Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_P11
(494 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 23 1.8
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 1.8
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 4.1
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 4.1
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 4.1
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 4.1
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 4.1
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 4.1
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 9.5
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 9.5
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 21 9.5
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 23.0 bits (47), Expect = 1.8
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 426 TPQPERDYLEAAIRTVSQI 482
T QP + L A+RT SQI
Sbjct: 740 TAQPRMERLAEAVRTASQI 758
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 23.0 bits (47), Expect = 1.8
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 491 ANMNLRHSPNSSFQIIPFRLRSVEISTGCVL 399
AN+N SPNS+ + P + R +T V+
Sbjct: 775 ANVNKEQSPNSTKETTPKKERKTATTTQPVI 805
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 4.1
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +3
Query: 18 SRLHSTQASGSHVRSTESC*RNGRR 92
SR H Q + SH SC R+ R
Sbjct: 219 SRTHGFQHTSSHYSRERSCSRDRNR 243
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 4.1
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +3
Query: 18 SRLHSTQASGSHVRSTESC*RNGRR 92
SR H Q + SH SC R+ R
Sbjct: 219 SRTHGFQHTSSHYSRERSCSRDRNR 243
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 4.1
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +3
Query: 18 SRLHSTQASGSHVRSTESC*RNGRR 92
SR H Q + SH SC R+ R
Sbjct: 219 SRTHGFQHTSSHYSRERSCSRDRNR 243
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 4.1
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +3
Query: 18 SRLHSTQASGSHVRSTESC*RNGRR 92
SR H Q + SH SC R+ R
Sbjct: 219 SRTHGFQHTSSHYSRERSCSRDRNR 243
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 4.1
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +3
Query: 18 SRLHSTQASGSHVRSTESC*RNGRR 92
SR H Q + SH SC R+ R
Sbjct: 208 SRTHGFQHTSSHYSRERSCSRDRNR 232
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.8 bits (44), Expect = 4.1
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +3
Query: 18 SRLHSTQASGSHVRSTESC*RNGRR 92
SR H Q + SH SC R+ R
Sbjct: 219 SRTHGFQHTSSHYSRERSCSRDRNR 243
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 20.6 bits (41), Expect = 9.5
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = +3
Query: 321 GYYVCNLGCW 350
GY C L CW
Sbjct: 101 GYATCVLSCW 110
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 20.6 bits (41), Expect = 9.5
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = +3
Query: 321 GYYVCNLGCW 350
GY C L CW
Sbjct: 154 GYATCVLSCW 163
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 20.6 bits (41), Expect = 9.5
Identities = 14/68 (20%), Positives = 29/68 (42%)
Frame = +1
Query: 37 RRVAAMSVAQRVAEEMDVALGQQVGYSIRFEDCSGPQTVLKYMTDGMLLREAMSDPMLEQ 216
++ + Q A ++ L + G+ DC+ + V + + + M+D +E
Sbjct: 1043 KKTYVQDLIQAEASQIYDMLVYEGGHFYVCGDCTMAEDVYQTLKHIIQTHGEMTDKQVEA 1102
Query: 217 YRVILLDE 240
Y + L DE
Sbjct: 1103 YMLSLRDE 1110
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,850
Number of Sequences: 438
Number of extensions: 2958
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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