Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_O09
(498 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 97 5e-21
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 87 6e-18
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 77 8e-15
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 66 1e-11
08_01_0397 - 3509186-3510291,3510322-3512335 63 1e-10
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 63 1e-10
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 63 1e-10
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 62 3e-10
06_03_1255 + 28780181-28781172,28782065-28782932 52 3e-07
02_01_0381 - 2764331-2764342,2768966-2769907 51 6e-07
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 48 6e-06
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 45 3e-05
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 40 0.001
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 39 0.002
03_05_0865 - 28365430-28367640 38 0.003
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 38 0.006
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 34 0.073
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 32 0.29
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 30 0.90
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 29 1.6
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 28 3.6
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 28 4.8
01_07_0192 - 41888998-41890632 27 6.3
10_01_0003 + 46158-46428,46588-46706,46819-46928,48977-49415,495... 27 8.4
07_01_1218 - 11633829-11634628,11634713-11635050,11635349-116354... 27 8.4
05_04_0123 + 18210069-18213737 27 8.4
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 97.5 bits (232), Expect = 5e-21
Identities = 43/90 (47%), Positives = 59/90 (65%)
Frame = +1
Query: 229 PNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPD 408
P D SL PF K+FY +V S +V YR + ++TV G +VP P+ +F+EANFPD
Sbjct: 106 PKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPD 165
Query: 409 YVCQAIKSMGNKDPTPIQAQGWPIAMSGKN 498
Y QAI G +PTPIQ+QGWP+A+ G++
Sbjct: 166 YCMQAIAKSGFVEPTPIQSQGWPMALKGRD 195
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 87.4 bits (207), Expect = 6e-18
Identities = 38/83 (45%), Positives = 52/83 (62%)
Frame = +1
Query: 250 LQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIK 429
L F K+FY SV + EVE YR + E+TV G +VP P+ F + FP+YV Q I
Sbjct: 48 LPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEIT 107
Query: 430 SMGNKDPTPIQAQGWPIAMSGKN 498
G +PTPIQ+QGWP+A+ G++
Sbjct: 108 KAGFVEPTPIQSQGWPMALRGRD 130
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 77.0 bits (181), Expect = 8e-15
Identities = 36/86 (41%), Positives = 48/86 (55%)
Frame = +1
Query: 241 SLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQ 420
++ +PFNKDFY SV S EV DY + VSG +VP PI+ F + FP +
Sbjct: 173 TIEYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMN 232
Query: 421 AIKSMGNKDPTPIQAQGWPIAMSGKN 498
AI G + PT IQ Q PI +SG++
Sbjct: 233 AIAKQGYEKPTTIQCQALPIVLSGRD 258
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 66.5 bits (155), Expect = 1e-11
Identities = 29/56 (51%), Positives = 36/56 (64%)
Frame = +1
Query: 319 EDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGNKDPTPIQAQGWPIAM 486
E YR++HE+TV G VP PI FE FP + + I+ G PTPIQAQ WPIA+
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIAL 185
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 63.3 bits (147), Expect = 1e-10
Identities = 31/85 (36%), Positives = 47/85 (55%)
Frame = +1
Query: 244 LSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQA 423
+ QPF K+FY K + + EV YR + E+ V G +VP PI+ + ++ +
Sbjct: 379 IDYQPFRKNFYIEVKDITKMAAEEVAAYRKQLELKVHGKDVPKPIKTWVQSGLTSKLLDT 438
Query: 424 IKSMGNKDPTPIQAQGWPIAMSGKN 498
IK +G + P IQAQ PI MSG++
Sbjct: 439 IKKLGFEKPMSIQAQALPIIMSGRD 463
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 63.3 bits (147), Expect = 1e-10
Identities = 26/60 (43%), Positives = 36/60 (60%)
Frame = +1
Query: 319 EDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGNKDPTPIQAQGWPIAMSGKN 498
E YR KHE+T+ G E P P F+ FP + + ++ G PTPIQAQ WPIA+ ++
Sbjct: 160 EAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILREVQQAGFSAPTPIQAQSWPIALRNRD 219
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 62.9 bits (146), Expect = 1e-10
Identities = 31/85 (36%), Positives = 46/85 (54%)
Frame = +1
Query: 244 LSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQA 423
+ QPF K+ Y K + + EV YR E+ V G +VP PI+ + ++ +
Sbjct: 240 IEYQPFRKNLYIEVKDITMMTGEEVATYRKNLELKVHGKDVPKPIKTWVQSGLTSKLLDT 299
Query: 424 IKSMGNKDPTPIQAQGWPIAMSGKN 498
IK +G + P PIQAQ PI MSG++
Sbjct: 300 IKKLGFEKPMPIQAQALPIIMSGRD 324
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 61.7 bits (143), Expect = 3e-10
Identities = 27/58 (46%), Positives = 34/58 (58%)
Frame = +1
Query: 325 YRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGNKDPTPIQAQGWPIAMSGKN 498
YR HEVT G VP P FE FP + Q I + G +PTPIQAQ WP+A+ ++
Sbjct: 586 YRQHHEVTAVGENVPPPFMTFEATGFPPEILQEIHAAGFLNPTPIQAQTWPVALQNRD 643
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 51.6 bits (118), Expect = 3e-07
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +1
Query: 295 LDRSPYEVED-YRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGNKDPTPIQAQG 471
L R P D R + V G +VP P F + P+ + +A++ G + PTPIQ QG
Sbjct: 144 LRRMPRSRADALRRSWHILVDGDDVPPPSRSFGDLRLPEPILRALRGKGIEKPTPIQVQG 203
Query: 472 WPIAMSGKN 498
P+A+SG++
Sbjct: 204 LPVALSGRD 212
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 50.8 bits (116), Expect = 6e-07
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = +1
Query: 313 EVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGNKDPTPIQAQGWPIAMSG 492
+ ++ R K + V G +VP P F + P+ + + ++ G PTPIQ QG P+ +SG
Sbjct: 160 KADELRRKWHILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSG 219
Query: 493 KN 498
++
Sbjct: 220 RD 221
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 47.6 bits (108), Expect = 6e-06
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Frame = +1
Query: 328 RNKHEVTVSGVEVPNPIEHFEEA----NFPDYVCQAIKSMGNKDPTPIQAQGWPIAMSGK 495
R K ++ +SG VP P+E+FEE Y+ + +G ++PTPIQ Q PI +SG+
Sbjct: 125 RKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPILLSGR 184
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 45.2 bits (102), Expect = 3e-05
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +1
Query: 343 VTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGNKDPTPIQAQGWPIAMSGKN 498
V VSG +VP P + FE A + V + + G + PTP+Q PIA++G++
Sbjct: 72 VEVSGEDVPPPADGFEAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGRD 123
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/62 (27%), Positives = 35/62 (56%)
Frame = +1
Query: 313 EVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGNKDPTPIQAQGWPIAMSG 492
++ R+K ++ V G +VP+PI F + P+ + +++ G PTP+Q Q P ++
Sbjct: 160 QIASLRSKLDICVKGEDVPDPIMCFSSSGLPEKLVLNLEAAGYVMPTPVQMQVIPSSICN 219
Query: 493 KN 498
++
Sbjct: 220 RS 221
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 39.1 bits (87), Expect = 0.002
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Frame = +1
Query: 208 GGQNMRRPNWDSLSLQP---FNKDFYNPHKSVLDRSPYEVE-DYRNKHEVTVSGVEVPNP 375
GG N R P WD +P N + + D + + D V SG +VP P
Sbjct: 177 GGWNSR-PGWDRRDREPNPFANSEAEEATEVDFDTANTGINFDAYEDIPVETSGHDVPPP 235
Query: 376 IEHFEEANFPDYVCQAIKSMGNKDPTPIQAQGWPIAMSGKN 498
+ F E + D + + I+ PTP+Q PI+++G++
Sbjct: 236 VNTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRD 276
>03_05_0865 - 28365430-28367640
Length = 736
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/71 (22%), Positives = 37/71 (52%)
Frame = +1
Query: 286 KSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGNKDPTPIQA 465
KS+ + + + +R ++ G +VP P+ + E+ + +A++ G K+P+PIQ
Sbjct: 284 KSLDEMTERDWRIFREDFNISYKGSKVPRPMRKWSESKLGTELLRAVEKAGYKEPSPIQM 343
Query: 466 QGWPIAMSGKN 498
P+ + ++
Sbjct: 344 ASIPLGLQQRD 354
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 37.5 bits (83), Expect = 0.006
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Frame = +1
Query: 208 GGQNMRRPNWDSLSLQPFNKDFYNPHKSVLD----RSPYEVEDYRNKHEVTVSGVEVPNP 375
G N R WD +P F N + +D + E Y + V SG +VP P
Sbjct: 265 GAWNSRPGGWDRRDREP--DPFANSEAAEVDFEGENTGINFEAYEDI-PVETSGHDVPPP 321
Query: 376 IEHFEEANFPDYVCQAIKSMGNKDPTPIQAQGWPIAMSGKN 498
F E + D + + I+ PTP+Q PI+++G++
Sbjct: 322 ANTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRD 362
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 33.9 bits (74), Expect = 0.073
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 343 VTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGNKDPTPIQAQGWPIAMSGKN 498
V SG EVP P+ F E + + I+ PTP+Q PI+++G++
Sbjct: 143 VETSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGRD 194
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 31.9 bits (69), Expect = 0.29
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1
Query: 385 FEEANFPDYVCQAIKSMGNKDPTPIQAQGWPIAMSGKN 498
F E N + +A +++G + PTPIQA P+A++G++
Sbjct: 196 FLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGRD 233
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 30.3 bits (65), Expect = 0.90
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 373 PIEHFEEANFPDYVCQAIKSMGNKDPTPIQAQGWPIAMSGKN 498
P+ F P V K G + P+PIQA WP + G++
Sbjct: 92 PLSSFAATALPPQVLDCCK--GFERPSPIQAYAWPYLLDGRD 131
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +1
Query: 433 MGNKDPTPIQAQGWPIAMSGKN 498
MG + PT IQAQ P+AMSG++
Sbjct: 42 MGFQAPTRIQAQAIPVAMSGQH 63
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 385 FEEANFPDYVCQAIKSMGNKDPTPIQAQGWPIAMSGKN 498
F E + A +MG K+PT IQA+ P A+ G++
Sbjct: 43 FAELGVVPELVAACDAMGWKEPTRIQAEAIPHALEGRD 80
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +1
Query: 385 FEEANFPDYVCQAIKSMGNKDPTPIQAQGWPIAMSGKN 498
F+E + + +A++ G TPIQ + P+ + GK+
Sbjct: 85 FDELGLDEQLKRALRKKGLDKATPIQREAIPLILEGKD 122
>01_07_0192 - 41888998-41890632
Length = 544
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Frame = +1
Query: 352 SGVEVPNP--IEHFEEANFPDYV 414
SGV NP ++HF A+FP+YV
Sbjct: 84 SGVATANPAVVDHFLRASFPNYV 106
>10_01_0003 +
46158-46428,46588-46706,46819-46928,48977-49415,
49511-49633,49805-50106,50143-50350,50729-51448
Length = 763
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 277 NPHKSVLDRS--PYEVEDYRNKHEVTVSGVEVPNPIEHFEEAN 399
N +S+LD YE + +++E+T+S PN E +AN
Sbjct: 234 NNAESILDEGYISYEAQTPADRYEITISDNGQPNDYESLVDAN 276
>07_01_1218 -
11633829-11634628,11634713-11635050,11635349-11635445,
11635482-11635725,11636114-11636122
Length = 495
Score = 27.1 bits (57), Expect = 8.4
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +1
Query: 262 NKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGN 441
NK YN +++ R+P + E Y N ++ EV P+E F D IK MG
Sbjct: 137 NKHKYNELGNIIPRTPTDQEKYGNNSSYILNIEEVILPLE------FGDSDLNIIKIMGK 190
Query: 442 KDP 450
P
Sbjct: 191 YFP 193
>05_04_0123 + 18210069-18213737
Length = 1222
Score = 27.1 bits (57), Expect = 8.4
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 368 LILLNILK-RQTFQIMCVKQ*KVWVTKILPLYRLKDGQSL 484
+ L NI+K + T I C+K VW L + RLKD + L
Sbjct: 778 ITLRNIVKLKVTDSINCMKLPSVWKLPFLEVLRLKDMKKL 817
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,054,506
Number of Sequences: 37544
Number of extensions: 207225
Number of successful extensions: 450
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 449
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -