Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_O11
         (314 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   0.66 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   0.66 
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   3.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   3.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   3.5  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   4.7  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   4.7  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   4.7  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    20   8.1  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.4 bits (48), Expect = 0.66
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 92  IFNQTYKNLLICLNSFFLVKILKV 163
           +F+Q Y  LLI +++ + VK  K+
Sbjct: 675 LFSQLYNALLILISTVYAVKTRKI 698


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.4 bits (48), Expect = 0.66
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 92  IFNQTYKNLLICLNSFFLVKILKV 163
           +F+Q Y  LLI +++ + VK  K+
Sbjct: 765 LFSQLYNALLILISTVYAVKTRKI 788


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -3

Query: 246 IIMHTLGKTSYFIPIENLLQIGIDVYLNT 160
           +I  +LG  S+FIP+  +  + +++YL T
Sbjct: 197 VIYSSLG--SFFIPLLLMSLVYLEIYLAT 223


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -3

Query: 246 IIMHTLGKTSYFIPIENLLQIGIDVYLNT 160
           +I  +LG  S+FIP+  +  + +++YL T
Sbjct: 197 VIYSSLG--SFFIPLLLMSLVYLEIYLAT 223


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -3

Query: 246 IIMHTLGKTSYFIPIENLLQIGIDVYLNT 160
           +I  +LG  S+FIP+  +  + +++YL T
Sbjct: 197 VIYSSLG--SFFIPLLLMSLVYLEIYLAT 223


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -3

Query: 216 YFIPIENLLQIGIDVYLNTLSIFTKKKELRQIS 118
           Y IPI  L  +G+   L+      ++ ELR +S
Sbjct: 157 YKIPITKLTAMGVLNNLHDPEYSARENELRALS 189


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -3

Query: 216 YFIPIENLLQIGIDVYLNTLSIFTKKKELRQIS 118
           Y IPI  L  +G+   L+      ++ ELR +S
Sbjct: 157 YKIPITKLTAMGVLNNLHDPEYSARENELRALS 189


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -3

Query: 216 YFIPIENLLQIGIDVYLNTLSIFTKKKELRQIS 118
           Y IPI  L  +G+   L+      ++ ELR +S
Sbjct: 157 YKIPITKLTAMGVLNNLHDPEYSARENELRALS 189


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +2

Query: 56  QSNILTLQLHV*IFNQTYKNLLICLNSFFLVKILKVFKY 172
           Q+ ++ L L   I      N+L+C+  F + K+ +   Y
Sbjct: 40  QAILIALVLGSIIVGTVIGNILVCVAVFLVRKLRRPCNY 78


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,287
Number of Sequences: 438
Number of extensions: 1364
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6719922
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)