Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_O12
(454 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 23 2.1
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 23 2.1
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 2.1
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 2.1
L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 22 2.7
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 3.6
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 4.7
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 4.7
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 4.7
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 4.7
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 4.7
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 4.7
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 4.7
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 4.7
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 6.3
L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 21 8.3
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 22.6 bits (46), Expect = 2.1
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 397 GRRSWRTEDYQTC 435
GRRSW T + Q C
Sbjct: 351 GRRSWVTRESQIC 363
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.6 bits (46), Expect = 2.1
Identities = 9/36 (25%), Positives = 21/36 (58%)
Frame = +2
Query: 341 CREEKYYQGAGRKKTIKPAEEGAGEQRTIKPAERRK 448
C+++K G+G + TI A + + ++R A++ +
Sbjct: 580 CKKDKKNAGSGSRFTIYKANKASKKKREKSSAKKER 615
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.6 bits (46), Expect = 2.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 229 KNYLLVCWPNDCTAAVSCEVYGSV 300
K+ L+VC N CT+ +S V SV
Sbjct: 313 KDALIVCTVNSCTSMLSGIVIFSV 336
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.6 bits (46), Expect = 2.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 229 KNYLLVCWPNDCTAAVSCEVYGSV 300
K+ L+VC N CT+ +S V SV
Sbjct: 366 KDALIVCTVNSCTSMLSGIVIFSV 389
>L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein.
Length = 382
Score = 22.2 bits (45), Expect = 2.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 322 LEKKTSMSRRKILPRSWKKEDYQAR 396
+ ++ + SR+K+LP W K YQ R
Sbjct: 283 IARQMTTSRKKVLPYYWYK--YQDR 305
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 3.6
Identities = 12/62 (19%), Positives = 28/62 (45%)
Frame = +1
Query: 31 RSWKKKTIKSAEGAGRKKTNKLAEKRSWKKEDY*ACGRSWKKEDCNRRRMKNTATTEERR 210
RS + +++ R + ++ ++ S++ + +C R +E RR EE+
Sbjct: 218 RSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKKDRRYDQLHNVEEKH 277
Query: 211 LQ 216
L+
Sbjct: 278 LR 279
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.4 bits (43), Expect = 4.7
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -1
Query: 247 TPINNFFPSVVAVFFLRWL 191
TP PS + + FL+WL
Sbjct: 285 TPDRYVMPSWIKMLFLQWL 303
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.4 bits (43), Expect = 4.7
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -1
Query: 247 TPINNFFPSVVAVFFLRWL 191
TP PS + + FL+WL
Sbjct: 285 TPDRYVMPSWIKMLFLQWL 303
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.4 bits (43), Expect = 4.7
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -1
Query: 247 TPINNFFPSVVAVFFLRWL 191
TP PS + + FL+WL
Sbjct: 285 TPDRYVMPSWIKMLFLQWL 303
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.4 bits (43), Expect = 4.7
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -1
Query: 247 TPINNFFPSVVAVFFLRWL 191
TP PS + + FL+WL
Sbjct: 285 TPDRYVMPSWIKMLFLQWL 303
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 4.7
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -1
Query: 247 TPINNFFPSVVAVFFLRWL 191
TP PS + + FL+WL
Sbjct: 285 TPDRYVMPSWIKMLFLQWL 303
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.4 bits (43), Expect = 4.7
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -1
Query: 247 TPINNFFPSVVAVFFLRWL 191
TP PS + + FL+WL
Sbjct: 285 TPDRYVMPSWIKMLFLQWL 303
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 4.7
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -1
Query: 247 TPINNFFPSVVAVFFLRWL 191
TP PS + + FL+WL
Sbjct: 353 TPDRYVMPSWIKMLFLQWL 371
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 4.7
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -1
Query: 247 TPINNFFPSVVAVFFLRWL 191
TP PS + + FL+WL
Sbjct: 353 TPDRYVMPSWIKMLFLQWL 371
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.0 bits (42), Expect = 6.3
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = +1
Query: 157 EDCNRRRMKNTATTEERRLQPPKEKN 234
++C++R + T+ RL+P KN
Sbjct: 220 DNCDQRINYHFGMTDNSRLEPGTNKN 245
>L10430-1|AAA27731.1| 150|Apis mellifera transposase protein.
Length = 150
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +2
Query: 44 KRLSSLQKELEERRLTSLRKKGV 112
+ L+ L +EE+R +KGV
Sbjct: 97 EHLTKLNNAIEEKRFELTNRKGV 119
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,802
Number of Sequences: 438
Number of extensions: 2550
Number of successful extensions: 17
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11943513
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -