Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_O20
         (450 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   3.6  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    21   6.2  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    21   6.2  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -2

Query: 101 TATDNN*HLTVSHSKYYRMLILINYALRYRNPR 3
           T  DN   LT  +SK Y+M +    +  +  PR
Sbjct: 310 TQRDNPQILTYKYSKRYKMAVAFMLSHPFGTPR 342


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 426 CVYKVILLVY*LTNYIKPVYKI 361
           CV K I ++     Y++PVYK+
Sbjct: 72  CVMKRIEMLKGTELYVEPVYKM 93


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 426 CVYKVILLVY*LTNYIKPVYKI 361
           CV K I ++     Y++PVYK+
Sbjct: 72  CVMKRIEMLKGTELYVEPVYKM 93


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,673
Number of Sequences: 438
Number of extensions: 2867
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)