Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_N18
(340 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0233 + 26599068-26599466,26601214-26601829,26601871-266019... 63 6e-11
02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309 44 3e-05
11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733 42 1e-04
05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887 40 7e-04
11_08_0097 + 28330565-28330645,28330768-28330986,28331066-283311... 36 0.006
01_07_0386 + 43218686-43218745,43218972-43219190,43219307-432193... 36 0.011
12_02_0618 - 21262021-21262117,21262429-21262466,21262933-212629... 34 0.033
06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627 31 0.23
11_04_0086 + 13362788-13362937,13363887-13363970,13364233-133642... 29 0.70
09_04_0437 - 17587944-17588909 29 0.70
03_02_0646 + 10141967-10142476,10143721-10144254 29 0.70
03_05_1041 - 29884975-29885107,29885485-29885552,29885652-298858... 29 1.2
09_06_0081 + 20745627-20748144,20748211-20748308 28 2.1
06_01_0296 - 2156895-2157160,2157435-2157527,2157932-2158031,215... 28 2.1
05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717 28 2.1
01_07_0083 + 40970890-40971015,40971886-40971994,40972679-409727... 28 2.1
12_02_0378 + 18349089-18350402,18351109-18351155,18351266-18351368 27 2.8
12_02_0233 - 16023062-16023253,16023528-16023609,16023699-160238... 27 2.8
11_01_0489 + 3776563-3776692,3776995-3777073,3777532-3777840,377... 27 5.0
03_02_0146 + 5916692-5917931,5918198-5918261,5918836-5919057,591... 27 5.0
09_02_0014 - 2977053-2977296,2977719-2978098 26 6.6
07_03_0207 - 15183894-15184685,15184993-15185078,15186042-151861... 26 6.6
04_04_0048 + 22351788-22352177,22353175-22353711 26 6.6
03_01_0644 - 4719954-4720022,4720445-4720912,4721009-4721312,472... 26 6.6
03_01_0235 - 1842909-1843498,1844380-1844569 26 6.6
01_07_0036 + 40647046-40647100,40647120-40647571,40648135-406482... 26 6.6
01_01_1189 + 9454042-9455655 26 6.6
01_01_0282 - 2349336-2349583,2349719-2349786,2349880-2349950,235... 26 6.6
12_01_0744 - 6688631-6688660,6689032-6690603,6690697-6691497 26 8.7
11_06_0655 - 25923171-25923185,25923208-25923432,25923865-259243... 26 8.7
08_02_1084 - 24232968-24234779 26 8.7
08_02_1016 - 23606089-23607072 26 8.7
06_03_0345 + 19758188-19758382,19759857-19759952,19760061-197601... 26 8.7
02_02_0374 + 9538478-9540385 26 8.7
01_01_0980 + 7754841-7754971,7757048-7757330,7757435-7757640,775... 26 8.7
>05_06_0233 +
26599068-26599466,26601214-26601829,26601871-26601917,
26602101-26602268
Length = 409
Score = 62.9 bits (146), Expect = 6e-11
Identities = 25/49 (51%), Positives = 35/49 (71%)
Frame = +2
Query: 23 LYKNTIHCWATIAKTEGGAAFFKGAFSNVLRGTGGAFVLVLYDEIKKLL 169
+Y +T+ CW I K EG +F++GA SN+ R TG A +LVLYDE+KK +
Sbjct: 288 MYSSTLDCWRKIYKVEGIKSFYRGALSNMFRSTGAAAILVLYDEVKKFM 336
>02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309
Length = 382
Score = 44.0 bits (99), Expect = 3e-05
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +2
Query: 20 ILYKNTIHCWATIAKTEGGAAFFKGAFSNVLRGTGGAFVLVLYDEIKKL 166
+ YK+++ ++ I K EG + FKGA +N+LR GA VL YD+++ L
Sbjct: 323 VKYKSSMDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLSGYDQLQIL 371
>11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733
Length = 329
Score = 41.9 bits (94), Expect = 1e-04
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +2
Query: 26 YKNTIHCWATIAKTEGGAAFFKGAFSNVLRGTGGAFVLVLYDEIKK 163
YKN H I TEG F+G +N+L G GA VL YD++ +
Sbjct: 266 YKNAFHAAKQIVSTEGFFTLFRGVGANILSGMAGAGVLAGYDQLHR 311
>05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887
Length = 380
Score = 39.5 bits (88), Expect = 7e-04
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +2
Query: 20 ILYKNTIHCWATIAKTEGGAAFFKGAFSNVLRGTGGAFVLVLYDEIK 160
+ Y +++ + I EG + FKGA +N+LR GA VL YD+++
Sbjct: 321 VKYNSSLDAFKQIVAKEGAKSLFKGAGANILRAVAGAGVLAGYDKLQ 367
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 26 YKNTIHCWATIAKTEGGAAFFKGAFSNVLR 115
YK C+ K EG A ++G +NV+R
Sbjct: 124 YKGIADCFGRTIKDEGVIALWRGNTANVIR 153
>11_08_0097 +
28330565-28330645,28330768-28330986,28331066-28331144,
28331222-28331355,28331447-28331545,28331638-28331742,
28332377-28332451,28333671-28333757,28333854-28333889
Length = 304
Score = 36.3 bits (80), Expect = 0.006
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 2 TRAKSDILYKNTIHCWATIAKTEGGAAFFKGAFSNVLR-GTGGAFVLVLYDEIKKL 166
+R D Y +TI C+ K +G AF+KG N R G+ + + ++++KL
Sbjct: 242 SRMMGDSAYTSTIDCFVKTLKNDGPLAFYKGFLPNFARLGSWNVIMFLTLEQVQKL 297
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 26 YKNTIHCWATIAKTEGGAAFFKGAFSNVLRG-TGGAFVLVLYDEIK 160
Y+ + ATIA+ EG AA +KG + R G + LY+ ++
Sbjct: 54 YRGLLGTAATIAREEGAAALWKGIVPGLHRQCIYGGLRIGLYEPVR 99
>01_07_0386 +
43218686-43218745,43218972-43219190,43219307-43219391,
43219583-43219713,43219802-43219900,43219984-43220088,
43220190-43220264,43222006-43222092,43222129-43222173
Length = 301
Score = 35.5 bits (78), Expect = 0.011
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 2 TRAKSDILYKNTIHCWATIAKTEGGAAFFKGAFSNVLR 115
+R D YK+T+ C+A K +G AF+KG +N R
Sbjct: 236 SRMMGDATYKSTLDCFAKTLKNDGLPAFYKGFIANFCR 273
>12_02_0618 -
21262021-21262117,21262429-21262466,21262933-21262986,
21263274-21263438,21263523-21263759,21263857-21263918,
21264543-21264656,21264816-21264942,21266200-21266218,
21266338-21266428,21266932-21267094,21267182-21267330,
21268147-21268287,21268368-21268533,21268568-21268631,
21268729-21269084,21269759-21269977,21270328-21270433,
21270713-21270942
Length = 865
Score = 33.9 bits (74), Expect = 0.033
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 23 LYKNTIHCWATIAKTEGGAAFFKGAFSNVLR-GTGGAFVLVLYDEIKKL 166
+Y+N HC + TEG + +KG F+ R G A V+ +++++L
Sbjct: 811 VYRNGFHCGYQVVVTEGVTSLYKGGFATFARLGPQTAITFVVCEKLREL 859
>06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627
Length = 419
Score = 31.1 bits (67), Expect = 0.23
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 53 TIAKTEGGAAFFKGAFSNVLR-GTGGAFVLVLYDEIKKLL 169
+I KTEG F+G F NV+R A L +D KK L
Sbjct: 179 SIMKTEGWTGLFRGNFVNVIRVAPSKAIELFAFDTAKKFL 218
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 23 LYKNTIHCWATIAKTEGGAAFFKGAFSNVLRGTGGAFV-LVLYDEIKKLL 169
