Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_O01
         (616 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49099-1|CAA88921.1|  368|Homo sapiens spermine synthase protein.      54   4e-07
U53331-1|AAD08634.1|  349|Homo sapiens spermidine aminopropyltra...    54   4e-07
BC085621-1|AAH85621.1|  366|Homo sapiens spermine synthase protein.    54   4e-07
BC009898-1|AAH09898.1|  366|Homo sapiens spermine synthase protein.    54   4e-07
AD001528-1|AAB61308.1|  366|Homo sapiens spermidine aminopropylt...    54   4e-07

>Z49099-1|CAA88921.1|  368|Homo sapiens spermine synthase protein.
          Length = 368

 Score = 54.0 bits (124), Expect = 4e-07
 Identities = 24/59 (40%), Positives = 36/59 (61%)
 Frame = +2

Query: 20  SFKILNPTGKFMTHGNGATSPNSLELYEQELHKLNPLVSYNRSKVFVPSFLEDWIFYHI 196
           S K+L   GK+ T GN      +L LYE++L +L   V +++  V VPS+LE W+FY +
Sbjct: 304 SMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCPVEFSKEIVCVPSYLELWVFYTV 362


>U53331-1|AAD08634.1|  349|Homo sapiens spermidine
           aminopropyltransferase protein.
          Length = 349

 Score = 54.0 bits (124), Expect = 4e-07
 Identities = 24/59 (40%), Positives = 36/59 (61%)
 Frame = +2

Query: 20  SFKILNPTGKFMTHGNGATSPNSLELYEQELHKLNPLVSYNRSKVFVPSFLEDWIFYHI 196
           S K+L   GK+ T GN      +L LYE++L +L   V +++  V VPS+LE W+FY +
Sbjct: 285 SMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCPVEFSKEIVCVPSYLELWVFYTV 343


>BC085621-1|AAH85621.1|  366|Homo sapiens spermine synthase protein.
          Length = 366

 Score = 54.0 bits (124), Expect = 4e-07
 Identities = 24/59 (40%), Positives = 36/59 (61%)
 Frame = +2

Query: 20  SFKILNPTGKFMTHGNGATSPNSLELYEQELHKLNPLVSYNRSKVFVPSFLEDWIFYHI 196
           S K+L   GK+ T GN      +L LYE++L +L   V +++  V VPS+LE W+FY +
Sbjct: 302 SMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCPVEFSKEIVCVPSYLELWVFYTV 360


>BC009898-1|AAH09898.1|  366|Homo sapiens spermine synthase protein.
          Length = 366

 Score = 54.0 bits (124), Expect = 4e-07
 Identities = 24/59 (40%), Positives = 36/59 (61%)
 Frame = +2

Query: 20  SFKILNPTGKFMTHGNGATSPNSLELYEQELHKLNPLVSYNRSKVFVPSFLEDWIFYHI 196
           S K+L   GK+ T GN      +L LYE++L +L   V +++  V VPS+LE W+FY +
Sbjct: 302 SMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCPVEFSKEIVCVPSYLELWVFYTV 360


>AD001528-1|AAB61308.1|  366|Homo sapiens spermidine
           aminopropyltransferase protein.
          Length = 366

 Score = 54.0 bits (124), Expect = 4e-07
 Identities = 24/59 (40%), Positives = 36/59 (61%)
 Frame = +2

Query: 20  SFKILNPTGKFMTHGNGATSPNSLELYEQELHKLNPLVSYNRSKVFVPSFLEDWIFYHI 196
           S K+L   GK+ T GN      +L LYE++L +L   V +++  V VPS+LE W+FY +
Sbjct: 302 SMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCPVEFSKEIVCVPSYLELWVFYTV 360


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,982,796
Number of Sequences: 237096
Number of extensions: 1744872
Number of successful extensions: 3389
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3389
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)