Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_O21
(188 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z11692-1|CAA77750.1| 858|Homo sapiens human elongation factor ... 90 1e-18
X51466-1|CAA35829.1| 858|Homo sapiens elongation factor 2 protein. 90 1e-18
BC126259-1|AAI26260.1| 858|Homo sapiens EEF2 protein protein. 90 1e-18
BC024689-1|AAH24689.1| 517|Homo sapiens Similar to Elongation f... 90 1e-18
BC006547-1|AAH06547.1| 583|Homo sapiens EEF2 protein protein. 90 1e-18
AY942181-1|AAX34409.1| 858|Homo sapiens elongation factor 2 pro... 90 1e-18
AK023181-1|BAB14450.1| 857|Homo sapiens protein ( Homo sapiens ... 40 0.001
D21163-1|BAA04699.2| 977|Homo sapiens KIAA0031 protein. 33 0.16
CR456774-1|CAG33055.1| 972|Homo sapiens U5-116KD protein. 33 0.16
BC002360-1|AAH02360.1| 972|Homo sapiens elongation factor Tu GT... 33 0.16
AJ505017-1|CAD43720.1| 850|Homo sapiens small nuclear ribonucle... 33 0.16
BC049210-1|AAH49210.1| 751|Homo sapiens G elongation factor, mi... 29 2.6
AF367998-1|AAK53402.1| 751|Homo sapiens elongation factor G1 pr... 29 2.6
AF309777-1|AAK58877.1| 751|Homo sapiens elongation factor G pro... 29 2.6
BC045634-1|AAH45634.2| 351|Homo sapiens PCYT1B protein protein. 27 8.1
AF148464-1|AAD35088.1| 369|Homo sapiens CTP:phosphocholine cyti... 27 8.1
>Z11692-1|CAA77750.1| 858|Homo sapiens human elongation factor 2
protein.
Length = 858
Score = 89.8 bits (213), Expect = 1e-18
Identities = 43/53 (81%), Positives = 45/53 (84%)
Frame = +1
Query: 13 PISSPARKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGT 171
P +P +KEDLY K IQRTILMMGRYVE IEDVP GNI GLVGVDQFLVKTGT
Sbjct: 432 PNYTPGKKEDLYLKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGT 484
>X51466-1|CAA35829.1| 858|Homo sapiens elongation factor 2 protein.
Length = 858
Score = 89.8 bits (213), Expect = 1e-18
Identities = 43/53 (81%), Positives = 45/53 (84%)
Frame = +1
Query: 13 PISSPARKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGT 171
P +P +KEDLY K IQRTILMMGRYVE IEDVP GNI GLVGVDQFLVKTGT
Sbjct: 432 PNYTPGKKEDLYLKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGT 484
>BC126259-1|AAI26260.1| 858|Homo sapiens EEF2 protein protein.
Length = 858
Score = 89.8 bits (213), Expect = 1e-18
Identities = 43/53 (81%), Positives = 45/53 (84%)
Frame = +1
Query: 13 PISSPARKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGT 171
P +P +KEDLY K IQRTILMMGRYVE IEDVP GNI GLVGVDQFLVKTGT
Sbjct: 432 PNYTPGKKEDLYLKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGT 484
>BC024689-1|AAH24689.1| 517|Homo sapiens Similar to Elongation
factor 2b protein.
Length = 517
Score = 89.8 bits (213), Expect = 1e-18
Identities = 43/53 (81%), Positives = 45/53 (84%)
Frame = +1
Query: 13 PISSPARKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGT 171
P +P +KEDLY K IQRTILMMGRYVE IEDVP GNI GLVGVDQFLVKTGT
Sbjct: 91 PNYTPGKKEDLYLKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGT 143
>BC006547-1|AAH06547.1| 583|Homo sapiens EEF2 protein protein.
Length = 583
Score = 89.8 bits (213), Expect = 1e-18
Identities = 43/53 (81%), Positives = 45/53 (84%)
Frame = +1
Query: 13 PISSPARKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGT 171
P +P +KEDLY K IQRTILMMGRYVE IEDVP GNI GLVGVDQFLVKTGT
Sbjct: 432 PNYTPGKKEDLYLKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGT 484
>AY942181-1|AAX34409.1| 858|Homo sapiens elongation factor 2
protein.
