTVLKYMTDGMLLREA 192
K + TQPRRVAA++VA+RVAEE + LG++VGYSIRF+D + T +KYMTDG+LLREA
Sbjct: 78 KVIGITQPRRVAAVTVAKRVAEECNDQLGKKVGYSIRFDDSTSNATRIKYMTDGLLLREA 137
Query: 193 MSDPMLEQYRVILLDEAHERTLATDILMGVLKEVIKQRS 309
+ DP+L +Y VI++DEAHERT+ TD+L+G+LK+V RS
Sbjct: 138 LLDPLLSKYSVIVVDEAHERTVHTDVLLGLLKKVQHSRS 176
Score = 43.6 bits (98), Expect(2) = 8e-37
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = +1
Query: 313 LKLVIMSATLDAGKFQQYFDNAPLMNIPGRTHPVEI 420
LKL+IMSA+LDA F YF +A ++I GR +PV+I
Sbjct: 209 LKLIIMSASLDAKCFSDYFGSAKAVHIQGRQYPVDI 244
Score = 33.1 bits (72), Expect = 0.13
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +3
Query: 423 YTPQPERDYLEAAIRTVSQIHVCE 494
YT QPE DYL+A + T+ QIH+ E
Sbjct: 246 YTYQPESDYLDATLVTIFQIHLEE 269
>03_05_1133 -
30614901-30615389,30615823-30615933,30616113-30616178,
30616347-30616406,30616493-30616801,30616960-30617108,
30617200-30617269,30617370-30617494,30617516-30617573,
30618176-30618370,30618585-30618857,30618950-30619120,
30619203-30619333,30619423-30619582,30619712-30619900,
30620023-30620118,30620381-30620611,30620715-30620853,
30620903-30621057,30621160-30621378
Length = 1131
Score = 131 bits (317), Expect = 3e-31
Identities = 63/139 (45%), Positives = 90/139 (64%)
Frame = +1
Query: 19 VACTQPRRVAAMSVAQRVAEEMDVALGQQVGYSIRFEDCSGPQTVLKYMTDGMLLREAMS 198
+ CTQPRR++AM+VA+RV+ E LG+ VGY +R E G T L + T G+LLR +S
Sbjct: 315 IICTQPRRISAMAVAERVSTERGENLGESVGYKVRLEGIKGKDTHLLFCTSGILLRRLLS 374
Query: 199 DPMLEQYRVILLDEAHERTLATDILMGVLKEVIKQRSDLKLVIMSATLDAGKFQQYFDNA 378
D L + +DE HER + D L+ VLK+++ +R DL+L++MSATL+A F YF A
Sbjct: 375 DRNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLSRRRDLRLILMSATLNAELFSSYFGGA 434
Query: 379 PLMNIPGRTHPVEISTLRN 435
P ++IPG T+PV L +
Sbjct: 435 PTIHIPGFTYPVRAHFLED 453
>10_08_0343 - 16960764-16960895,16961166-16961171,16961272-16961640,
16962118-16962304,16962567-16962759,16962864-16963137,
16963215-16963374,16963985-16964199,16964784-16964876,
16965192-16965260,16965293-16965445,16965534-16965737,
16966416-16966691,16967336-16967431,16967585-16967788,
16967877-16968069,16968229-16968374,16968771-16969425,
16971462-16971774,16971989-16972139,16972602-16973815,
16973933-16974182,16974784-16975035
Length = 1934
Score = 128 bits (308), Expect = 3e-30
Identities = 62/132 (46%), Positives = 88/132 (66%)
Frame = +1
Query: 19 VACTQPRRVAAMSVAQRVAEEMDVALGQQVGYSIRFEDCSGPQTVLKYMTDGMLLREAMS 198
+ CTQPRR++A+SVA R+A E LG VGY IR E QT L + T G+LLR +
Sbjct: 1193 IICTQPRRISAISVAARIASERGEELGDTVGYQIRLESKRSAQTRLLFCTTGVLLRRLVQ 1252
