Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_O05
(512 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 165 2e-41
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 163 7e-41
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 158 3e-39
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 157 4e-39
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 149 2e-36
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 135 2e-32
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 130 8e-31
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 79 2e-15
08_02_1528 + 27666356-27667081 31 0.54
11_01_0419 + 3226224-3226756,3228010-3228169,3228256-3228435,322... 29 2.2
10_07_0052 - 12382975-12383141,12384032-12384458,12385047-12385097 29 2.9
02_01_0167 - 1159231-1159263,1159348-1159419,1159957-1160052,116... 28 3.8
07_03_1647 + 28370226-28370369,28370452-28370611,28370704-283708... 28 5.1
08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034 27 6.7
08_02_1388 + 26649874-26649905,26650243-26650365,26650980-266510... 27 8.8
03_05_0615 + 26137785-26138593,26139307-26141368 27 8.8
02_05_0699 + 31013176-31013345,31013749-31013872,31013950-310140... 27 8.8
01_06_0343 + 28566513-28566644,28566791-28568494,28569178-285692... 27 8.8
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 165 bits (401), Expect = 2e-41
Identities = 84/138 (60%), Positives = 104/138 (75%), Gaps = 4/138 (2%)
Frame = +2
Query: 110 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 283
S + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 279
Query: 284 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVNVEKELREICYDVLCLLDKHLIPKASN 457
ARR+SWR+ISSIEQK E G+E + + KEYR +E EL +IC +L LLD HL+P ++
Sbjct: 280 ARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTA 339
Query: 458 PESKVFYLKMKGDYYRYL 511
PESKVFYLKMKGDYYRYL
Sbjct: 340 PESKVFYLKMKGDYYRYL 357
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 163 bits (396), Expect = 7e-41
Identities = 82/138 (59%), Positives = 105/138 (76%), Gaps = 4/138 (2%)
Frame = +2
Query: 110 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 283
S+ + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 61
Query: 284 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVNVEKELREICYDVLCLLDKHLIPKASN 457
ARR+SWR+ISSIEQK E G+E + + K+YR +E EL +IC +L LL+ HL+P ++
Sbjct: 62 ARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTA 121
Query: 458 PESKVFYLKMKGDYYRYL 511
PESKVFYLKMKGDYYRYL
Sbjct: 122 PESKVFYLKMKGDYYRYL 139
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 158 bits (383), Expect = 3e-39
Identities = 83/137 (60%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Frame = +2
Query: 113 STMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGV--ELSNEERNLLSVAYKNVVGA 286
S +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GA
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGA 61
Query: 287 RRSSWRVISSIEQKTE--GSERKQQMAKEYRVNVEKELREICYDVLCLLDKHLIPKASNP 460
RR+SWR+ISSIEQK E G+E KEYR +E EL +IC +L LLD HL+P A+
Sbjct: 62 RRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSATAA 121
Query: 461 ESKVFYLKMKGDYYRYL 511
ESKVFYLKMKGDY+RYL
Sbjct: 122 ESKVFYLKMKGDYHRYL 138
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 157 bits (382), Expect = 4e-39
Identities = 80/133 (60%), Positives = 101/133 (75%), Gaps = 4/133 (3%)
Frame = +2
Query: 125 VDKEELVQRAKLAEQAERYDDMAAAMKEVTETG--VELSNEERNLLSVAYKNVVGARRSS 298
+ +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GARR+S
Sbjct: 1 MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRAS 60
Query: 299 WRVISSIEQKTEG--SERKQQMAKEYRVNVEKELREICYDVLCLLDKHLIPKASNPESKV 472
WR++SSIEQK EG +E + KEYR +E EL +IC +L LLD HL+P ++ ESKV
Sbjct: 61 WRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKV 120
Query: 473 FYLKMKGDYYRYL 511
FYLKMKGDY+RYL
Sbjct: 121 FYLKMKGDYHRYL 133
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 149 bits (360), Expect = 2e-36
Identities = 77/134 (57%), Positives = 97/134 (72%), Gaps = 7/134 (5%)
Frame = +2
Query: 131 KEELVQRAKLAEQAERYDDMAAAMKEVTET-----GVELSNEERNLLSVAYKNVVGARRS 295
+EE+V AKLAEQAERY++M M++V G EL+ EERNLLSVAYKNV+GARR+
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69
Query: 296 SWRVISSIEQKTE--GSERKQQMAKEYRVNVEKELREICYDVLCLLDKHLIPKASNPESK 469
SWR++SSIEQK E G+ A+ YR VE EL IC +L LLD+ L+P A+ ++K
Sbjct: 70 SWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAAAAVDAK 129
Query: 470 VFYLKMKGDYYRYL 511
VFYLKMKGDY+RYL
Sbjct: 130 VFYLKMKGDYHRYL 143
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 135 bits (326), Expect = 2e-32
Identities = 62/128 (48%), Positives = 88/128 (68%)
Frame = +2
Query: 128 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 307
++E++V+ AKLAEQAERYDDM MK + V++S EER L SV +K +GARR+SWR+
Sbjct: 3 EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSVGFKKTIGARRASWRI 62
Query: 308 ISSIEQKTEGSERKQQMAKEYRVNVEKELREICYDVLCLLDKHLIPKASNPESKVFYLKM 487
+ S+EQK ++ Y+ VE ELR +C +VL ++ H +P A++ E+ VF+ KM
Sbjct: 63 LESLEQKVTAGDQPGVTINGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKM 122
Query: 488 KGDYYRYL 511
KGDYYRYL
Sbjct: 123 KGDYYRYL 130
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 130 bits (313), Expect = 8e-31
Identities = 64/99 (64%), Positives = 73/99 (73%), Gaps = 2/99 (2%)
Frame = +2
Query: 221 GVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMA--KEYRVNVEKEL 394
G EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK EG A + YR +E EL
Sbjct: 18 GEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAEL 77
Query: 395 REICYDVLCLLDKHLIPKASNPESKVFYLKMKGDYYRYL 511
IC +L LLD HL+P A ESKVFYLKMKGDY+RYL
Sbjct: 78 ARICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYL 116
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 79.4 bits (187), Expect = 2e-15
Identities = 47/110 (42%), Positives = 64/110 (58%), Gaps = 2/110 (1%)
Frame = +2
Query: 188 MAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIE--QKTEGSERKQQMA 361
M AM V + L+ EERNLLSV YKN++GA+R++ R+I SIE ++T+G E +
Sbjct: 1 MVEAMNSVAKLDEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQT 60
Query: 362 KEYRVNVEKELREICYDVLCLLDKHLIPKASNPESKVFYLKMKGDYYRYL 511
EYR VE E+ +IC DV+ ++DK KGDYYRYL
Sbjct: 61 AEYRRKVEAEMDKICCDVINIIDK------------------KGDYYRYL 92
>08_02_1528 + 27666356-27667081
Length = 241
Score = 31.1 bits (67), Expect = 0.54
Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
Frame = +2
Query: 98 QYLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNV 277
QY T V K+ K A + + + E E + + +LLS K +
Sbjct: 124 QYFIRLTKKVQKQSKKISKKSASAEQEGSRVIKLLAEAREVAISMLESSSHLLS---KKI 180
Query: 278 VGARRSSWRVISSIEQKTE-GSERKQQMAKEYRV 376
+ S W ++S QKT + +Q A E+ +
Sbjct: 181 TTSNSSKWSLVSKAFQKTRLACQEEQLQALEFAI 214
>11_01_0419 +
3226224-3226756,3228010-3228169,3228256-3228435,
3228525-3228659,3229262-3229344,3229442-3229535,
3229649-3229735
Length = 423
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 190 GGRDEGSDGNRRRAQQ-RRKKPSFRCL*KCGRRPTVIM 300
G E +DG RRR++Q RR++P R + G RP++ M
Sbjct: 91 GSAAEAADGGRRRSRQGRRRRPQRRR--RRGSRPSLFM 126
>10_07_0052 - 12382975-12383141,12384032-12384458,12385047-12385097
Length = 214
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 345 LSDPSVFCSIEEMTRHDDRRAPTTFL*ATERR 250
L+D S CSI ++TR D + A T TER+
Sbjct: 154 LADKSTGCSIRKITRSDKKPAKTRSFVETERK 185
>02_01_0167 -
1159231-1159263,1159348-1159419,1159957-1160052,
1160248-1160358,1160768-1160800,1160963-1161076
Length = 152
Score = 28.3 bits (60), Expect = 3.8
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 243 KETFFPLLIKMWSAPDGHH-GESFPLLNRKPKGRKENNRWQ 362
+E PLL+++++ GHH E F + ++PK + W+
Sbjct: 36 REKTCPLLLRVFTKVGGHHQNEEFAVRGKEPKDEVQIYTWK 76
>07_03_1647 +
28370226-28370369,28370452-28370611,28370704-28370831,
28372512-28372628,28372729-28372782,28372985-28373075,
28373517-28373688,28374452-28374573,28374726-28374817,
28375331-28375373,28375596-28375656,28376367-28376515,
28376659-28376729,28376805-28376975,28377056-28377124,
28377427-28377528,28377629-28377697,28378060-28378138,
28378238-28378337,28378438-28378513,28378715-28378894,
28379430-28379552,28379634-28379717,28380068-28380252,
28380339-28380477,28380585-28380644,28380926-28381030,
28381332-28381445
Length = 1019
Score = 27.9 bits (59), Expect = 5.1
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Frame = +2
Query: 236 NEERNLLSVAYKNVVGARRSSW-RVISSIEQKTEGSERKQQMAKEYRVNVEKELREICYD 412
N + LLS AY N+ W + ISS+ Q+ S ++ Y+ ++ K L +
Sbjct: 291 NTKNALLSSAYVNLCCKESIKWTKHISSLCQRVLLSGPAG--SEIYQESLVKALTKHFGA 348
Query: 413 VLCLLDKHLIPKASNPESKVFYLKMKGDYYRYL 511
L ++D L+ + +SK KGD RY+
Sbjct: 349 KLLIIDPSLLASGQSSKSKESESYKKGDRVRYI 381
>08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034
Length = 930
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Frame = +2
Query: 389 ELREICYDVLCLLDKHLIPKASNPES-----KVFYLKMKG 493
+LRE+ YD+ LD+ L+ A+ P S K+ K+KG
Sbjct: 71 DLRELSYDMEDSLDRFLVKSAAEPGSCKKLFKILLTKIKG 110
>08_02_1388 +
26649874-26649905,26650243-26650365,26650980-26651013,
26651792-26651893,26652174-26652241,26652518-26652571,
26653139-26653211,26653428-26653537,26653615-26653719,
26653842-26653941,26653979-26654088,26656234-26656306,
26656429-26656484,26656576-26656702
Length = 388
Score = 27.1 bits (57), Expect = 8.8
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = +2
Query: 185 DMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAK 364
++A +KE + T + E L V N +G R +SSI + G + ++Q +
Sbjct: 246 ELARQLKESSLTMHQSVQETEKLWYVDIGNCLGRSLIPPRELSSIAWRALGVQPREQQS- 304
Query: 365 EYRVNVEKELR-EICYDVLCLLDKHLIPKASNPESKV 472
++ ++ E R I Y L +DK L P E V
Sbjct: 305 DFEIDYGSEERASIVYKTLA-VDKELQPDKVKREMSV 340
>03_05_0615 + 26137785-26138593,26139307-26141368
Length = 956
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 152 AKLAEQAE-RYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWR 304
+KLA AE +Y D+ +E+T ELS+ LL +A + ++ WR
Sbjct: 13 SKLATLAEQKYGDVRRIRREITFLTDELSSMNALLLKLADMEELDSQLKEWR 64
>02_05_0699 +
31013176-31013345,31013749-31013872,31013950-31014032,
31014106-31014217,31014297-31014401,31014809-31014859,
31015893-31015979,31016325-31016402,31016477-31016530,
31016608-31016892
Length = 382
Score = 27.1 bits (57), Expect = 8.8
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Frame = +2
Query: 125 VDKEELVQRAKLAEQAERYDDMAAAMKEVTET-GVELSN-----EERNLLSVAYKNVVGA 286
V+ + L +R++L++ Y ++ A E+T E+ +ERN + +Y N
Sbjct: 250 VEAKILAKRSELSKFESEYREVLAKFTEMTSRYAQEMQTIDELLKERNAIHASYTNNTTL 309
Query: 287 RRSSWRVISSIEQKTEGSERKQQMAKE 367
+RSS K S+ Q + KE
Sbjct: 310 QRSSSSNKGKTSSKESKSDDDQTVKKE 336
>01_06_0343 +
28566513-28566644,28566791-28568494,28569178-28569240,
28569241-28569310,28570438-28570715,28571886-28571963,
28573017-28573715,28573811-28573913,28574096-28574196,
28574272-28574446,28574843-28575013,28575534-28575634,
28575706-28575771
Length = 1246
Score = 27.1 bits (57), Expect = 8.8
Identities = 19/84 (22%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Frame = +2
Query: 161 AEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGAR---RSSWRVISSIEQKT 331
A AE ++ A KE+ +E+ + + A +++V + +SS R I ++++
Sbjct: 129 ARYAEVVQELDQAKKELLRLRLEVRSAAE-AKAKAERDIVASACTIQSSLRAIDEMKRRV 187
Query: 332 EGSERKQQMAKEYRVNVEKELREI 403
+ + + + + R+ E+E REI
Sbjct: 188 DEANEEHVLVELARIEAERERREI 211
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,358,833
Number of Sequences: 37544
Number of extensions: 258453
Number of successful extensions: 822
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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