Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_O24
(336 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0540 + 9340379-9340592,9341250-9342988 66 5e-12
03_02_0546 - 9381989-9383733,9385838-9386054 65 2e-11
03_06_0484 + 34233042-34233258,34235317-34237049 64 3e-11
05_05_0109 - 22454539-22456268,22457069-22457279 64 4e-11
11_08_0075 + 28173220-28173433,28175348-28177083 63 6e-11
01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229 62 8e-11
02_01_0112 - 839048-839552,839638-839720,839828-839982,840078-84... 59 1e-09
05_04_0052 - 17515344-17517353 51 2e-07
08_01_0654 - 5639419-5641449 51 3e-07
05_04_0392 - 20889699-20891726 50 5e-07
01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165 43 5e-05
03_05_0877 + 28443481-28443538,28443641-28443911,28444028-284442... 42 9e-05
02_05_0655 + 30668706-30668849,30669043-30669471 29 0.93
07_03_0546 - 19325526-19326054,19327109-19327631,19327898-193281... 27 3.8
06_03_0813 - 24853119-24854480,24854711-24855442,24855556-248559... 27 3.8
12_02_1202 - 26957254-26957778 27 5.0
01_01_0245 + 2013821-2014171,2014278-2014671,2015158-2015289,201... 27 5.0
11_04_0037 - 12642141-12642239,12643352-12643618,12643682-126437... 26 6.6
11_01_0651 - 5272442-5272718,5274026-5274081 26 6.6
05_04_0308 - 20081366-20082404,20082702-20083078,20084293-200846... 26 6.6
04_03_0398 - 15393102-15393378,15394685-15394740 26 6.6
07_03_0060 + 12927697-12927830,12928042-12928315 26 8.7
04_01_0477 - 6221990-6223224,6227722-6228817 26 8.7
03_05_0584 - 25839566-25840255 26 8.7
02_04_0617 - 24422922-24422927,24423063-24423134,24423223-244233... 26 8.7
02_02_0202 - 7742137-7744636,7744760-7744973,7745755-7745797 26 8.7
01_01_1166 + 9287840-9288040,9289752-9289799,9292166-9292282,929... 26 8.7
>03_02_0540 + 9340379-9340592,9341250-9342988
Length = 650
Score = 66.5 bits (155), Expect = 5e-12
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = -1
Query: 333 IMDKCNDTIKWLDSNQLADKEEYEHKQKELEGVCNPIITKLYQ 205
I D + I WLDSNQLA+ EE+E K KELEGVCNPII K+YQ
Sbjct: 576 IEDAIDGAISWLDSNQLAEAEEFEDKMKELEGVCNPIIAKMYQ 618
>03_02_0546 - 9381989-9383733,9385838-9386054
Length = 653
Score = 64.9 bits (151), Expect = 2e-11
Identities = 27/43 (62%), Positives = 33/43 (76%)
Frame = -1
Query: 333 IMDKCNDTIKWLDSNQLADKEEYEHKQKELEGVCNPIITKLYQ 205
I D D IKWLD NQLA+ +E+E K KELE +CNPII+K+YQ
Sbjct: 577 IEDAIEDAIKWLDGNQLAEADEFEDKMKELESLCNPIISKMYQ 619
>03_06_0484 + 34233042-34233258,34235317-34237049
Length = 649
Score = 64.1 bits (149), Expect = 3e-11
Identities = 27/43 (62%), Positives = 33/43 (76%)
Frame = -1
Query: 333 IMDKCNDTIKWLDSNQLADKEEYEHKQKELEGVCNPIITKLYQ 205
I D I+WLD+NQLA+ EE+E K KELEG+CNPII K+YQ
Sbjct: 577 IEDAVEQAIQWLDNNQLAEVEEFEDKMKELEGLCNPIIAKMYQ 619
>05_05_0109 - 22454539-22456268,22457069-22457279
Length = 646
Score = 63.7 bits (148), Expect = 4e-11
Identities = 26/43 (60%), Positives = 33/43 (76%)
Frame = -1
Query: 333 IMDKCNDTIKWLDSNQLADKEEYEHKQKELEGVCNPIITKLYQ 205
I D + I WLD+NQLA+ +E+E K KELEG+CNPII K+YQ
Sbjct: 575 IEDAIDGAISWLDTNQLAEADEFEDKMKELEGICNPIIAKMYQ 617
>11_08_0075 + 28173220-28173433,28175348-28177083
Length = 649
Score = 62.9 bits (146), Expect = 6e-11
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = -1
Query: 333 IMDKCNDTIKWLDSNQLADKEEYEHKQKELEGVCNPIITKLYQ 205
I D + I+WLD NQLA+ +E++ K KELEG+CNPII K+YQ
Sbjct: 576 IEDAIDQAIQWLDGNQLAEADEFDDKMKELEGICNPIIAKMYQ 618
>01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229
Length = 841
Score = 62.5 bits (145), Expect = 8e-11
Identities = 26/43 (60%), Positives = 32/43 (74%)
Frame = -1
Query: 333 IMDKCNDTIKWLDSNQLADKEEYEHKQKELEGVCNPIITKLYQ 205
I D + I WLDSNQLA+ +E+E K KELE +CNPII K+YQ
Sbjct: 768 IEDAIDGAINWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 810
>02_01_0112 -
839048-839552,839638-839720,839828-839982,840078-840557,
840855-841097,841189-841403,841489-841756,842477-842525
Length = 665
Score = 58.8 bits (136), Expect = 1e-09
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = -1
Query: 333 IMDKCNDTIKWLDSNQLADKEEYEHKQKELEGVCNPIITKLYQ 205
+ + + ++WLD NQ A+KEEYE K KE+E VCNPII+ +YQ
Sbjct: 600 VEEALKEALEWLDENQTAEKEEYEEKLKEVEAVCNPIISAVYQ 642
>05_04_0052 - 17515344-17517353
Length = 669
Score = 51.2 bits (117), Expect = 2e-07
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = -1
Query: 315 DTIKWLDSNQLADKEEYEHKQKELEGVCNPIITKLYQ 205
+ +WLD NQ KEEYE K +ELE VCNP+++ +YQ
Sbjct: 613 EAYEWLDGNQDVGKEEYEEKLRELEDVCNPVMSAVYQ 649
>08_01_0654 - 5639419-5641449
Length = 676
Score = 50.8 bits (116), Expect = 3e-07
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = -1
Query: 333 IMDKCNDTIKWLDSNQLADKEEYEHKQKELEGVCNPIITKLYQ 205
+ + + +WLD N A KEEYE K +ELE VCNP+++ +YQ
Sbjct: 610 VEEAVREAYEWLDGNPDAGKEEYEEKLRELEDVCNPVMSAVYQ 652
>05_04_0392 - 20889699-20891726
Length = 675
Score = 50.0 bits (114), Expect = 5e-07
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = -1
Query: 306 KWLDSNQLADKEEYEHKQKELEGVCNPIITKLYQ 205
+WLD N A KEEYE K +ELE VCNP+++ +YQ
Sbjct: 619 EWLDGNPDAGKEEYEEKLRELEDVCNPVMSAVYQ 652
>01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165
Length = 648
Score = 43.2 bits (97), Expect = 5e-05
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = -1
Query: 324 KCNDTIKWLDSNQLADKEEYEHKQKELEGVCNPI 223
K +WLD N A+KE+YE K KELE C P+
Sbjct: 602 KARAASEWLDGNPAAEKEDYEEKLKELEDACGPV 635
>03_05_0877 +
28443481-28443538,28443641-28443911,28444028-28444242,
28444329-28445057,28445143-28445297,28445384-28445965
Length = 669
Score = 42.3 bits (95), Expect = 9e-05
Identities = 18/41 (43%), Positives = 29/41 (70%), Gaps = 4/41 (9%)
Frame = -1
Query: 315 DTIKWLDSN----QLADKEEYEHKQKELEGVCNPIITKLYQ 205
+ ++WL+ N + A+KE+YE K KE+E VC PII ++Y+
Sbjct: 611 EALEWLEDNDGGARTAEKEDYEEKLKEVEQVCGPIIKQVYK 651
>02_05_0655 + 30668706-30668849,30669043-30669471
Length = 190
Score = 29.1 bits (62), Expect = 0.93
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 225 SGCKHPPVPSACAHTLPYQPADSSR 299
S C PP+P+A A+T P+ SSR
Sbjct: 65 SPCSAPPLPTAAAYTPPHTNTPSSR 89
>07_03_0546 -
19325526-19326054,19327109-19327631,19327898-19328152,
19328283-19328472,19328473-19328525,19329295-19329555,
19329670-19329720,19329873-19330121,19330225-19330453,
19332245-19332559
Length = 884
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 85 VDLLDGGSGTSAGRCASRTGCS 150
++ DGG GT A SR GCS
Sbjct: 44 IESSDGGGGTPAAASGSRGGCS 65
>06_03_0813 -
24853119-24854480,24854711-24855442,24855556-24855962,
24856091-24856359,24856681-24856733,24857019-24857078,
24857309-24857363,24858080-24858155,24858225-24858801
Length = 1196
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 100 GGSGTSAGRCASRTGCSARE 159
GGSG+ +GR +SR G ARE
Sbjct: 625 GGSGSGSGRGSSRGGGGARE 644
>12_02_1202 - 26957254-26957778
Length = 174
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 94 LDGGSGTSAGRCASRTGCS 150
+D +GTS+GR RTGCS
Sbjct: 58 IDVPAGTSSGRVWGRTGCS 76
>01_01_0245 +
2013821-2014171,2014278-2014671,2015158-2015289,
2015747-2015788,2016096-2017057
Length = 626
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 231 CKHPPVPSACAHTLPYQPADSSR 299
C HPPV C L +QP S+
Sbjct: 269 CIHPPVDEGCLRKLAWQPMTLSQ 291
>11_04_0037 -
12642141-12642239,12643352-12643618,12643682-12643750,
12643919-12644116,12644262-12644267
Length = 212
Score = 26.2 bits (55), Expect = 6.6
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -1
Query: 309 IKWLDSNQLADKEEYEHKQKE 247
+KW+DS L ++E + KQ++
Sbjct: 93 VKWIDSGALGEEEVVDEKQRQ 113
>11_01_0651 - 5272442-5272718,5274026-5274081
Length = 110
Score = 26.2 bits (55), Expect = 6.6
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 5/88 (5%)
Frame = -2
Query: 326 TSATTPSNGSTRISWL-IRKSMSTSRRNWRVFATRSSRSCTRXXXXXXXXXXXXXPGSL- 153
TS + S+G + WL + +++ S+ W TR SR+C R L
Sbjct: 5 TSPSRDSSGLADVYWLNMSSTLTASQSAW----TRGSRNCHRPLVTGTARPLHGARSPLR 60
Query: 152 AEHPVREAQRP---AEVPDPPSRRSTKH 78
P +A RP + DP +KH
Sbjct: 61 RSKPAVQAGRPRRRRRLDDPADDGQSKH 88
>05_04_0308 -
20081366-20082404,20082702-20083078,20084293-20084679,
20085038-20086000
Length = 921
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -1
Query: 303 WLDSNQLADKEEYEHKQKELEGVCN 229
W +++Q+ EE+ QK+ +GVCN
Sbjct: 195 WYENSQIIYFEEFFKTQKKGKGVCN 219
>04_03_0398 - 15393102-15393378,15394685-15394740
Length = 110
Score = 26.2 bits (55), Expect = 6.6
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 5/88 (5%)
Frame = -2
Query: 326 TSATTPSNGSTRISWL-IRKSMSTSRRNWRVFATRSSRSCTRXXXXXXXXXXXXXPGSL- 153
TS + S+G + WL + +++ S+ W TR SR+C R L
Sbjct: 5 TSPSRDSSGLADVYWLNMSSTLTASQSAW----TRGSRNCHRPLVTGTARPLHGARSPLR 60
Query: 152 AEHPVREAQRP---AEVPDPPSRRSTKH 78
P +A RP + DP +KH
Sbjct: 61 RSKPAVQAGRPRRRRRLDDPADDGQSKH 88
>07_03_0060 + 12927697-12927830,12928042-12928315
Length = 135
Score = 25.8 bits (54), Expect = 8.7
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -2
Query: 335 SSWTSATTPSNGST----RISWLIRKSMSTSRRNWRVFATRSSRS 213
S+W +T +GS R SW+I S +TS R + SRS
Sbjct: 45 SNWNEDSTVESGSDSTCRRSSWVISTSRTTSLRQKESLSKMRSRS 89
>04_01_0477 - 6221990-6223224,6227722-6228817
Length = 776
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 149 EHPVREAQRPAEVPDPPSRRSTKHST 72
EH R++QRP V P +R +H T
Sbjct: 363 EHDERKSQRPKRVSPPSARLWPRHFT 388
>03_05_0584 - 25839566-25840255
Length = 229
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 91 LLDGGSGTSAGRCASRTGCS 150
++D +GT+ GR +RTGCS
Sbjct: 54 VIDVPAGTTGGRVWARTGCS 73
>02_04_0617 -
24422922-24422927,24423063-24423134,24423223-24423324,
24423443-24423559,24423626-24423764,24423857-24423963,
24424052-24424161,24425749-24425882,24426005-24426145,
24426241-24426440,24426781-24426941,24427753-24427897
Length = 477
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 297 DSNQLADKEEYEHKQKELEGV 235
D NQL EEY+ +K L+GV
Sbjct: 285 DVNQLFSTEEYDKVEKALQGV 305
>02_02_0202 - 7742137-7744636,7744760-7744973,7745755-7745797
Length = 918
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -2
Query: 152 AEHPVREAQRPAEV-PDPPSRRSTKHSTINNY 60
A P + PA+V P P RRS +HS ++++
Sbjct: 17 ANPPPAPSTAPAQVRPTPSRRRSLQHSALHSF 48
>01_01_1166 + 9287840-9288040,9289752-9289799,9292166-9292282,
9293018-9293700,9295214-9297190,9298330-9298441,
9299848-9299904
Length = 1064
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 97 DGGSGTSAGRCASRTGCSARE 159
DG S AGR A TGC+ RE
Sbjct: 1042 DGRSLAKAGRKAGVTGCTGRE 1062
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,141,289
Number of Sequences: 37544
Number of extensions: 97356
Number of successful extensions: 507
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 507
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 471517020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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