Query: 199 DPMLEQYRVILLDEAHERTLATDILMGVLKEVIKQRSDLKLVIMSATLDAGKFQQYFDNA 378
+P L +L+DE HER + D L+ +L++++ +R DL+LV+MSAT++A F +YF A
Sbjct: 1253 EPDLVGVSHLLVDEIHERGMNEDFLIIILRDLLPRRPDLRLVLMSATINAELFSKYFGEA 1312
Query: 379 PLMNIPGRTHPV 414
P+M+IPG T PV
Sbjct: 1313 PIMHIPGFTFPV 1324
>04_03_0985 - 21438036-21438116,21438373-21438495,21438903-21438995,
21439176-21439388,21439589-21439687,21440248-21440317,
21442549-21442619,21442817-21442954,21443034-21443132,
21444061-21444144,21444268-21444324,21444594-21444683,
21444886-21445026,21445778-21445882,21445962-21446114,
21446215-21446316,21446404-21446562,21447039-21447222,
21447336-21447418,21447523-21447588,21447736-21447793,
21447903-21448003,21448269-21448355,21449063-21449185,
21449285-21449364,21449857-21450066,21450159-21450270,
21450709-21450927,21451356-21451726,21451866-21451965,
21452544-21452752,21453232-21453337,21453435-21453767
Length = 1439
Score = 115 bits (276), Expect = 2e-26
Identities = 59/145 (40%), Positives = 94/145 (64%), Gaps = 9/145 (6%)
Frame = +1
Query: 7 GSKGVACTQPRRVAAMSVAQRVAEEM-DVALGQQ---VGYSIRFEDCSGPQTVLKYMTDG 174
G + CTQPRR+AA+SVA+RV+ E + + G + VGY +R + +T L + T G
Sbjct: 637 GYCSIVCTQPRRIAAISVAERVSSERCESSPGSKDSLVGYQVRLDSARNERTKLLFCTTG 696
Query: 175 MLLREAMSDPMLEQYRVILLDEAHERTLATDILMGVLKEVIKQRSD-----LKLVIMSAT 339
+LLR+ + L +++DE HERT+ D L+ VLK ++++RS+ LK+++MSAT
Sbjct: 697 ILLRKLSGNNDLSDVTHVVVDEVHERTILGDFLLIVLKSLVEKRSNQPGRKLKVILMSAT 756
Query: 340 LDAGKFQQYFDNAPLMNIPGRTHPV 414
+D+ F +YF + P++N+ GRTHPV
Sbjct: 757 VDSSLFARYFGDCPVINVEGRTHPV 781
>07_03_1304 -
25629822-25629839,25630091-25631148,25631784-25634928,
25635454-25636293
Length = 1686
Score = 111 bits (267), Expect = 3e-25
Identities = 58/140 (41%), Positives = 84/140 (60%)
Frame = +1
Query: 1 ARGSKGVACTQPRRVAAMSVAQRVAEEMDVALGQQVGYSIRFEDCSGPQTVLKYMTDGML 180
A GS + CTQPR++AA+S+A RV EE + G + F D + + Y TD L
Sbjct: 307 ANGS--IVCTQPRKIAAISLAHRVVEESNGCYGDNFVLNSTFLDHQDFSSKIIYTTDNCL 364
Query: 181 LREAMSDPMLEQYRVILLDEAHERTLATDILMGVLKEVIKQRSDLKLVIMSATLDAGKFQ 360
L M+D L+ I++DEAHER+L TD+L+ ++K+ + R DL+L+IMSAT DA +
Sbjct: 365 LHHCMNDMGLDGISYIIVDEAHERSLNTDLLLALIKKKLLDRLDLRLIIMSATADANRLA 424
Query: 361 QYFDNAPLMNIPGRTHPVEI 420
+YF + GR+ PVEI
Sbjct: 425 EYFYGCQTFYVKGRSFPVEI 444
>02_05_0672 +
30775458-30775523,30775594-30775662,30775748-30775797,
30775869-30775929,30776016-30776381,30776542-30776754,
30776826-30777056,30777502-30777615,30777703-30778495,
30778535-30778905,30779007-30779378,30779448-30780438,
30781068-30781141,30781953-30782030,30782448-30782525
Length = 1308
Score = 109 bits (263), Expect = 9e-25