+YKN H I + EG +KG + ++ A + + Y+ KK+L
Sbjct: 362 VYKNVFHALYCIMENEGIGGLYKGLGPSCIKLMPAAGISFMCYEACKKIL 411
>11_04_0086 +
13362788-13362937,13363887-13363970,13364233-13364294,
13365146-13365507,13365928-13366142,13366236-13366292
Length = 309
Score = 29.5 bits (63), Expect = 0.70
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 26 YKNTIHCWATIAKTEGGAAFFKGAFSNVLRGTG-GAFVLVLYDEIKKL 166
YKN H IA EG A +KGA V+R +L YD+ +L
Sbjct: 158 YKNAFHALYRIAADEGVLALWKGAGPTVVRAMSLNMGMLASYDQSVEL 205
>09_04_0437 - 17587944-17588909
Length = 321
Score = 29.5 bits (63), Expect = 0.70
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +2
Query: 26 YKNTIHCWATIAKTEGGAAFFKGAFSNVLRGTGGAFVLVLY---DEIKKLL 169
Y + C ++EG A +KG V R G F +VL+ ++++KLL
Sbjct: 268 YSGALDCLIKTVRSEGAMALYKGFVPTVTR--QGPFTIVLFVTLEQVRKLL 316
>03_02_0646 + 10141967-10142476,10143721-10144254
Length = 347
Score = 29.5 bits (63), Expect = 0.70
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +2
Query: 17 DIL-YKNTIHCWATIAKTEGGAAFFKGAFSNVLR-GTGGA 130
D+L YK IHC TI EG + GA V+R GT A
Sbjct: 185 DLLRYKGPIHCARTIVTEEGLFGLWAGALPTVMRNGTNQA 224
Score = 29.5 bits (63), Expect = 0.70
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 17 DILYKNTIHCWATIAKTEGGAAFFKGAFSNVLR-GTGGAFVLVLYDEIKKL 166
DI YK +H TI EG A +KG ++R G A + + D++ L
Sbjct: 286 DIKYKGMVHAIRTIYTEEGLRALWKGLLPRLMRIPPGQAIMWAVADQVMGL 336
Score = 26.6 bits (56), Expect = 5.0
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 26 YKNTIHCWATIAKTEGGAAFFKG 94
Y+ HC T+ ++EG A +KG
Sbjct: 75 YRGIAHCGTTVVRSEGVRALWKG 97
>03_05_1041 -
29884975-29885107,29885485-29885552,29885652-29885816,
29886262-29886372,29886999-29887072,29887387-29887480,
29887750-29887849,29888075-29888151,29888856-29888935,
29889025-29889157
Length = 344
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 26 YKNTIHCWATIAKTEGGAAFFKGAFSNVLRGT 121
Y+NT H TIA++EG + G + VL T
Sbjct: 57 YRNTAHAVYTIARSEGLRGLYAGFYPAVLGST 88
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 9 PRATFSTRTPYTAGRPLPRLRVEPPSSRAPSRTC 110
P TF TP T P P V P + +P+ TC
Sbjct: 277 PAPTFHVPTPPTPATPAPPADVPPGFTVSPTTTC 310
>06_01_0296 -
2156895-2157160,2157435-2157527,2157932-2158031,
2158634-2158738,2158832-2158972,2159056-2159568
Length = 405
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +3
Query: 9 PRATFSTRTPYTAGRPLPRLRVEPPSSRAPSRTCSEVPAVRSCW 140
P S P+ GRPL R PP A + PA R W
Sbjct: 52 PHPHLSKILPFRRGRPLARSYDSPPPPAAAAAAPPPPPAWRLAW 95
>05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717
Length = 415
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 32 NTIHCWATIAKTEGGAAFFKGAFSNVLR-GTGGAFVLVLYDEIKKLL 169
+T + +I K EG F+G F NV+R A L +D K L
Sbjct: 170 STAEVFQSIMKHEGWTGLFRGNFVNVIRVAPSKAIELFAFDTANKFL 216
>01_07_0083 +
40970890-40971015,40971886-40971994,40972679-40972790,
40972944-40973100,40973609-40973761,40974143-40974292,
40974803-40974999,40975446-40975473
Length = 343
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +2
Query: 26 YKNTIHCWATIAKTEGGAAFFKGAFSNVLRGT-GGAFVLVLYDEI 157
YK H I EG +KG F ++++ GA V Y+ I
Sbjct: 288 YKGMYHALKEIVAKEGFGGLYKGLFPSLVKSAPAGAVTFVAYEYI 332
>12_02_0378 + 18349089-18350402,18351109-18351155,18351266-18351368
Length = 487
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -2
Query: 153 SSYNTNTNAPPVPLSTFEKAPLKKAAPP 70
+SY +++++ P P + PLK+ APP
Sbjct: 20 ASYTSSSSSSPSPSQPTARPPLKRKAPP 47
>12_02_0233 -
16023062-16023253,16023528-16023609,16023699-16023809,
16023890-16024141,16024227-16024580,16024893-16025548,
16025554-16026459,16026550-16026747
Length = 916
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 15 ATFSTRTPYTAGRPLPRLRVEPPSSRAPS 101
+T S+ TA P P L EPPS R PS
Sbjct: 553 STPSSSQAMTAAAPAPPLPPEPPSPRHPS 581
>11_01_0489 +
3776563-3776692,3776995-3777073,3777532-3777840,
3778828-3778898,3778975-3779213,3779306-3779383,
3779734-3780156,3780416-3780661,3780886-3780978,
3781480-3781527
Length = 571
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -1
Query: 139 QHERTAGTSEHVREGALEEGGSTLSLGNGRPAVY 38
Q R+ + H + LE+G ST + N PAVY
Sbjct: 460 QANRSTEFAHHPKLRKLEDGTSTPGIVNNNPAVY 493
>03_02_0146 +
5916692-5917931,5918198-5918261,5918836-5919057,
5919626-5919747,5920105-5920170,5920192-5920386,
5920480-5921057,5921818-5921968,5922465-5922715
Length = 962
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 144 NTNTNAPPVPLSTFEKAP 91
N NTNA P P S F AP
Sbjct: 869 NANTNASPKPTSKFHDAP 886
>09_02_0014 - 2977053-2977296,2977719-2978098
Length = 207
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 33 TPYTAGRPLPRLRVEPPSSRAPSRTCSEV 119
TPY R PR +P + AP+ CS++
Sbjct: 120 TPYPRQRTRPRSVHQPGAGNAPNHICSKL 148
>07_03_0207 -
15183894-15184685,15184993-15185078,15186042-15186144,
15186890-15186971,15187112-15187203,15187295-15187383,
15187467-15187547,15188610-15188724,15188894-15188935
Length = 493
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 78 PPSSRAPSRTCSEVPAVRS 134
PP + APS+T +VP V S
Sbjct: 311 PPDTSAPSKTSGQVPVVTS 329
>04_04_0048 + 22351788-22352177,22353175-22353711
Length = 308
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 20 ILYKNTIHCWATIAKTEGGAAFFKGAFSNVLRGTGGAFVL-VLYDEIKK 163
+LY+N+ C K EG A +KG R FV V Y+++++
Sbjct: 253 VLYRNSYDCLVKTVKHEGLTALWKGFLPTWARLGPWQFVFWVSYEKLRQ 301
>03_01_0644 -
4719954-4720022,4720445-4720912,4721009-4721312,
4722321-4722745
Length = 421
Score = 26.2 bits (55), Expect = 6.6
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +2
Query: 29 KNTIHCWATIAKTEGGAAFFKGAFSNVLR-GTGGAFVLVLYDEIKKLL 169
+N IA T+G F+KG F N+LR A YD +K L
Sbjct: 162 RNLFELIHAIATTQGLKGFWKGNFVNILRTAPFKAVNFYAYDTYRKQL 209
>03_01_0235 - 1842909-1843498,1844380-1844569
Length = 259
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 121 GTSEHVREGALEEGGSTLSLGNGRPA 44
G + + EG EG SLGNGR A
Sbjct: 67 GALQDIPEGDATEGAGAESLGNGRDA 92
>01_07_0036 +
40647046-40647100,40647120-40647571,40648135-40648257,
40648407-40648461,40648613-40648722,40649352-40649531,
40650003-40650101,40651182-40651280,40652195-40652289,
40652290-40652378,40652739-40652901,40653299-40653404,
40655647-40655829,40656059-40656286,40656373-40656486
Length = 716
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 24 STRTPYTAGRPLPRLRVEPPSSRAPSRTCSE 116
S R P + G+P+P + EP S +R +E
Sbjct: 109 SERKPSSEGKPMPAIAAEPVSCAGFARPAAE 139
>01_01_1189 + 9454042-9455655
Length = 537
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -1
Query: 148 VQYQHERTAGTSEHVREGALEEGGSTLSLGNGRPAVYGVLVENVA 14
++ + E A + A EEGG T G+G +G L++ A
Sbjct: 114 LEAEEEAAAAAAAAAAAAAEEEGGETAGSGDGGEWSFGGLIQTFA 158
>01_01_0282 -
2349336-2349583,2349719-2349786,2349880-2349950,
2350022-2350123,2350309-2350449,2350540-2350716,
2352228-2352338
Length = 305
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 11 KSDILYKNTIHCWATIAKTEGGAAFFKGAFSNVLR-GTGGAFVLVLYDEIK 160
K+ YK H +TI + EG +KG + +L G A +Y+ ++
Sbjct: 144 KTTRYYKGIFHAVSTICRDEGVKGLYKGLGATLLGVGPSIAISFTVYESLR 194
>12_01_0744 - 6688631-6688660,6689032-6690603,6690697-6691497
Length = 800
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 18 TFSTRTPYTA-GRPLPRLRVEPPSSRAPSRTCSEVPAVRS 134
T ST P +A RP+ + P P+ T S VP++ S
Sbjct: 152 TCSTMVPSSATARPVAKSTAAAPERVFPATTASSVPSITS 191
>11_06_0655 -
25923171-25923185,25923208-25923432,25923865-25924324,
25924330-25924985
Length = 451
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 18 TFSTRTPYTA-GRPLPRLRVEPPSSRAPSRTCSEVPAVRS 134
T ST P +A RP+ + P P+ T S VP++ S
Sbjct: 131 TCSTMVPSSATARPVAKSTAAAPERVFPATTASSVPSITS 170
>08_02_1084 - 24232968-24234779
Length = 603
Score = 25.8 bits (54), Expect = 8.7
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -1
Query: 145 QYQHERTAGTSEHVREGALEEGGSTLSLGNGRPAVYG 35
Q+Q ++ G H R G GG + +GNG PAV G
Sbjct: 142 QHQIQQGGGDGFH-RPGG-NYGGGPIVVGNGGPAVVG 176
>08_02_1016 - 23606089-23607072
Length = 327
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 26 YKNTIHCWATIAKTEGGAAFFKGAFSNVLRGTGGAFVLVLYDEIKKL 166
Y I C ++EG A +KG V R G F +VL+ ++++
Sbjct: 274 YSGAIDCALKTVRSEGVMALYKGFIPTVSR--QGPFTVVLFVTLEQV 318
>06_03_0345 +
19758188-19758382,19759857-19759952,19760061-19760144,
19760504-19760573,19760934-19761838,19763661-19764287
Length = 658
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 45 AGRPLPRLRVEPPSSRAPSRTCSEVPAV 128
A PLP V P+S PSR S P +
Sbjct: 394 AAAPLPPAAVAAPASTGPSRARSAAPTL 421
>02_02_0374 + 9538478-9540385
Length = 635
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 141 YCTMKSRSSSKSNVRIVTIINSIVI-PYHLNHSPEIMY 251
+C + S K + I+ +I S V+ PYHL+H + Y
Sbjct: 430 WCRPWNPSDYKVSPDIIMLITSSVLHPYHLDHIVSLTY 467
>01_01_0980 +
7754841-7754971,7757048-7757330,7757435-7757640,
7757687-7757879,7758912-7759104,7759555-7759589
Length = 346
Score = 25.8 bits (54), Expect = 8.7
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +3
Query: 72 VEPPSSRAPSRTCSEV-PAVRSCWYCTM--KSRSSSKSNVRIV--TIINSIVIPYHLNHS 236
+ PPS R +TC++V A S +CT K+RS + R +++ +P +HS
Sbjct: 152 LRPPSGRR-CKTCADVLVAAESALFCTFQCKARSGEVAGHRWAQDLLLDDFAVPCESHHS 210
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,240,871
Number of Sequences: 37544
Number of extensions: 155236
Number of successful extensions: 644
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 470052804
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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