Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_N23
         (479 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC018748-1|AAH18748.1|  441|Homo sapiens zinc finger and BTB dom...    30   4.8  
AF323460-1|AAL55969.1|  441|Homo sapiens bioref protein.               30   4.8  
AB046792-1|BAB13398.1|  492|Homo sapiens KIAA1572 protein protein.     30   4.8  

>BC018748-1|AAH18748.1|  441|Homo sapiens zinc finger and BTB domain
           containing 26 protein.
          Length = 441

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
 Frame = +3

Query: 33  LLYHNILHKC---YRS*ENYPPDK*LCPIFLCILCENTFYITGSL-TFYQVVVNLV*LSI 200
           L +H+   KC   +R  ENY     +  +F+C+LC  TF   G+L    +V   +     
Sbjct: 269 LQWHHQCPKCTRVFRHLENYANHLKMHKLFMCLLCGKTFTQKGNLHRHMRVHAGIKPFQC 328

Query: 201 TMC*ELPTQRC 233
            +C +  +Q+C
Sbjct: 329 KICGKTFSQKC 339


>AF323460-1|AAL55969.1|  441|Homo sapiens bioref protein.
          Length = 441

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
 Frame = +3

Query: 33  LLYHNILHKC---YRS*ENYPPDK*LCPIFLCILCENTFYITGSL-TFYQVVVNLV*LSI 200
           L +H+   KC   +R  ENY     +  +F+C+LC  TF   G+L    +V   +     
Sbjct: 269 LQWHHQCPKCTRVFRHLENYANHLKMHKLFMCLLCGKTFTQKGNLHRHMRVHAGIKPFQC 328

Query: 201 TMC*ELPTQRC 233
            +C +  +Q+C
Sbjct: 329 KICGKTFSQKC 339


>AB046792-1|BAB13398.1|  492|Homo sapiens KIAA1572 protein protein.
          Length = 492

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
 Frame = +3

Query: 33  LLYHNILHKC---YRS*ENYPPDK*LCPIFLCILCENTFYITGSL-TFYQVVVNLV*LSI 200
           L +H+   KC   +R  ENY     +  +F+C+LC  TF   G+L    +V   +     
Sbjct: 320 LQWHHQCPKCTRVFRHLENYANHLKMHKLFMCLLCGKTFTQKGNLHRHMRVHAGIKPFQC 379

Query: 201 TMC*ELPTQRC 233
            +C +  +Q+C
Sbjct: 380 KICGKTFSQKC 390


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,586,671
Number of Sequences: 237096
Number of extensions: 1526094
Number of successful extensions: 2667
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2667
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)