Identities = 50/99 (50%), Positives = 74/99 (74%)
Frame = +1
Query: 19 VACTQPRRVAAMSVAQRVAEEMDVALGQQVGYSIRFEDCSGPQTVLKYMTDGMLLREAMS 198
+ TQPRRVA ++ A+RV+ E+ + LG++VG+ +R + G + +K+MTDG+LLRE S
Sbjct: 294 IGITQPRRVAVLATARRVSYELGLKLGKEVGFQVRHDKMVGSKCSIKFMTDGILLREVQS 353
Query: 199 DPMLEQYRVILLDEAHERTLATDILMGVLKEVIKQRSDL 315
D +L++Y VI+LDEAHER+L TDIL+G+L +IK R L
Sbjct: 354 DFLLKRYSVIILDEAHERSLNTDILIGMLSRIIKIRKSL 392
>01_06_0840 +
32343700-32344138,32345329-32345419,32345584-32345866,
32346023-32346097,32346470-32346514,32346889-32346979,
32347060-32347118,32347621-32347704,32348109-32348168,
32348585-32348637,32348724-32348757,32349334-32350335,
32350477-32351035,32351873-32352372,32352793-32353200
Length = 1260
Score = 73.7 bits (173), Expect = 7e-14
Identities = 39/111 (35%), Positives = 66/111 (59%), Gaps = 9/111 (8%)
Frame = +1
Query: 19 VACTQPRRVAAMSVAQRVAEEMDVALGQQVGYSIRFEDCSGPQTVLKYMTDGMLLREAMS 198
+ CTQPRR++A+SVA+R++ E ++G VGY IR E G + + + T+G+LLR +
Sbjct: 329 IVCTQPRRISAISVAERISAERGESVGDTVGYKIRLESKGGKNSSIMFCTNGVLLRLLIG 388
Query: 199 DPMLEQ-YRVIL--------LDEAHERTLATDILMGVLKEVIKQRSDLKLV 324
+ E Y++ L LDE HER +D ++ +L++++ L+LV
Sbjct: 389 RRIAENIYQLFLCNSERAEHLDEIHERDRFSDFMLAILRDLLPLYPHLRLV 439
>11_03_0215 +
11809068-11809300,11809872-11809964,11810976-11811193,
11812780-11812832,11813411-11813527,11814817-11814908,
11815672-11815758,11816625-11816742
Length = 336
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +1
Query: 217 YRVILLDEAHERTLATDILMGVLKEVIKQR-SDLKLVIMSATLDAGKFQQYFDNAPLMNI 393
Y + D E+T DIL+G++K +IK R SDLK++I SATLD K ++F P++NI
Sbjct: 94 YAIRFEDRTSEKTCINDILLGLMKRLIKDRASDLKVLITSATLDGLKVSKFFSGCPVLNI 153
Query: 394 PGRTHPVE 417
PG PVE
Sbjct: 154 PGTLFPVE 161
Score = 63.3 bits (147), Expect = 1e-10
Identities = 29/56 (51%), Positives = 43/56 (76%)
Frame = +1
Query: 19 VACTQPRRVAAMSVAQRVAEEMDVALGQQVGYSIRFEDCSGPQTVLKYMTDGMLLR 186
+A TQPRRVAA+SV++RVA+E+ V LG +VGY+IRFED + +T + + G++ R
Sbjct: 63 IAVTQPRRVAAVSVSRRVAQELSVPLGDEVGYAIRFEDRTSEKTCINDILLGLMKR 118
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 351 EISAVFR*CTIDEHPW*DASSGNFYTPQPERDYLEAAIRTVSQIHVCE 494
++S F C + P FY+ + +Y+E+++RT IHV E
Sbjct: 140 KVSKFFSGCPVLNIPGTLFPVEKFYSTEHPTNYIESSLRTAIDIHVKE 187
>01_01_1089 -
8560008-8560220,8560456-8560977,8561095-8561283,
8561377-8561642,8561967-8562111,8562411-8562530,
8562611-8562930,8564161-8564341,8564434-8564580,
8565186-8565497,8566303-8566450,8566592-8566765,
8567385-8567446,8567499-8567571,8567628-8567683,
8568370-8568645,8569541-8569588,8569870-8569991,
