Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_P04
         (490 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060845-1|AAL28393.1|  186|Drosophila melanogaster GM02242p pro...   283   9e-77
AE014298-945|AAN09183.1|  186|Drosophila melanogaster CG3203-PD,...   283   9e-77
AE014298-944|AAF46194.1|  186|Drosophila melanogaster CG3203-PC,...   283   9e-77
AE014298-943|AAN09182.1|  186|Drosophila melanogaster CG3203-PB,...   283   9e-77
AE014298-942|AAF46195.1|  186|Drosophila melanogaster CG3203-PA,...   283   9e-77
AF521598-1|AAN62854.1|  400|Drosophila melanogaster MSP-300/nesp...    28   6.0  
AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P...    28   6.0  

>AY060845-1|AAL28393.1|  186|Drosophila melanogaster GM02242p
           protein.
          Length = 186

 Score =  283 bits (694), Expect = 9e-77
 Identities = 128/155 (82%), Positives = 142/155 (91%)
 Frame = +3

Query: 21  MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPF 200
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI+++PLRRA RYLK V ++KEC+PF
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60

Query: 201 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADYKGLDVDRLVIDHIQVN 380
           RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD KGLD DRLV+ HIQVN
Sbjct: 61  RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120

Query: 381 RAPCLRRRTYRAHGRINPYMSSPCHIEVCLSERED 485
           RA CLRRRTYRAHGRINPYMSSPCH+EV L+E+E+
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEE 155


>AE014298-945|AAN09183.1|  186|Drosophila melanogaster CG3203-PD,
           isoform D protein.
          Length = 186

 Score =  283 bits (694), Expect = 9e-77
 Identities = 128/155 (82%), Positives = 142/155 (91%)
 Frame = +3

Query: 21  MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPF 200
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI+++PLRRA RYLK V ++KEC+PF
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60

Query: 201 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADYKGLDVDRLVIDHIQVN 380
           RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD KGLD DRLV+ HIQVN
Sbjct: 61  RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120

Query: 381 RAPCLRRRTYRAHGRINPYMSSPCHIEVCLSERED 485
           RA CLRRRTYRAHGRINPYMSSPCH+EV L+E+E+
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEE 155


>AE014298-944|AAF46194.1|  186|Drosophila melanogaster CG3203-PC,
           isoform C protein.
          Length = 186

 Score =  283 bits (694), Expect = 9e-77
 Identities = 128/155 (82%), Positives = 142/155 (91%)
 Frame = +3

Query: 21  MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPF 200
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI+++PLRRA RYLK V ++KEC+PF
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60

Query: 201 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADYKGLDVDRLVIDHIQVN 380
           RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD KGLD DRLV+ HIQVN
Sbjct: 61  RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120

Query: 381 RAPCLRRRTYRAHGRINPYMSSPCHIEVCLSERED 485
           RA CLRRRTYRAHGRINPYMSSPCH+EV L+E+E+
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEE 155


>AE014298-943|AAN09182.1|  186|Drosophila melanogaster CG3203-PB,
           isoform B protein.
          Length = 186

 Score =  283 bits (694), Expect = 9e-77
 Identities = 128/155 (82%), Positives = 142/155 (91%)
 Frame = +3

Query: 21  MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPF 200
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI+++PLRRA RYLK V ++KEC+PF
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60

Query: 201 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADYKGLDVDRLVIDHIQVN 380
           RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD KGLD DRLV+ HIQVN
Sbjct: 61  RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120

Query: 381 RAPCLRRRTYRAHGRINPYMSSPCHIEVCLSERED 485
           RA CLRRRTYRAHGRINPYMSSPCH+EV L+E+E+
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEE 155


>AE014298-942|AAF46195.1|  186|Drosophila melanogaster CG3203-PA,
           isoform A protein.
          Length = 186

 Score =  283 bits (694), Expect = 9e-77
 Identities = 128/155 (82%), Positives = 142/155 (91%)
 Frame = +3

Query: 21  MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPF 200
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI+++PLRRA RYLK V ++KEC+PF
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60

Query: 201 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADYKGLDVDRLVIDHIQVN 380
           RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD KGLD DRLV+ HIQVN
Sbjct: 61  RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120

Query: 381 RAPCLRRRTYRAHGRINPYMSSPCHIEVCLSERED 485
           RA CLRRRTYRAHGRINPYMSSPCH+EV L+E+E+
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEE 155


>AF521598-1|AAN62854.1|  400|Drosophila melanogaster MSP-300/nesprin
           splice variant protein.
          Length = 400

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = +3

Query: 78  SNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQA 239
           SNL VH ++  E     +KLP   A   L N T  +  +  RR   G+   A A
Sbjct: 288 SNLEVHERDAIELKNQAKKLPTDPATERLLNDTVDRIDLLLRRTQQGITMIANA 341


>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
            isoform D protein.
          Length = 11707

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = +3

Query: 78   SNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQA 239
            SNL VH ++  E     +KLP   A   L N T  +  +  RR   G+   A A
Sbjct: 7749 SNLEVHERDAIELKNQAKKLPTDPATERLLNDTVDRIDLLLRRTQQGITMIANA 7802


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,982,413
Number of Sequences: 53049
Number of extensions: 496080
Number of successful extensions: 1350
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1350
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1726192251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)