Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_O19
         (540 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          23   2.6  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          23   2.6  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          23   2.6  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          23   2.6  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          23   2.6  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          23   2.6  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          23   2.6  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    23   2.6  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   6.1  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   8.1  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   8.1  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   8.1  

>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +3

Query: 438 INQKEITKNIVNLTNDISQ 494
           I ++E  KNI+N TN+I++
Sbjct: 170 IFEREEIKNILNKTNEITE 188


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +3

Query: 438 INQKEITKNIVNLTNDISQ 494
           I ++E  KNI+N TN+I++
Sbjct: 170 IFEREEIKNILNKTNEITE 188


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +3

Query: 438 INQKEITKNIVNLTNDISQ 494
           I ++E  KNI+N TN+I++
Sbjct: 170 IFEREEIKNILNKTNEITE 188


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +3

Query: 438 INQKEITKNIVNLTNDISQ 494
           I ++E  KNI+N TN+I++
Sbjct: 170 IFEREEIKNILNKTNEITE 188


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +3

Query: 438 INQKEITKNIVNLTNDISQ 494
           I ++E  KNI+N TN+I++
Sbjct: 170 IFEREEIKNILNKTNEITE 188


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +3

Query: 438 INQKEITKNIVNLTNDISQ 494
           I ++E  KNI+N TN+I++
Sbjct: 170 IFEREEIKNILNKTNEITE 188


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +3

Query: 438 INQKEITKNIVNLTNDISQ 494
           I ++E  KNI+N TN+I++
Sbjct: 170 IFEREEIKNILNKTNEITE 188


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +3

Query: 438 INQKEITKNIVNLTNDISQ 494
           I ++E  KNI+N TN+I++
Sbjct: 170 IFEREEIKNILNKTNEITE 188


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +2

Query: 56  INENKIVYAKHTSLSEAKKINGLRAMFDE 142
           I EN+     +T  S    + GL  +FDE
Sbjct: 117 IVENQYAVENNTGSSLCDLVQGLERLFDE 145


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -3

Query: 226 ETDRNIWVFYQIFNRYTYRHYSNW 155
           ET +   +   + N Y Y +Y+N+
Sbjct: 74  ETSKEPKIISSLSNNYKYSNYNNY 97


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -3

Query: 226 ETDRNIWVFYQIFNRYTYRHYSNW 155
           ET +   +   + N Y Y +Y+N+
Sbjct: 74  ETSKEPKIISSLSNNYKYSNYNNY 97


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -2

Query: 80  RKQFYFH 60
           RKQFYFH
Sbjct: 186 RKQFYFH 192


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,212
Number of Sequences: 438
Number of extensions: 2679
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)