8570258-8570413,8571037-8571079,8572624-8572701,
8572972-8573070,8573168-8573209,8573302-8573304
Length = 1264
Score = 66.1 bits (154), Expect = 1e-11
Identities = 32/105 (30%), Positives = 67/105 (63%), Gaps = 2/105 (1%)
Frame = +1
Query: 61 AQRVAEEMDVALGQQVGYSIRFEDCSGPQTVLKYMTDGMLLREAMSDPMLE--QYRVILL 234
+ A+E+ +G +G+S + + ++ + + T G++L E M D + Y+VI+L
Sbjct: 326 SMHAAKEVGEEVGYHIGHS-NVSNLNSKRSRIVFKTAGVVL-EQMRDKGIAALNYKVIIL 383
Query: 235 DEAHERTLATDILMGVLKEVIKQRSDLKLVIMSATLDAGKFQQYF 369
DE HER++ +D+++ +K+ + +++DL+L++MSAT D +++ YF
Sbjct: 384 DEIHERSVESDLVLACVKQFMMKKNDLRLILMSATADITRYKDYF 428
>03_02_0587 + 9669283-9670497
Length = 404
Score = 60.1 bits (139), Expect = 1e-09
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Frame = +1
Query: 19 VACTQPRRVAAMSVAQRVAEEMDVALGQQVGYSIRFEDCSGPQTVLKYMTDGMLLREAMS 198
V C QPR +AA +V EE D I F T + + D R +
Sbjct: 60 VLCAQPRHLAAFVAMAKVGEEWDS--------DIEF-------TTTRQLLD----RFSSP 100
Query: 199 DPMLEQYRVILLDEAHERTLATDILMGVLKEVIKQRSDL----KLVIMSATLDA-GKFQQ 363
P+L Y +++DEAH+RTL TD+L+G++K + + + K+V+ +A A G
Sbjct: 101 APVLAGYGAVVIDEAHDRTLGTDVLLGMVKAALATGTTMGGRCKVVVCTAGGPADGMLSA 160
Query: 364 YFDNAPLMNIPGRTHPVEI 420
+F AP+++IP H VE+
Sbjct: 161 FFGGAPVVSIPRAAHQVEV 179
>01_01_0788 +
6111890-6112002,6112121-6112265,6113012-6113086,
6114171-6114250,6115500-6115569,6115664-6115759,
6116633-6116756,6116921-6116967,6117044-6117127,
6117199-6117252,6117451-6117551,6118744-6118834,
6119989-6120153,6121341-6121412,6122025-6122111,
6122899-6122952,6122992-6123062,6123882-6124029
Length = 558
Score = 39.1 bits (87), Expect(2) = 3e-05
Identities = 14/25 (56%), Positives = 22/25 (88%)
Frame = +1
Query: 148 TVLKYMTDGMLLREAMSDPMLEQYR 222
T++K++TDG+L+RE M DP+L +YR
Sbjct: 114 TMIKFLTDGVLIREMMEDPLLTKYR 138
Score = 25.4 bits (53), Expect(2) = 3e-05
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 1 ARGSKGVACTQPRRVAAMSV 60
A G + + CTQPRR+A +
Sbjct: 94 AEGGRLIGCTQPRRLAVQGM 113
>11_01_0601 + 4783354-4783691,4784037-4784151,4784202-4784315
Length = 188
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 423 YTPQPERDYLEAAIRTVSQIHVCE 494
Y P+P DYL AA+ V +IH E
Sbjct: 65 YLPEPVTDYLGAAVDAVCRIHTTE 88
>07_01_1146 +
10756897-10757065,10763869-10765521,10765638-10765900,
10766057-10766266,10766818-10767036,10767379-10768344,
10768575-10768670,10768772-10768870,10769349-10769538,
10769623-10769855
Length = 1365
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 70 VAEEMDVALGQQVGYSIRFEDCSGPQTVLKYMTDGM 177
+AE ALG + + R+ D + Q V++Y TDG+
Sbjct: 684 IAEFAGQALGVVIAETQRYADMAAKQAVVEYTTDGL 719
>09_06_0204 -
