Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_O09
(498 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 75 2e-14
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 60 7e-10
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 56 1e-08
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 48 3e-06
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 44 8e-05
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 43 1e-04
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 43 1e-04
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 43 1e-04
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 42 2e-04
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 38 0.005
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 36 0.022
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 31 0.61
Z66495-13|CAA91278.1| 722|Caenorhabditis elegans Hypothetical p... 30 0.81
Z35602-3|CAA84672.1| 722|Caenorhabditis elegans Hypothetical pr... 30 0.81
AC006790-13|AAF60737.2| 351|Caenorhabditis elegans Serpentine r... 29 1.9
Z92834-9|CAB07386.2| 192|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81089-2|CAB03136.1| 259|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z74036-3|CAA98488.1| 517|Caenorhabditis elegans Hypothetical pr... 28 4.3
AL117195-3|CAB55009.1| 629|Caenorhabditis elegans Hypothetical ... 28 4.3
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 28 4.3
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 28 4.3
U29379-7|ABC71826.1| 710|Caenorhabditis elegans Patterned expre... 27 10.0
U29379-6|AAF99981.3| 677|Caenorhabditis elegans Patterned expre... 27 10.0
U29379-5|ABC71825.1| 777|Caenorhabditis elegans Patterned expre... 27 10.0
AF036693-3|AAO61431.1| 544|Caenorhabditis elegans Hypothetical ... 27 10.0
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 75.4 bits (177), Expect = 2e-14
Identities = 37/98 (37%), Positives = 59/98 (60%)
Frame = +1
Query: 205 AGGQNMRRPNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEH 384
AGG+ +R +W + +L P KDFY+ + +V R YE++ + + ++VT+ G VP P+
Sbjct: 73 AGGR-LRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFE 131
Query: 385 FEEANFPDYVCQAIKSMGNKDPTPIQAQGWPIAMSGKN 498
F EA P + + + K PT IQ+ WPIAMSG++
Sbjct: 132 FNEAPLPGQIHELLYGKFQK-PTVIQSISWPIAMSGRD 168
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 60.5 bits (140), Expect = 7e-10
Identities = 26/71 (36%), Positives = 42/71 (59%)
Frame = +1
Query: 286 KSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGNKDPTPIQA 465
K + + S + +R +++ G VP P+ ++EEA FPD V QA+K +G +PTPIQ
Sbjct: 270 KELSEMSDRDWRIFREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQR 329
Query: 466 QGWPIAMSGKN 498
Q PI + ++
Sbjct: 330 QAIPIGLQNRD 340
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 56.4 bits (130), Expect = 1e-08
Identities = 27/85 (31%), Positives = 45/85 (52%)
Frame = +1
Query: 244 LSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQA 423
+ Q FNK+FY H+ + +V +N + V G++ P P+ F +F + +A
Sbjct: 220 IQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEA 279
Query: 424 IKSMGNKDPTPIQAQGWPIAMSGKN 498
I+ + PTPIQA P A+SG++
Sbjct: 280 IRKSEYEQPTPIQAMAIPSALSGRD 304
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 48.4 bits (110), Expect = 3e-06
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Frame = +1
Query: 211 GQNMRRPNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHE-VTVSGVEVPNPIEHF 387
G+ + + + + + F K+FY + + + EV+ YR + + +TV G++ P PI+ +
Sbjct: 247 GRMLAQTDHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTW 306
Query: 388 EEANFPDYVCQAIKSMGNKDPTPIQAQGWPIAMSGKN 498
+ + +K PT IQAQ P MSG++
Sbjct: 307 AQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRD 343
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 43.6 bits (98), Expect = 8e-05
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +1
Query: 274 YNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAI-KSMGNKDP 450
+ P + +S + E R + ++ G +P PI F E FP + + + K G P
Sbjct: 154 WRPPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTP 213
Query: 451 TPIQAQGWPIAMSGKN 498
T IQ QG P+A+SG++
Sbjct: 214 TAIQIQGIPVALSGRD 229
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +1
Query: 343 VTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGNKDPTPIQAQGWPIAMSGKN 498
V VSG VP IEHF EA F V + + G PTP+Q P ++ ++
Sbjct: 127 VEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +1
Query: 343 VTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGNKDPTPIQAQGWPIAMSGKN 498
V VSG VP IEHF EA F V + + G PTP+Q P ++ ++
Sbjct: 111 VEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 162
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +1
Query: 343 VTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGNKDPTPIQAQGWPIAMSGKN 498
V VSG VP IEHF EA F V + + G PTP+Q P ++ ++
Sbjct: 108 VEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 159
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 41.9 bits (94), Expect = 2e-04
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Frame = +1
Query: 250 LQPFNKDFYNPHKSVLDRSPYEVED-YRNKHEVTV------SGVEVPNPIEHFEEANFPD 408
++P +D Y + SP ++++ Y N + V S V++P P+ FE+A +
Sbjct: 33 MKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAFGSN 92
Query: 409 Y-VCQAIKSMGNKDPTPIQAQGWPIAMSGKN 498
+ I+ G + P+PIQ+Q WP+ +SG++
Sbjct: 93 ASIMGEIRKNGFEKPSPIQSQMWPLLLSGQD 123
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 37.5 bits (83), Expect = 0.005
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1
Query: 343 VTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGNKDPTPIQAQGWPIAMSGKN 498
V +G +VP PI F + + +++ + IK+ G PTP+Q P G++
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRD 205
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 35.5 bits (78), Expect = 0.022
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 385 FEEANFPDYVCQAIKSMGNKDPTPIQAQGWPIAMSGKN 498
FE+ N + +A G DPTPIQ P+A++GK+
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKD 187
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 30.7 bits (66), Expect = 0.61
Identities = 14/61 (22%), Positives = 27/61 (44%)
Frame = +1
Query: 316 VEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGNKDPTPIQAQGWPIAMSGK 495
++D R + + G +PN I F +++ + + + P+PIQ Q P +
Sbjct: 105 LDDIRRTNRIFTWGDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERR 164
Query: 496 N 498
N
Sbjct: 165 N 165
>Z66495-13|CAA91278.1| 722|Caenorhabditis elegans Hypothetical
protein R13G10.4 protein.
Length = 722
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/54 (25%), Positives = 30/54 (55%)
Frame = +2
Query: 311 MK*RTIETNTKSLLVELKYLILLNILKRQTFQIMCVKQ*KVWVTKILPLYRLKD 472
+K RT++ K + +E+ +LLN +K F CV + + +K++ + ++D
Sbjct: 409 LKDRTVKFAVKYVNIEMNAHLLLNRMKTGDFHFACVVEYSAYDSKVVGIITIED 462
>Z35602-3|CAA84672.1| 722|Caenorhabditis elegans Hypothetical
protein R13G10.4 protein.
Length = 722
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/54 (25%), Positives = 30/54 (55%)
Frame = +2
Query: 311 MK*RTIETNTKSLLVELKYLILLNILKRQTFQIMCVKQ*KVWVTKILPLYRLKD 472
+K RT++ K + +E+ +LLN +K F CV + + +K++ + ++D
Sbjct: 409 LKDRTVKFAVKYVNIEMNAHLLLNRMKTGDFHFACVVEYSAYDSKVVGIITIED 462
>AC006790-13|AAF60737.2| 351|Caenorhabditis elegans Serpentine
receptor, class z protein5 protein.
Length = 351
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 435 HTFYCLTHIIWKVCLFKMFNRIRYFNSTNSDFVFVSIVLYFI 310
H C+ +I +CLF+MF + N D V YFI
Sbjct: 64 HRLICVMLVILLLCLFEMFYGFKIMNMLELDLFDVLYHYYFI 105
>Z92834-9|CAB07386.2| 192|Caenorhabditis elegans Hypothetical
protein F39B2.5 protein.
Length = 192
Score = 28.7 bits (61), Expect = 2.5
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Frame = +1
Query: 247 SLQPF-NKDFYNPHKSV---LDRS---PYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFP 405
S QP+ ++D++N + + L++S E+ YR HE + V + P+ E
Sbjct: 76 SRQPYVSRDYWNLVEIIERSLEQSLTGQQEMLHYRRGHEAEAARVNLTRPLTKRELLPSL 135
Query: 406 DYVCQ-AIKSMGNKDPTP 456
Y+C+ +K+ K PTP
Sbjct: 136 QYLCRFTLKTSQQKPPTP 153
>Z81089-2|CAB03136.1| 259|Caenorhabditis elegans Hypothetical
protein F53H4.3 protein.
Length = 259
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 253 QPFNKDFYNPHKSVLDRSPYE-VEDYRNKHEVTVSGVEVPNPIEHFEEANFP 405
QP N+D Y + +L+ Y+ D N+++ G +VPNP E P
Sbjct: 200 QPNNRDTYL-NNLLLEIEEYDDFLDQVNQYKTRYPGAQVPNPYRSLPEGKLP 250
>Z74036-3|CAA98488.1| 517|Caenorhabditis elegans Hypothetical
protein F55C10.4 protein.
Length = 517
Score = 27.9 bits (59), Expect = 4.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 474 PSLSLYRGRIFVTHTFYCLTHIIWKVCL 391
P L Y + F+ TF+C+T K+CL
Sbjct: 3 PRLPRYFLKYFIIFTFFCVTFCFLKLCL 30
>AL117195-3|CAB55009.1| 629|Caenorhabditis elegans Hypothetical
protein Y57A10A.4 protein.
Length = 629
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 280 PHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEH-FEEANFPDY 411
PH +L+ P+E +D K+ V G P PIE F++ N D+
Sbjct: 416 PHVPILN-PPFESDDEEVKYIGAVKGQPKPGPIESVFDQINNRDH 459
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 412 VCQAIKSMGNKDPTPIQAQGWPIAMSGKN 498
V +AI+ G PTPIQ + P M GK+
Sbjct: 35 VYKAIEKKGFNQPTPIQRKTIPCIMDGKD 63
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 412 VCQAIKSMGNKDPTPIQAQGWPIAMSGKN 498
V +AI+ G PTPIQ + P M GK+
Sbjct: 35 VYKAIEKKGFNQPTPIQRKTIPCIMDGKD 63
>U29379-7|ABC71826.1| 710|Caenorhabditis elegans Patterned
expression site protein22, isoform c protein.
Length = 710
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 359 LKYLILLNILKRQTFQIMCVKQ*KVWVTKILPLYRLKD 472
L +I LN+LK +T I+C+ + +P+ LKD
Sbjct: 499 LSEMIDLNLLKNKTMMILCISNLLGMMGFYIPIMFLKD 536
>U29379-6|AAF99981.3| 677|Caenorhabditis elegans Patterned
expression site protein22, isoform a protein.
Length = 677
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 359 LKYLILLNILKRQTFQIMCVKQ*KVWVTKILPLYRLKD 472
L +I LN+LK +T I+C+ + +P+ LKD
Sbjct: 444 LSEMIDLNLLKNKTMMILCISNLLGMMGFYIPIMFLKD 481
>U29379-5|ABC71825.1| 777|Caenorhabditis elegans Patterned
expression site protein22, isoform b protein.
Length = 777
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 359 LKYLILLNILKRQTFQIMCVKQ*KVWVTKILPLYRLKD 472
L +I LN+LK +T I+C+ + +P+ LKD
Sbjct: 499 LSEMIDLNLLKNKTMMILCISNLLGMMGFYIPIMFLKD 536
>AF036693-3|AAO61431.1| 544|Caenorhabditis elegans Hypothetical
protein C49A9.8 protein.
Length = 544
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 323 TIETNTKSLLVELKYLILLNILKR 394
T++TN KSL ++ K+ +LNI K+
Sbjct: 291 TVKTNEKSLKIDKKWDAILNIRKK 314
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,381,362
Number of Sequences: 27780
Number of extensions: 187227
Number of successful extensions: 623
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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