Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_P04
         (490 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...    25   1.1  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   4.2  
DQ974165-1|ABJ52805.1|  482|Anopheles gambiae serpin 5 protein.        23   5.6  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    22   9.8  
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    22   9.8  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -3

Query: 212 VKTTEGNAFLLFCHIL*VTDSTAKRQFSYSHGSFI 108
           VKTT+G    +FC    + DS ++R+  Y+  S I
Sbjct: 130 VKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQI 164


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 231 HNGQLHR*NDGRECIPSFLSHSLGNG 154
           H G L+     +   P FL H+ GNG
Sbjct: 821 HKGNLNDTEVQKSLPPKFLIHTFGNG 846


>DQ974165-1|ABJ52805.1|  482|Anopheles gambiae serpin 5 protein.
          Length = 482

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +3

Query: 87  RVHFKNTYETAMAIRKLPLRR 149
           R+H  NTY+   A+++L +R+
Sbjct: 368 RMHASNTYDLKAALQQLGVRK 388


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 129 RKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGR 227
           R+L    ++R +KN + K   IP    NG  G+
Sbjct: 177 RRLSSFTSIRSVKNDSRKPRIIPVVEINGHGGQ 209


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 51  GYPAPESNDPFFISP 7
           G P P SN+P+ + P
Sbjct: 229 GPPPPTSNEPYLVVP 243


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,398
Number of Sequences: 2352
Number of extensions: 11818
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)