Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_P01
         (639 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    25   0.62 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    25   0.62 
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   5.8  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 3   TRPAPDVVPDERSDVTHPTNMELVTDIDI 89
           T P  D+   +  D+T+PT +E+  ++ I
Sbjct: 95  TLPIEDLTKSDNEDITYPTVLEVQLNLPI 123


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 3   TRPAPDVVPDERSDVTHPTNMELVTDIDI 89
           T P  D+   +  D+T+PT +E+  ++ I
Sbjct: 133 TLPIEDLTKSDNEDITYPTVLEVQLNLPI 161


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 174 RQVAAPHHREGFHSSQAHKSL 112
           R +   + R+G ++SQAHK L
Sbjct: 9   RHILLFYFRKGKNASQAHKKL 29


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,119
Number of Sequences: 438
Number of extensions: 1444
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)