Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_P05
(511 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X97064-1|CAA65774.1| 765|Homo sapiens Sec23 protein protein. 56 9e-08
BC036649-1|AAH36649.1| 765|Homo sapiens Sec23 homolog A (S. cer... 56 9e-08
X97065-1|CAA65775.1| 767|Homo sapiens Sec23 protein protein. 53 5e-07
BC095404-1|AAH95404.1| 767|Homo sapiens Sec23 homolog B (S. cer... 53 5e-07
BC005404-1|AAH05404.1| 767|Homo sapiens SEC23B protein protein. 53 5e-07
BC005032-1|AAH05032.1| 767|Homo sapiens Sec23 homolog B (S. cer... 53 5e-07
AL121900-4|CAH73150.1| 246|Homo sapiens Sec23 homolog B (S. cer... 53 5e-07
AL121900-3|CAH73149.1| 767|Homo sapiens Sec23 homolog B (S. cer... 53 5e-07
AL121893-10|CAI12514.1| 246|Homo sapiens Sec23 homolog B (S. ce... 53 5e-07
AL121893-8|CAI12512.1| 767|Homo sapiens Sec23 homolog B (S. cer... 53 5e-07
AB028949-1|BAA82978.1| 519|Homo sapiens KIAA1026 protein protein. 30 4.1
DQ063585-1|AAY64450.1| 1517|Homo sapiens B-aggressive lymphoma 2... 30 5.4
DQ063584-1|AAY64449.1| 1638|Homo sapiens B-aggressive lymphoma 2... 30 5.4
BC032804-1|AAH32804.1| 270|Homo sapiens PARP14 protein protein. 30 5.4
AK022542-1|BAB14089.1| 419|Homo sapiens protein ( Homo sapiens ... 30 5.4
AK001770-1|BAA91897.1| 556|Homo sapiens protein ( Homo sapiens ... 30 5.4
AB033094-1|BAA86582.1| 1023|Homo sapiens KIAA1268 protein protein. 30 5.4
Y09218-1|CAA70419.1| 180|Homo sapiens human leukocyte antigen, ... 29 7.1
X60108-1|CAA42702.1| 365|Homo sapiens HLA-A2902 protein. 29 7.1
U83415-1|AAB53373.1| 365|Homo sapiens MHC class I antigen protein. 29 7.1
M23739-1|AAB47873.1| 365|Homo sapiens major histocompatibility ... 29 7.1
EF656472-1|ABS18723.1| 181|Homo sapiens MHC class I antigen pro... 29 7.1
DQ494177-1|ABF54964.1| 181|Homo sapiens MHC class I antigen pro... 29 7.1
DQ417099-1|ABE00934.1| 181|Homo sapiens MHC class I antigen pro... 29 7.1
AY826755-1|AAW81983.1| 181|Homo sapiens MHC class I antigen pro... 29 7.1
AY623048-1|AAT35597.1| 298|Homo sapiens MHC class I antigen pro... 29 7.1
AY229984-1|AAO74628.1| 181|Homo sapiens MHC class I antigen pro... 29 7.1
AY216267-1|AAO53231.1| 181|Homo sapiens MHC class I antigen pro... 29 7.1
AY062006-1|AAL38666.1| 181|Homo sapiens MHC class I antigen pro... 29 7.1
AY042685-1|AAK94511.1| 181|Homo sapiens MHC class I antigen pro... 29 7.1
AM410904-1|CAL69123.1| 181|Homo sapiens MHC class I antigen pro... 29 7.1
AJ629870-1|CAF33598.1| 181|Homo sapiens MHC class I antigen pro... 29 7.1
AJ580596-1|CAE45179.1| 181|Homo sapiens MHC class I antigen pro... 29 7.1
AJ575096-1|CAE00637.1| 181|Homo sapiens MHC class I antigen pro... 29 7.1
AJ303359-1|CAC27518.1| 365|Homo sapiens MHC class I antigen pro... 29 7.1
AJ000661-1|CAA04209.1| 365|Homo sapiens HLA-A29 variant protein. 29 7.1
U78554-1|AAC51344.1| 644|Homo sapiens mucin protein. 29 9.4
AJ606924-1|CAE54950.1| 89|Homo sapiens MHC class I antigen pro... 29 9.4
AJ506194-1|CAD44640.1| 181|Homo sapiens MHC class I antigen pro... 29 9.4
>X97064-1|CAA65774.1| 765|Homo sapiens Sec23 protein protein.
