Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_P05
         (511 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001619-1|AAN71374.1|  773|Drosophila melanogaster RE35250p pro...    59   3e-09
AJ276482-1|CAB81549.1|  769|Drosophila melanogaster putative Sec...    59   3e-09
AE014297-319|AAF51979.2|  773|Drosophila melanogaster CG1250-PB,...    59   3e-09
AE014297-318|AAF51978.2|  773|Drosophila melanogaster CG1250-PA,...    59   3e-09
AE013599-3815|AAF47164.2| 2291|Drosophila melanogaster CG11290-P...    32   0.52 

>BT001619-1|AAN71374.1|  773|Drosophila melanogaster RE35250p
           protein.
          Length = 773

 Score = 59.3 bits (137), Expect = 3e-09
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = +3

Query: 123 QDGGAPVLTDDVSLQVFMEHLKKLAVSST 209
           QDGGAPVLTDDVSLQ+FMEHLKKLAVS+T
Sbjct: 744 QDGGAPVLTDDVSLQLFMEHLKKLAVSTT 772


>AJ276482-1|CAB81549.1|  769|Drosophila melanogaster putative Sec23
           protein protein.
          Length = 769

 Score = 59.3 bits (137), Expect = 3e-09
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = +3

Query: 123 QDGGAPVLTDDVSLQVFMEHLKKLAVSST 209
           QDGGAPVLTDDVSLQ+FMEHLKKLAVS+T
Sbjct: 740 QDGGAPVLTDDVSLQLFMEHLKKLAVSTT 768


>AE014297-319|AAF51979.2|  773|Drosophila melanogaster CG1250-PB,
           isoform B protein.
          Length = 773

 Score = 59.3 bits (137), Expect = 3e-09
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = +3

Query: 123 QDGGAPVLTDDVSLQVFMEHLKKLAVSST 209
           QDGGAPVLTDDVSLQ+FMEHLKKLAVS+T
Sbjct: 744 QDGGAPVLTDDVSLQLFMEHLKKLAVSTT 772


>AE014297-318|AAF51978.2|  773|Drosophila melanogaster CG1250-PA,
           isoform A protein.
          Length = 773

 Score = 59.3 bits (137), Expect = 3e-09
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = +3

Query: 123 QDGGAPVLTDDVSLQVFMEHLKKLAVSST 209
           QDGGAPVLTDDVSLQ+FMEHLKKLAVS+T
Sbjct: 744 QDGGAPVLTDDVSLQLFMEHLKKLAVSTT 772


>AE013599-3815|AAF47164.2| 2291|Drosophila melanogaster CG11290-PA
            protein.
          Length = 2291

 Score = 31.9 bits (69), Expect = 0.52
 Identities = 16/53 (30%), Positives = 30/53 (56%)
 Frame = -3

Query: 506  KVENGTSIQIPVTSE*KLNIVGISSLNSSTNHKNDTKVFARRRPIRPKSAYST 348
            KVE+G +    ++ E KLN +G S+++++  H N  +V   +  + P   Y+T
Sbjct: 1734 KVEHGVNSTSVISREGKLNKIGHSNIHATAQHAN-LQVGGGQSDVNPNMVYNT 1785


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,512,715
Number of Sequences: 53049
Number of extensions: 446440
Number of successful extensions: 944
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1846255872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)