Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_P09
         (372 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1110|AAN12092.3|  406|Drosophila melanogaster CG32402-P...    28   3.4  
AY118591-1|AAM49960.1| 1145|Drosophila melanogaster LD45339p pro...    27   7.9  
AE014297-1957|AAF55143.1| 1145|Drosophila melanogaster CG6623-PA...    27   7.9  

>AE014296-1110|AAN12092.3|  406|Drosophila melanogaster CG32402-PA
           protein.
          Length = 406

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +1

Query: 13  NLKDLSVRLIKLFSDFFLEYVIVFLLCYIRINVC 114
           +L  +S  +I LF  +F  Y + +LLC   +++C
Sbjct: 190 SLHPISHAIIYLFQSYFAVYCLTWLLCIEGLSIC 223


>AY118591-1|AAM49960.1| 1145|Drosophila melanogaster LD45339p protein.
          Length = 1145

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 18/77 (23%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
 Frame = -2

Query: 236  KPLTI*RLYRTLVTNLIYEGKIITISGNPIYPLNSKLSIPPQTFILI*QSKNT---ITYS 66
            KP +    ++TL+  ++    +    G+ I+P ++K+++     + I Q++NT     Y+
Sbjct: 777  KPASATLEFKTLIAGIVQPISLNVSGGSFIFPPDAKITLRCSKNLRIRQARNTDDEAAYN 836

Query: 65   KKKSENSFIRRTLKSFK 15
              +S  S ++  L  FK
Sbjct: 837  DDQSFESTLQVPLVQFK 853


>AE014297-1957|AAF55143.1| 1145|Drosophila melanogaster CG6623-PA
            protein.
          Length = 1145

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 18/77 (23%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
 Frame = -2

Query: 236  KPLTI*RLYRTLVTNLIYEGKIITISGNPIYPLNSKLSIPPQTFILI*QSKNT---ITYS 66
            KP +    ++TL+  ++    +    G+ I+P ++K+++     + I Q++NT     Y+
Sbjct: 777  KPASATLEFKTLIAGIVQPISLNVSGGSFIFPPDAKITLRCSKNLRIRQARNTDDEAAYN 836

Query: 65   KKKSENSFIRRTLKSFK 15
              +S  S ++  L  FK
Sbjct: 837  DDQSFESTLQVPLVQFK 853


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,608,766
Number of Sequences: 53049
Number of extensions: 260928
Number of successful extensions: 556
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 556
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 984962268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)