Length = 765
Score = 55.6 bits (128), Expect = 9e-08
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +3
Query: 123 QDGGAPVLTDDVSLQVFMEHLKKLAVSSTA 212
Q+ GAP+LTDDVSLQVFM+HLKKLAVSS A
Sbjct: 736 QESGAPILTDDVSLQVFMDHLKKLAVSSAA 765
>BC036649-1|AAH36649.1| 765|Homo sapiens Sec23 homolog A (S.
cerevisiae) protein.
Length = 765
Score = 55.6 bits (128), Expect = 9e-08
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +3
Query: 123 QDGGAPVLTDDVSLQVFMEHLKKLAVSSTA 212
Q+ GAP+LTDDVSLQVFM+HLKKLAVSS A
Sbjct: 736 QESGAPILTDDVSLQVFMDHLKKLAVSSAA 765
>X97065-1|CAA65775.1| 767|Homo sapiens Sec23 protein protein.
Length = 767
Score = 53.2 bits (122), Expect = 5e-07
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +3
Query: 123 QDGGAPVLTDDVSLQVFMEHLKKLAVSS 206
Q+ GAP+LTDDVSLQVFM+HLKKLAVSS
Sbjct: 738 QETGAPILTDDVSLQVFMDHLKKLAVSS 765
>BC095404-1|AAH95404.1| 767|Homo sapiens Sec23 homolog B (S.
cerevisiae) protein.
Length = 767
Score = 53.2 bits (122), Expect = 5e-07
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +3
Query: 123 QDGGAPVLTDDVSLQVFMEHLKKLAVSS 206
Q+ GAP+LTDDVSLQVFM+HLKKLAVSS
Sbjct: 738 QETGAPILTDDVSLQVFMDHLKKLAVSS 765
>BC005404-1|AAH05404.1| 767|Homo sapiens SEC23B protein protein.
Length = 767
Score = 53.2 bits (122), Expect = 5e-07
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +3
Query: 123 QDGGAPVLTDDVSLQVFMEHLKKLAVSS 206
Q+ GAP+LTDDVSLQVFM+HLKKLAVSS
Sbjct: 738 QETGAPILTDDVSLQVFMDHLKKLAVSS 765
>BC005032-1|AAH05032.1| 767|Homo sapiens Sec23 homolog B (S.
cerevisiae) protein.
Length = 767
Score = 53.2 bits (122), Expect = 5e-07
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +3
Query: 123 QDGGAPVLTDDVSLQVFMEHLKKLAVSS 206
Q+ GAP+LTDDVSLQVFM+HLKKLAVSS
Sbjct: 738 QETGAPILTDDVSLQVFMDHLKKLAVSS 765
>AL121900-4|CAH73150.1| 246|Homo sapiens Sec23 homolog B (S.
cerevisiae) protein.
Length = 246
Score = 53.2 bits (122), Expect = 5e-07
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +3
Query: 123 QDGGAPVLTDDVSLQVFMEHLKKLAVSS 206
Q+ GAP+LTDDVSLQVFM+HLKKLAVSS
Sbjct: 217 QETGAPILTDDVSLQVFMDHLKKLAVSS 244
>AL121900-3|CAH73149.1| 767|Homo sapiens Sec23 homolog B (S.
cerevisiae) protein.
Length = 767
Score = 53.2 bits (122), Expect = 5e-07
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +3
Query: 123 QDGGAPVLTDDVSLQVFMEHLKKLAVSS 206
Q+ GAP+LTDDVSLQVFM+HLKKLAVSS
Sbjct: 738 QETGAPILTDDVSLQVFMDHLKKLAVSS 765
>AL121893-10|CAI12514.1| 246|Homo sapiens Sec23 homolog B (S.
cerevisiae) protein.
Length = 246
Score = 53.2 bits (122), Expect = 5e-07
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +3
Query: 123 QDGGAPVLTDDVSLQVFMEHLKKLAVSS 206
Q+ GAP+LTDDVSLQVFM+HLKKLAVSS
Sbjct: 217 QETGAPILTDDVSLQVFMDHLKKLAVSS 244
>AL121893-8|CAI12512.1| 767|Homo sapiens Sec23 homolog B (S.
cerevisiae) protein.
Length = 767
Score = 53.2 bits (122), Expect = 5e-07
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +3
Query: 123 QDGGAPVLTDDVSLQVFMEHLKKLAVSS 206
Q+ GAP+LTDDVSLQVFM+HLKKLAVSS
Sbjct: 738 QETGAPILTDDVSLQVFMDHLKKLAVSS 765
>AB028949-1|BAA82978.1| 519|Homo sapiens KIAA1026 protein protein.
Length = 519
Score = 30.3 bits (65), Expect = 4.1
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 7 GEYSSFSAISFYIKHWLFGGKGITCLLVLCYG 102
GE S S +SF K W++G KG+ + LC G
Sbjct: 487 GECISCSVLSFCKKRWMWGEKGMRPVCSLCPG 518
>DQ063585-1|AAY64450.1| 1517|Homo sapiens B-aggressive lymphoma 2A
protein.
Length = 1517
Score = 29.9 bits (64), Expect = 5.4
Identities = 12/51 (23%), Positives = 27/51 (52%)
Frame = -1
Query: 421 LPITRTIQRSSRDVDQSDLRARTLHSQGHLSRCLTGTLKWYYNENDCQN*F 269
L I+R + ++ +++ R R Q + C++ ++W YN+N+ + F
Sbjct: 1335 LGISRDVMQARDEIEAMIKRVRLAKEQESRADCISEFIEWQYNDNNTSHCF 1385
>DQ063584-1|AAY64449.1| 1638|Homo sapiens B-aggressive lymphoma 2B
protein.
Length = 1638
Score = 29.9 bits (64), Expect = 5.4
Identities = 12/51 (23%), Positives = 27/51 (52%)
Frame = -1
Query: 421 LPITRTIQRSSRDVDQSDLRARTLHSQGHLSRCLTGTLKWYYNENDCQN*F 269
L I+R + ++ +++ R R Q + C++ ++W YN+N+ + F
Sbjct: 1335 LGISRDVMQARDEIEAMIKRVRLAKEQESRADCISEFIEWQYNDNNTSHCF 1385
>BC032804-1|AAH32804.1| 270|Homo sapiens PARP14 protein protein.
Length = 270
Score = 29.9 bits (64), Expect = 5.4
Identities = 12/51 (23%), Positives = 27/51 (52%)
Frame = -1
Query: 421 LPITRTIQRSSRDVDQSDLRARTLHSQGHLSRCLTGTLKWYYNENDCQN*F 269
L I+R + ++ +++ R R Q + C++ ++W YN+N+ + F
Sbjct: 89 LGISRDVMQARDEIEAMIKRVRLAKEQESRADCISEFIEWQYNDNNTSHCF 139
>AK022542-1|BAB14089.1| 419|Homo sapiens protein ( Homo sapiens
cDNA FLJ12480 fis, clone NT2RM1001066. ).
Length = 419
Score = 29.9 bits (64), Expect = 5.4
Identities = 12/51 (23%), Positives = 27/51 (52%)
Frame = -1
Query: 421 LPITRTIQRSSRDVDQSDLRARTLHSQGHLSRCLTGTLKWYYNENDCQN*F 269
L I+R + ++ +++ R R Q + C++ ++W YN+N+ + F
Sbjct: 116 LGISRDVMQARDEIEAMIKRVRLAKEQESRADCISEFIEWQYNDNNTSHCF 166
>AK001770-1|BAA91897.1| 556|Homo sapiens protein ( Homo sapiens
cDNA FLJ10908 fis, clone OVARC1000087, weakly similar to
HISTONE MACRO-H2A.1. ).
Length = 556
Score = 29.9 bits (64), Expect = 5.4
Identities = 12/51 (23%), Positives = 27/51 (52%)
Frame = -1
Query: 421 LPITRTIQRSSRDVDQSDLRARTLHSQGHLSRCLTGTLKWYYNENDCQN*F 269
L I+R + ++ +++ R R Q + C++ ++W YN+N+ + F
Sbjct: 494 LGISRDVMQARDEIEAMIKRVRLAKEQESRADCISEFIEWQYNDNNTSHCF 544
>AB033094-1|BAA86582.1| 1023|Homo sapiens KIAA1268 protein protein.
Length = 1023
Score = 29.9 bits (64), Expect = 5.4
Identities = 12/51 (23%), Positives = 27/51 (52%)
Frame = -1
Query: 421 LPITRTIQRSSRDVDQSDLRARTLHSQGHLSRCLTGTLKWYYNENDCQN*F 269
L I+R + ++ +++ R R Q + C++ ++W YN+N+ + F
Sbjct: 841 LGISRDVMQARDEIEAMIKRVRLAKEQESRADCISEFIEWQYNDNNTSHCF 891
>Y09218-1|CAA70419.1| 180|Homo sapiens human leukocyte antigen,
HLA-A*29 variant protein.
Length = 180
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 370 DLRARTLHSQGHLSRCLTGTLKWYYNENDCQN*FKTIIILY 248
DL+ R + +Q R GTL+ YYN+++ + TI ++Y
Sbjct: 59 DLQTRNVKAQSQTDRANLGTLRGYYNQSEAGS--HTIQMMY 97
>X60108-1|CAA42702.1| 365|Homo sapiens HLA-A2902 protein.
Length = 365
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 370 DLRARTLHSQGHLSRCLTGTLKWYYNENDCQN*FKTIIILY 248
DL+ R + +Q R GTL+ YYN+++ + TI ++Y
Sbjct: 85 DLQTRNVKAQSQTDRANLGTLRGYYNQSEAGS--HTIQMMY 123
>U83415-1|AAB53373.1| 365|Homo sapiens MHC class I antigen protein.
Length = 365
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 370 DLRARTLHSQGHLSRCLTGTLKWYYNENDCQN*FKTIIILY 248
DL+ R + +Q R GTL+ YYN+++ + TI ++Y
Sbjct: 85 DLQTRNVKAQSQTDRANLGTLRGYYNQSEAGS--HTIQMMY 123
>M23739-1|AAB47873.1| 365|Homo sapiens major histocompatibility
complex class I protein.
Length = 365
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 370 DLRARTLHSQGHLSRCLTGTLKWYYNENDCQN*FKTIIILY 248
DL+ R + +Q R GTL+ YYN+++ + TI ++Y
Sbjct: 85 DLQTRNVKAQSQTDRANLGTLRGYYNQSEAGS--HTIQMMY 123
>EF656472-1|ABS18723.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 370 DLRARTLHSQGHLSRCLTGTLKWYYNENDCQN*FKTIIILY 248
DL+ R + +Q R GTL+ YYN+++ + TI ++Y
Sbjct: 60 DLQTRNVKAQSQTDRANLGTLRGYYNQSEAGS--HTIQMMY 98
>DQ494177-1|ABF54964.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 370 DLRARTLHSQGHLSRCLTGTLKWYYNENDCQN*FKTIIILY 248
DL+ R + +Q R GTL+ YYN+++ + TI ++Y
Sbjct: 60 DLQTRNVKAQSQTDRANLGTLRGYYNQSEAGS--HTIQMMY 98
>DQ417099-1|ABE00934.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 370 DLRARTLHSQGHLSRCLTGTLKWYYNENDCQN*FKTIIILY 248
DL+ R + +Q R GTL+ YYN+++ + TI ++Y
Sbjct: 60 DLQTRNVKAQSQTDRANLGTLRGYYNQSEAGS--HTIQMMY 98
>AY826755-1|AAW81983.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 370 DLRARTLHSQGHLSRCLTGTLKWYYNENDCQN*FKTIIILY 248
DL+ R + +Q R GTL+ YYN+++ + TI ++Y
Sbjct: 60 DLQTRNVKAQSQTDRANLGTLRGYYNQSEAGS--HTIQMMY 98
>AY623048-1|AAT35597.1| 298|Homo sapiens MHC class I antigen
protein.
Length = 298
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 370 DLRARTLHSQGHLSRCLTGTLKWYYNENDCQN*FKTIIILY 248
DL+ R + +Q R GTL+ YYN+++ + TI ++Y
Sbjct: 85 DLQTRNVKAQSQTDRANLGTLRGYYNQSEAGS--HTIQMMY 123
>AY229984-1|AAO74628.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 370 DLRARTLHSQGHLSRCLTGTLKWYYNENDCQN*FKTIIILY 248
DL+ R + +Q R GTL+ YYN+++ + TI ++Y
Sbjct: 60 DLQTRNVKAQSQTDRANLGTLRGYYNQSEAGS--HTIQMMY 98
>AY216267-1|AAO53231.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 370 DLRARTLHSQGHLSRCLTGTLKWYYNENDCQN*FKTIIILY 248
DL+ R + +Q R GTL+ YYN+++ + TI ++Y
Sbjct: 60 DLQTRNVKAQSQTDRANLGTLRGYYNQSEAGS--HTIQMMY 98
>AY062006-1|AAL38666.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 370 DLRARTLHSQGHLSRCLTGTLKWYYNENDCQN*FKTIIILY 248
DL+ R + +Q R GTL+ YYN+++ + TI ++Y
Sbjct: 60 DLQTRNVKAQSQTDRANLGTLRGYYNQSEAGS--HTIQMMY 98
>AY042685-1|AAK94511.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 370 DLRARTLHSQGHLSRCLTGTLKWYYNENDCQN*FKTIIILY 248
DL+ R + +Q R GTL+ YYN+++ + TI ++Y
Sbjct: 60 DLQTRNVKAQSQTDRANLGTLRGYYNQSEAGS--HTIQMMY 98
>AM410904-1|CAL69123.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 370 DLRARTLHSQGHLSRCLTGTLKWYYNENDCQN*FKTIIILY 248
DL+ R + +Q R GTL+ YYN+++ + TI ++Y
Sbjct: 60 DLQTRNVKAQSQTDRANLGTLRGYYNQSEAGS--HTIQMMY 98
>AJ629870-1|CAF33598.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 370 DLRARTLHSQGHLSRCLTGTLKWYYNENDCQN*FKTIIILY 248
DL+ R + +Q R GTL+ YYN+++ + TI ++Y
Sbjct: 60 DLQTRNVKAQSQTDRANLGTLRGYYNQSEAGS--HTIQMMY 98
>AJ580596-1|CAE45179.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 370 DLRARTLHSQGHLSRCLTGTLKWYYNENDCQN*FKTIIILY 248
DL+ R + +Q R GTL+ YYN+++ + TI ++Y
Sbjct: 60 DLQTRNVKAQSQTDRANLGTLRGYYNQSEAGS--HTIQMMY 98
>AJ575096-1|CAE00637.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 370 DLRARTLHSQGHLSRCLTGTLKWYYNENDCQN*FKTIIILY 248
DL+ R + +Q R GTL+ YYN+++ + TI ++Y
Sbjct: 60 DLQTRNVKAQSQTDRANLGTLRGYYNQSEAGS--HTIQMMY 98
>AJ303359-1|CAC27518.1| 365|Homo sapiens MHC class I antigen
protein.
Length = 365
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 370 DLRARTLHSQGHLSRCLTGTLKWYYNENDCQN*FKTIIILY 248
DL+ R + +Q R GTL+ YYN+++ + TI ++Y
Sbjct: 85 DLQTRNVKAQSQTDRANLGTLRGYYNQSEAGS--HTIQMMY 123
>AJ000661-1|CAA04209.1| 365|Homo sapiens HLA-A29 variant protein.
Length = 365
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 370 DLRARTLHSQGHLSRCLTGTLKWYYNENDCQN*FKTIIILY 248
DL+ R + +Q R GTL+ YYN+++ + TI ++Y
Sbjct: 85 DLQTRNVKAQSQTDRANLGTLRGYYNQSEAGS--HTIQMMY 123
>U78554-1|AAC51344.1| 644|Homo sapiens mucin protein.
Length = 644
Score = 29.1 bits (62), Expect = 9.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 306 LSVPVKHLDK*P*LCRVRALRSDWSTSREDLC 401
L VP + L++ LCR R + SDW + LC
Sbjct: 545 LEVPCQSLERYAELCRARGVCSDWRGATGGLC 576
>AJ606924-1|CAE54950.1| 89|Homo sapiens MHC class I antigen
protein.
Length = 89
Score = 29.1 bits (62), Expect = 9.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 370 DLRARTLHSQGHLSRCLTGTLKWYYNEND 284
DL+ R + +Q R GTL+ YYN+++
Sbjct: 60 DLQTRNVKAQSQTDRANLGTLRGYYNQSE 88
>AJ506194-1|CAD44640.1| 181|Homo sapiens MHC class I antigen
protein.
Length = 181
Score = 29.1 bits (62), Expect = 9.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 370 DLRARTLHSQGHLSRCLTGTLKWYYNEND 284
DL+ R + +Q R GTL+ YYN+++
Sbjct: 60 DLQTRNVKAQSQTDRANLGTLRGYYNQSE 88
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,592,093
Number of Sequences: 237096
Number of extensions: 1368112
Number of successful extensions: 2879
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 2847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2879
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4763295768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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