Length = 858
Score = 89.8 bits (213), Expect = 1e-18
Identities = 43/53 (81%), Positives = 45/53 (84%)
Frame = +1
Query: 13 PISSPARKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGT 171
P +P +KEDLY K IQRTILMMGRYVE IEDVP GNI GLVGVDQFLVKTGT
Sbjct: 432 PNYTPGKKEDLYLKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGT 484
>AK023181-1|BAB14450.1| 857|Homo sapiens protein ( Homo sapiens
cDNA FLJ13119 fis, clone NT2RP3002671, weakly similar to
ELONGATION FACTOR 2. ).
Length = 857
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = +1
Query: 58 IQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGT 171
++ L+MGR +E +E+VP GN+ G+ G+ F++K+ T
Sbjct: 297 LENLYLLMGRELEYLEEVPPGNVLGIGGLQDFVLKSAT 334
>D21163-1|BAA04699.2| 977|Homo sapiens KIAA0031 protein.
Length = 977
Score = 33.1 bits (72), Expect = 0.16
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +1
Query: 34 KEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGT 171
+ED T+ R + + RY + VP+GN + GVDQ +VKT T
Sbjct: 524 EEDSQICTVGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIVKTAT 569
>CR456774-1|CAG33055.1| 972|Homo sapiens U5-116KD protein.
Length = 972
Score = 33.1 bits (72), Expect = 0.16
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +1
Query: 34 KEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGT 171
+ED T+ R + + RY + VP+GN + GVDQ +VKT T
Sbjct: 519 EEDSQICTVGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIVKTAT 564
>BC002360-1|AAH02360.1| 972|Homo sapiens elongation factor Tu GTP
binding domain containing 2 protein.
Length = 972
Score = 33.1 bits (72), Expect = 0.16
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +1
Query: 34 KEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGT 171
+ED T+ R + + RY + VP+GN + GVDQ +VKT T
Sbjct: 519 EEDSQICTVGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIVKTAT 564
>AJ505017-1|CAD43720.1| 850|Homo sapiens small nuclear
ribonucleoprotein component protein.
Length = 850
Score = 33.1 bits (72), Expect = 0.16
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +1
Query: 34 KEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGT 171
+ED T+ R + + RY + VP+GN + GVDQ +VKT T
Sbjct: 397 EEDSQICTVGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIVKTAT 442
>BC049210-1|AAH49210.1| 751|Homo sapiens G elongation factor,
mitochondrial 1 protein.
Length = 751
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 58 IQRTILMMGRYVEAIEDVPSGNICGLVGVD 147
+QR M +E +E+V +G+IC L G+D
Sbjct: 395 LQRLARMHADMMEDVEEVYAGDICALFGID 424
>AF367998-1|AAK53402.1| 751|Homo sapiens elongation factor G1
protein.
Length = 751
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 58 IQRTILMMGRYVEAIEDVPSGNICGLVGVD 147
+QR M +E +E+V +G+IC L G+D
Sbjct: 395 LQRLARMHADMMEDVEEVYAGDICALFGID 424
>AF309777-1|AAK58877.1| 751|Homo sapiens elongation factor G
protein.
Length = 751
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 58 IQRTILMMGRYVEAIEDVPSGNICGLVGVD 147
+QR M +E +E+V +G+IC L G+D
Sbjct: 395 LQRLARMHADMMEDVEEVYAGDICALFGID 424
>BC045634-1|AAH45634.2| 351|Homo sapiens PCYT1B protein protein.
Length = 351
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +2
Query: 50 RRPSSVPSS*WAVTWRPLRMCPPVTFAVWSASISS 154
R PS PS +W PL+ PP + SASISS
Sbjct: 310 RSPSRSPSP--TFSWLPLKTSPPSSPKAASASISS 342
>AF148464-1|AAD35088.1| 369|Homo sapiens CTP:phosphocholine
cytidylyltransferase CCTB2 isoform protein.
Length = 369
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +2
Query: 50 RRPSSVPSS*WAVTWRPLRMCPPVTFAVWSASISS 154
R PS PS +W PL+ PP + SASISS
Sbjct: 328 RSPSRSPSP--TFSWLPLKTSPPSSPKAASASISS 360
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,137,125
Number of Sequences: 237096
Number of extensions: 620262
Number of successful extensions: 4960
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4960
length of database: 76,859,062
effective HSP length: 42
effective length of database: 66,901,030
effective search space used: 1338020600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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