Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_P09
(372 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC059362-1|AAH59362.1| 902|Homo sapiens RALGDS protein protein. 29 3.6
AL162417-12|CAI13417.1| 859|Homo sapiens ral guanine nucleotide... 29 3.6
AL162417-11|CAI13415.1| 914|Homo sapiens ral guanine nucleotide... 29 3.6
AL162417-10|CAI13416.1| 902|Homo sapiens ral guanine nucleotide... 29 3.6
AK127524-1|BAC87018.1| 913|Homo sapiens protein ( Homo sapiens ... 29 3.6
AK074114-1|BAB84940.1| 824|Homo sapiens FLJ00185 protein protein. 29 3.6
AF295773-1|AAG02122.1| 914|Homo sapiens ral guanine nucleotide ... 29 3.6
AF027169-1|AAQ13414.1| 859|Homo sapiens Ral guanine nucleotide ... 29 3.6
D88152-1|BAA20072.1| 549|Homo sapiens acetyl-coenzyme A transpo... 29 6.3
BC014416-1|AAH14416.1| 549|Homo sapiens SLC33A1 protein protein. 29 6.3
>BC059362-1|AAH59362.1| 902|Homo sapiens RALGDS protein protein.
Length = 902
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +1
Query: 16 LKDLSVRLIKLFSDFFLEYVIVFLLCYIRINVCGGILSLLFKGY 147
L+ L L+ F L YV +FL Y +L LLFK Y
Sbjct: 121 LEKLVEHLVPAFQGSDLSYVTIFLCTYRAFTTTQQVLDLLFKRY 164
>AL162417-12|CAI13417.1| 859|Homo sapiens ral guanine nucleotide
dissociation stimulator protein.
Length = 859
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +1
Query: 16 LKDLSVRLIKLFSDFFLEYVIVFLLCYIRINVCGGILSLLFKGY 147
L+ L L+ F L YV +FL Y +L LLFK Y
Sbjct: 66 LEKLVEHLVPAFQGSDLSYVTIFLCTYRAFTTTQQVLDLLFKRY 109
>AL162417-11|CAI13415.1| 914|Homo sapiens ral guanine nucleotide
dissociation stimulator protein.
Length = 914
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +1
Query: 16 LKDLSVRLIKLFSDFFLEYVIVFLLCYIRINVCGGILSLLFKGY 147
L+ L L+ F L YV +FL Y +L LLFK Y
Sbjct: 121 LEKLVEHLVPAFQGSDLSYVTIFLCTYRAFTTTQQVLDLLFKRY 164
>AL162417-10|CAI13416.1| 902|Homo sapiens ral guanine nucleotide
dissociation stimulator protein.
Length = 902
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +1
Query: 16 LKDLSVRLIKLFSDFFLEYVIVFLLCYIRINVCGGILSLLFKGY 147
L+ L L+ F L YV +FL Y +L LLFK Y
Sbjct: 121 LEKLVEHLVPAFQGSDLSYVTIFLCTYRAFTTTQQVLDLLFKRY 164
>AK127524-1|BAC87018.1| 913|Homo sapiens protein ( Homo sapiens
cDNA FLJ45617 fis, clone BRTHA3026916, highly similar
to Ral guanine nucleotide dissociation stimulator. ).
Length = 913
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +1
Query: 16 LKDLSVRLIKLFSDFFLEYVIVFLLCYIRINVCGGILSLLFKGY 147
L+ L L+ F L YV +FL Y +L LLFK Y
Sbjct: 120 LEKLVEHLVPAFQGSDLSYVTIFLCTYRAFTTTQQVLDLLFKRY 163
>AK074114-1|BAB84940.1| 824|Homo sapiens FLJ00185 protein protein.
Length = 824
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +1
Query: 16 LKDLSVRLIKLFSDFFLEYVIVFLLCYIRINVCGGILSLLFKGY 147
L+ L L+ F L YV +FL Y +L LLFK Y
Sbjct: 121 LEKLVEHLVPAFQGSDLSYVTIFLCTYRAFTTTQQVLDLLFKRY 164
>AF295773-1|AAG02122.1| 914|Homo sapiens ral guanine nucleotide
dissociation stimulator protein.
Length = 914
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +1
Query: 16 LKDLSVRLIKLFSDFFLEYVIVFLLCYIRINVCGGILSLLFKGY 147
L+ L L+ F L YV +FL Y +L LLFK Y
Sbjct: 121 LEKLVEHLVPAFQGSDLSYVTIFLCTYRAFTTTQQVLDLLFKRY 164
>AF027169-1|AAQ13414.1| 859|Homo sapiens Ral guanine nucleotide
dissociation stimulator A protein.
Length = 859
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +1
Query: 16 LKDLSVRLIKLFSDFFLEYVIVFLLCYIRINVCGGILSLLFKGY 147
L+ L L+ F L YV +FL Y +L LLFK Y
Sbjct: 66 LEKLVEHLVPAFQGSDLSYVTIFLCTYRAFTTTQQVLDLLFKRY 109
>D88152-1|BAA20072.1| 549|Homo sapiens acetyl-coenzyme A
transporter protein.
Length = 549
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +2
Query: 155 CQK*L*FSPHRSNLLQAYDKAFIWLKVFI--TTLNIIFIKVNTVSV 286
C K L F P ++ D F W VF+ TTL + K N VSV
Sbjct: 241 CNKYLRFQPQPRGIVTLSDFLFFWGTVFLITTTLVALLKKENEVSV 286
>BC014416-1|AAH14416.1| 549|Homo sapiens SLC33A1 protein protein.
Length = 549
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +2
Query: 155 CQK*L*FSPHRSNLLQAYDKAFIWLKVFI--TTLNIIFIKVNTVSV 286
C K L F P ++ D F W VF+ TTL + K N VSV
Sbjct: 241 CNKYLRFQPQPRGIVTLSDFLFFWGTVFLITTTLVALLKKENEVSV 286
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,240,534
Number of Sequences: 237096
Number of extensions: 890819
Number of successful extensions: 4897
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4897
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2421480012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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