21559024-21559287,21559445-21559567,21559665-21559718,
21559800-21560721,21560803-21561212,21561284-21561408,
21561524-21561571,21561668-21561789,21562008-21562099,
21562242-21562429,21562582-21562696,21562780-21562863,
21562994-21563087,21563393-21563510,21563805-21563930,
21564002-21564074,21564209-21564296,21564674-21564744,
21564839-21564918,21565004-21565065,21565169-21565310,
21565410-21565510,21565600-21565644,21565725-21565789,
21566088-21566163,21566246-21566300,21566416-21566773
Length = 1366
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -2
Query: 412 LDASYQGCSSMVHYRNTAEISQHPRLQ 332
LD S QGC Y+N ++S+HP LQ
Sbjct: 189 LDDSAQGCPE---YKNAQKLSRHPSLQ 212
>12_02_1238 -
27246769-27246948,27247030-27247104,27247848-27247959,
27248213-27248295,27248544-27248791,27249448-27249533,
27250131-27250210,27250310-27250480,27250998-27251099,
27251591-27251743,27252459-27252575,27252715-27252804,
27253057-27253196,27253339-27253396,27253931-27254010,
27254215-27254349,27254482-27254646,27254982-27255021
Length = 704
Score = 27.5 bits (58), Expect = 6.3
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +1
Query: 235 DEAHERTLATDILMGVLKEVIKQRSDLKLVIMSA-TLDAGKFQQYFDNAPLMNIPGRTHP 411
D HER L K+ S+L V+MS+ TL+ K DN PL ++P R +
Sbjct: 95 DIHHEREGNITFLHSAAKKGFPATSNLHSVMMSSLTLNVEKNA---DNTPLKHVPPRVNC 151
Query: 412 VEISTLRNRKGIIWKLLL 465
R + I KLLL
Sbjct: 152 SFCVLFRTGRTEIVKLLL 169
>09_04_0434 - 17533633-17534637
Length = 334
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 228 IAG*GSRENISDRHPHGCLKGGHKAAFRFEAGYYVCNL 341
+AG G+ N+S RHP + G AA F Y + +L
Sbjct: 142 LAGTGAVANVSLRHPSPGVPGSAPAAIVFHGRYEILSL 179
>12_01_0002 - 4477-6144,6571-7440
Length = 845
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 143 GPEQSSKRMLYPTCWPRATSISSATLCAT 57
G E + ML CWP +ISS +C T
Sbjct: 331 GMEMACTHMLQQPCWPNTNTISS--ICTT 357
>11_01_0003 - 6099-7766,8193-9062
Length = 845
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 143 GPEQSSKRMLYPTCWPRATSISSATLCAT 57
G E + ML CWP +ISS +C T
Sbjct: 331 GMEMACTHMLQQPCWPNTNTISS--ICTT 357
>07_03_0158 + 14552665-14554209
Length = 514
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 19 VACTQPRRVAAMSVAQRVAEEMDVALGQQV-GYSIR 123
+ P R+A +SV V D+A G+QV G+++R
Sbjct: 260 IGAVLPNRIALISVLSAVEALTDLAAGKQVHGFAVR 295
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,070,888
Number of Sequences: 37544
Number of extensions: 280912
Number of successful extensions: 820
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1035514020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -