BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_P03
(585 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY187042-1|AAO39756.1| 248|Anopheles gambiae putative antennal ... 27 0.45
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 24 4.2
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 23 5.5
AY735443-1|AAU08018.1| 163|Anopheles gambiae bursicon protein. 23 7.3
AY735442-1|AAU08017.1| 163|Anopheles gambiae bursicon protein. 23 7.3
AY341149-1|AAR13713.1| 164|Anopheles gambiae aminopeptidase N p... 23 9.6
AY341147-1|AAR13711.1| 164|Anopheles gambiae aminopeptidase N p... 23 9.6
AY341146-1|AAR13710.1| 164|Anopheles gambiae aminopeptidase N p... 23 9.6
>AY187042-1|AAO39756.1| 248|Anopheles gambiae putative antennal
carrier protein TOL-2 protein.
Length = 248
Score = 27.1 bits (57), Expect = 0.45
Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 197 IDPWFISSLDVLADED-MRLLFHFNNVSVTGLKNQKIFDFRIDTKTKSVV 343
+DP I +D++ + ++ +F NV +TG K+ + + T+T +V+
Sbjct: 60 LDPLRIDEMDIVQGTGPVNIVLNFKNVDITGFKDVAVKKAKGFTETPNVM 109
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 23.8 bits (49), Expect = 4.2
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = -3
Query: 142 VDDPNNPICHVAWYHN 95
++D N P+ H +W H+
Sbjct: 103 INDRNTPVTHFSWSHD 118
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 23.4 bits (48), Expect = 5.5
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1
Query: 136 HRRRYFLRKQVKASNSIISAHRPLVHIILRRPG 234
++RRY +R ++K +I I+ RPG
Sbjct: 1814 YKRRYAMRPEIKVLANIFPVAEGYRQSIVERPG 1846
>AY735443-1|AAU08018.1| 163|Anopheles gambiae bursicon protein.
Length = 163
Score = 23.0 bits (47), Expect = 7.3
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 442 SCLCCVSSGEQ 410
SC+CC SGE+
Sbjct: 84 SCMCCQESGER 94
>AY735442-1|AAU08017.1| 163|Anopheles gambiae bursicon protein.
Length = 163
Score = 23.0 bits (47), Expect = 7.3
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 442 SCLCCVSSGEQ 410
SC+CC SGE+
Sbjct: 84 SCMCCQESGER 94
>AY341149-1|AAR13713.1| 164|Anopheles gambiae aminopeptidase N
protein.
Length = 164
Score = 22.6 bits (46), Expect = 9.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 74 EHFL*RVIVVPCDMTDWI 127
EHFL R VV D T WI
Sbjct: 60 EHFLYRGSVVTSDRTWWI 77
>AY341147-1|AAR13711.1| 164|Anopheles gambiae aminopeptidase N
protein.
Length = 164
Score = 22.6 bits (46), Expect = 9.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 74 EHFL*RVIVVPCDMTDWI 127
EHFL R VV D T WI
Sbjct: 60 EHFLYRGSVVTSDRTWWI 77
>AY341146-1|AAR13710.1| 164|Anopheles gambiae aminopeptidase N
protein.
Length = 164
Score = 22.6 bits (46), Expect = 9.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 74 EHFL*RVIVVPCDMTDWI 127
EHFL R VV D T WI
Sbjct: 60 EHFLYRGSVVTSDRTWWI 77
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,200
Number of Sequences: 2352
Number of extensions: 14200
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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