Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_O17
(570 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F12.02c |p23fy||translationally controlled tumor protein ho... 135 5e-33
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.48
SPAC607.08c |||DUF726 family protein|Schizosaccharomyces pombe|c... 29 0.63
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 28 0.84
SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity prote... 28 0.84
SPAC30D11.07 |nth1||DNA endonuclease III|Schizosaccharomyces pom... 28 0.84
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 28 1.1
SPBC1271.08c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 1.5
SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5 |Sc... 27 1.5
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 27 2.6
SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1 |S... 26 4.5
SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr 1|||M... 25 5.9
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 5.9
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 25 7.8
SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces po... 25 7.8
SPBC1718.07c |zfs1|moc4|transcription factor Zfs1 |Schizosacchar... 25 7.8
>SPAC1F12.02c |p23fy||translationally controlled tumor protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 168
Score = 135 bits (326), Expect = 5e-33
Identities = 69/150 (46%), Positives = 100/150 (66%), Gaps = 1/150 (0%)
Frame = +1
Query: 124 MIIYKDVITGDEMFSDTYKVKLIDEVIYEVTGKTV-IRTQDDIHIDGFNPSAEEADEGTD 300
M++YKDVI+GDE+ SD Y +K +D+++YE + V ++ D+ I G NPSAE+A+E +
Sbjct: 1 MLLYKDVISGDELVSDAYDLKEVDDIVYEADCQMVTVKQGGDVDI-GANPSAEDAEENAE 59
Query: 301 SNVETGVDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVDIFKTNMNKV 480
ET ++V + RL T +F DKKSY Y+K YMK + A+L+E P++V +F+ N
Sbjct: 60 EGTETVNNLVYSFRLSPT-SF-DKKSYMSYIKGYMKAIKARLQESNPERVPVFEKNAIGF 117
Query: 481 MKDILARFKDLQFFTGESMDCDGMVAMMEY 570
+K ILA FKD F+ GESMD D MV +M Y
Sbjct: 118 VKKILANFKDYDFYIGESMDPDAMVVLMNY 147
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.1 bits (62), Expect = 0.48
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = -2
Query: 362 NAYVSTSL*FRTM---STPVSTLESVPSSA---SSAEGLNPSMWISSCVLITVLPVTS*I 201
N STS+ + + STP++T S++ +S + + ISS +T PVT+
Sbjct: 531 NCTTSTSVLYTSTPVTSTPLATTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTTN 590
Query: 200 TSSINLTLYVSENISSPVITS 138
++ LY S I+SP TS
Sbjct: 591 CTTSTSVLYTSTPITSPNSTS 611
Score = 25.8 bits (54), Expect = 4.5
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = -2
Query: 323 STPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS*ITSSINLTLYVSENISSPVI 144
+TPV+ +VP ++SS + S+ V T PVTS ++ N T S +S +
Sbjct: 406 TTPVTP--TVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPYTSTPV 463
Query: 143 TS 138
TS
Sbjct: 464 TS 465
>SPAC607.08c |||DUF726 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 579
Score = 28.7 bits (61), Expect = 0.63
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +1
Query: 58 GTRGARSRSFGFIILNRLQSIKMIIYKDVITGDEMFSDTYKVKLIDEVIYEVTGKTVIR 234
G SR+ + I +L +++YK + M DT++ ++ +YE++G +R
Sbjct: 112 GNYSPYSRNLLYSIAEKLGLSSIVVYKAELITSSMLLDTFQTMESNQEMYELSGTRKMR 170
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase
Hrp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1388
Score = 28.3 bits (60), Expect = 0.84
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Frame = +1
Query: 193 DEVIYEVTGKTVIRTQDDIHIDGFNPSAEE-----ADEGTDSNVET-GVDIVLNHRLVE 351
DE+ + + +D + + F EE A E ++ +T +D+VL+HRL+E
Sbjct: 145 DEIRFSSRNSKGVNYNEDAYFESFEEEEEEEMYEYATEVSEEPEDTRAIDVVLDHRLIE 203
>SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity protein
kinase Mph1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 678
Score = 28.3 bits (60), Expect = 0.84
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +1
Query: 181 VKLIDEVIYEVTGKTVIRTQDDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYA 360
+KLID I + G D HI N A EA +++ +GV +V R + ++
Sbjct: 455 LKLIDFGIAKAIGNDTTNIHRDSHIGTINYMAPEALTDMNAHTNSGVKLVKLGRPSDVWS 514
Query: 361 FG 366
G
Sbjct: 515 LG 516
>SPAC30D11.07 |nth1||DNA endonuclease III|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 355
Score = 28.3 bits (60), Expect = 0.84
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 319 VDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVDIFKT 465
+D V ++L+E F ++K T+YLK + L K + PD V+ T
Sbjct: 89 IDEVSLNKLIEKVGFHNRK--TIYLKQMARILSEKFQGDIPDTVEDLMT 135
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 27.9 bits (59), Expect = 1.1
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = -2
Query: 353 VSTSL*FRTMSTPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS*ITSSINLTLY 174
+S+SL + STP T PS+ S L PS S+ +++ V S +TS I+ T
Sbjct: 566 ISSSLTATSTSTPALTHSITPSNTSYTSSLIPSS--STDYSSSLITVCSNVTSEISSTSL 623
Query: 173 VS 168
S
Sbjct: 624 AS 625
>SPBC1271.08c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 140
Score = 27.5 bits (58), Expect = 1.5
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +1
Query: 31 SGSPGLQ----EFGTRGARSRSFGFIILNRLQSIKMIIYKDVITGDEMFSDTYKVKLID 195
S P LQ +F T SRS ILN++ M IY IT D SDTY++ D
Sbjct: 6 SSMPNLQKRHSDFKTPVYISRSIS--ILNKIFHPCMYIYSRGITNDTYSSDTYELDWYD 62
>SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 632
Score = 27.5 bits (58), Expect = 1.5
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -1
Query: 243 VLCSDHGLAGDFINNFVDQLNFIRIREHLVTSYNILIDYHFDGLE 109
V+C D GL+G+F + IR + + Y LI Y FDG E
Sbjct: 288 VMCLDLGLSGEFCTAVA---HSIREQCQMYIKYLSLIGYLFDGSE 329
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 26.6 bits (56), Expect = 2.6
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 223 TVIRTQDDIHIDGFNPSAEEADEGTDSNVE 312
T+ ++DDIH D ++ A+ DE SNVE
Sbjct: 50 TIDDSEDDIHYDDYD--ADAVDEEMPSNVE 77
>SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1842
Score = 25.8 bits (54), Expect = 4.5
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +1
Query: 7 LTRWGALNSGSPGLQEFGTRGARSRSFGFIILNRLQSIKMIIYKDVITG--DEMFSDTYK 180
L R+ + S G+Q G + A +FGF ++ ++I+ D I G DE + YK
Sbjct: 1577 LARFDRVMFPSEGIQTDGIKAASVTAFGF---GQVGGQVIVIHPDYIYGVIDEATYNAYK 1633
Query: 181 VK 186
K
Sbjct: 1634 AK 1635
>SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 25.4 bits (53), Expect = 5.9
Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = -2
Query: 353 VSTSL*FRTMSTPVSTLESVPSS-ASSAEGLNPSMW 249
V+T++ + + STPVST+ +P++ S GL +++
Sbjct: 981 VATTITYSSSSTPVSTVVVIPTAVCSGVRGLQYAVY 1016
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.4 bits (53), Expect = 5.9
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = -2
Query: 374 FLSPNAYVSTSL*FRTMSTPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS*ITS 195
F S ++ L + STP+S P+S ++ G N + + + + T L +S S
Sbjct: 682 FTSSGFNTTSGLPTSSASTPLSNSTVAPTSTFTSSGFNTTSGLPTSSVSTPLSNSSAYPS 741
Query: 194 SINLTL-YVSENISSPVI 144
S + T +S ++S +I
Sbjct: 742 SGSSTFSRLSSTLTSSII 759
>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
isomerase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 25.0 bits (52), Expect = 7.8
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1
Query: 193 DEVIYEVTGKTVIRTQDDIHIDGFNPSAEEADEGTD 300
DEV + +G I + +D + EE+DE D
Sbjct: 103 DEVFFSASGDATIHLSGNFLVDEEDEEEEESDEDYD 138
>SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1564
Score = 25.0 bits (52), Expect = 7.8
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 6/44 (13%)
Frame = +1
Query: 196 EVIYE--VTGKTVIRTQDDIHIDG---FNPSAEEA-DEGTDSNV 309
E+I E VTG +I Q+ +H+D F P+AE + +GT +
Sbjct: 501 EIIPEPNVTGNALIELQESLHLDSYGFFFPNAERSLPKGTRGRI 544
>SPBC1718.07c |zfs1|moc4|transcription factor Zfs1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 404
Score = 25.0 bits (52), Expect = 7.8
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -2
Query: 320 TPVSTLESVPSSASSAEG 267
+P+S+LES+PS +S+ G
Sbjct: 151 SPISSLESLPSRSSTGSG 168
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,452,502
Number of Sequences: 5004
Number of extensions: 51309
Number of successful extensions: 175
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 242064240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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