Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_O21
         (188 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    23   0.33 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   0.77 
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               20   3.1  
AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synth...    20   3.1  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    19   4.1  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        19   4.1  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        19   4.1  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        19   4.1  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                19   4.1  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    19   5.4  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    19   5.4  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    19   5.4  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    19   5.4  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    19   5.4  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    19   5.4  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    19   5.4  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    19   7.2  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    18   9.5  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    18   9.5  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              18   9.5  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    18   9.5  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    18   9.5  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    18   9.5  
AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength rhodo...    18   9.5  

>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 23.0 bits (47), Expect = 0.33
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 52  SHTNLLFLPGWKLGPMI 2
           +H N+ +LPG KL P I
Sbjct: 58  THENVKYLPGHKLPPNI 74


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 0.77
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 140 ASISSSLRLVPITT 181
           A I+ SLRL+P TT
Sbjct: 383 ACITESLRLIPTTT 396


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +1

Query: 1   VSWAPISSPARKEDLYEK 54
           +SW P+  P +   L+E+
Sbjct: 431 ISWNPLMQPKQPIKLFEQ 448


>AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP
          synthase 16 kDa proteolipidsubunit protein.
          Length = 156

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +3

Query: 51 EDHPAYHPHDG 83
          EDHP Y P  G
Sbjct: 4  EDHPIYAPFFG 14


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 120 TGGHILNGLHVTAHH 76
           T GH  + +H T HH
Sbjct: 418 TMGHGHSHIHATPHH 432


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 67  YAGWSSHTNLLF 32
           +  WS+  NLLF
Sbjct: 671 FGSWSNRPNLLF 682


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 67  YAGWSSHTNLLF 32
           +  WS+  NLLF
Sbjct: 671 FGSWSNRPNLLF 682


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 67  YAGWSSHTNLLF 32
           +  WS+  NLLF
Sbjct: 671 FGSWSNRPNLLF 682


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = +3

Query: 60  PAYHPH 77
           P+YHPH
Sbjct: 314 PSYHPH 319


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 2/15 (13%)
 Frame = -2

Query: 40  LLFLPG--WKLGPMI 2
           LL L G  W+LGPM+
Sbjct: 96  LLQLTGGTWELGPML 110


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 119 VTFAVWSASISSSL 160
           VTF VW  ++++ L
Sbjct: 903 VTFPVWQVTLNARL 916


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 54  LLIQIFFSCRAGNW 13
           LL  +FF C A +W
Sbjct: 455 LLFLMFFECIAISW 468


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 54  LLIQIFFSCRAGNW 13
           LL  +FF C A +W
Sbjct: 508 LLFLMFFECIAISW 521


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 9   GPNFQPGKKRRFV*EDHPAYHPHDGPLRGGH 101
           GP+  P  + +   + H   HPH  P +G H
Sbjct: 157 GPDSPPLVESQMHHQMH-TQHPHMQPQQGQH 186


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +1

Query: 1   VSWAPISSPARKEDLYEKTIQRTILMMGRYVEAIEDVPSGNI 126
           V+ AP   P    DL  +   R +   G     I+DV  GN+
Sbjct: 23  VNAAPDWVPPEVFDLVAEDKARCMSEHGTTQAQIDDVDKGNL 64


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +1

Query: 1   VSWAPISSPARKEDLYEKTIQRTILMMGRYVEAIEDVPSGNI 126
           V+ AP   P    DL  +   R +   G     I+DV  GN+
Sbjct: 23  VNAAPDWVPPEVFDLVAEDKARCMSEHGTTQAQIDDVDKGNL 64


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -3

Query: 177 VIGTSLNEELIDADQTANVTGG 112
           ++G  L ++    DQ AN+  G
Sbjct: 252 IVGKYLQQQAGQQDQQANIGRG 273


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 5/9 (55%), Positives = 5/9 (55%)
 Frame = -2

Query: 82  PS*GWYAGW 56
           P   WY GW
Sbjct: 206 PKTPWYKGW 214


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -2

Query: 37  LFLPGWKLGPM 5
           LF  GW + PM
Sbjct: 177 LFSLGWTIAPM 187


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 8/32 (25%), Positives = 14/32 (43%)
 Frame = +1

Query: 34  KEDLYEKTIQRTILMMGRYVEAIEDVPSGNIC 129
           +E   E+T +     + R V   +D+   N C
Sbjct: 81  EEKFRERTTKLDSEQVNRLVNNCKDITESNSC 112


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = +3

Query: 18  FQPGKKRRFV*EDHPAYHPHDGPLRGG 98
           + P  +  FV  D     P   P+RGG
Sbjct: 358 YSPSVQHEFVTFDLDEPLPPPPPIRGG 384


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -3

Query: 102 NGLHVTAHH 76
           NGLH T  H
Sbjct: 406 NGLHTTTAH 414


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -3

Query: 117 GGHILNGLHVTAHHEDGT 64
           GG +   L    H +DGT
Sbjct: 450 GGELWTVLRDKGHFDDGT 467


>AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength
          rhodopsin protein.
          Length = 154

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -2

Query: 37 LFLPGWKLGPM 5
          LF  GW + PM
Sbjct: 53 LFSLGWTIAPM 63


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,253
Number of Sequences: 438
Number of extensions: 1154
Number of successful extensions: 24
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 42
effective length of database: 127,947
effective search space used:  2558940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)