Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_N16
(515 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y08223-1|CAA69400.1| 501|Homo sapiens Mesenchyme Fork Head-1 pr... 37 0.048
BC113439-1|AAI13440.1| 501|Homo sapiens forkhead box C2 (MFH-1,... 37 0.048
BC113437-1|AAI13438.1| 501|Homo sapiens forkhead box C2 (MFH-1,... 37 0.048
BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein. 31 1.8
BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear r... 31 1.8
BC080591-1|AAH80591.1| 189|Homo sapiens HNRPA3 protein protein. 31 1.8
AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear r... 31 1.8
AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein. 31 1.8
X16663-1|CAA34651.1| 486|Homo sapiens protein ( Human HS1 gene ... 30 4.2
CR456794-1|CAG33075.1| 486|Homo sapiens HCLS1 protein. 30 4.2
BT006824-1|AAP35470.1| 486|Homo sapiens hematopoietic cell-spec... 30 4.2
BC016758-1|AAH16758.1| 486|Homo sapiens hematopoietic cell-spec... 30 4.2
AJ271747-1|CAC01407.1| 591|Homo sapiens double stranded RNA bin... 30 4.2
AJ271741-4|CAC01124.1| 441|Homo sapiens ILF3 protein. 30 4.2
AF202445-2|AAF82685.1| 709|Homo sapiens dsRNA binding protein N... 30 4.2
AF167570-1|AAD51099.1| 894|Homo sapiens nuclear factor associat... 30 4.2
AF320247-1|AAK07425.1| 894|Homo sapiens 110 kDa NFAR protein pr... 29 7.3
>Y08223-1|CAA69400.1| 501|Homo sapiens Mesenchyme Fork Head-1
protein.
Length = 501
Score = 36.7 bits (81), Expect = 0.048
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 183 SDKYGVSNSNYQFSQSGGIYGGEVNYVTKPPSYANEGPYSYDISK 317
S + G+ NS SQ G ++ Y + PP Y + PYSYD +K
Sbjct: 456 SHRLGIENSTLGESQVSGNASCQLPYRSTPPLYRHAAPYSYDCTK 500
>BC113439-1|AAI13440.1| 501|Homo sapiens forkhead box C2 (MFH-1,
mesenchyme forkhead 1) protein.
Length = 501
Score = 36.7 bits (81), Expect = 0.048
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 183 SDKYGVSNSNYQFSQSGGIYGGEVNYVTKPPSYANEGPYSYDISK 317
S + G+ NS SQ G ++ Y + PP Y + PYSYD +K
Sbjct: 456 SHRLGIENSTLGESQVSGNASCQLPYRSTPPLYRHAAPYSYDCTK 500
>BC113437-1|AAI13438.1| 501|Homo sapiens forkhead box C2 (MFH-1,
mesenchyme forkhead 1) protein.
Length = 501
Score = 36.7 bits (81), Expect = 0.048
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 183 SDKYGVSNSNYQFSQSGGIYGGEVNYVTKPPSYANEGPYSYDISK 317
S + G+ NS SQ G ++ Y + PP Y + PYSYD +K
Sbjct: 456 SHRLGIENSTLGESQVSGNASCQLPYRSTPPLYRHAAPYSYDCTK 500
>BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein.
Length = 378
Score = 31.5 bits (68), Expect = 1.8
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 7/54 (12%)
Frame = +3
Query: 153 GYGGNGRPGFSDKYGVSNSNYQ-FSQSGGIYGGEVNYVTK------PPSYANEG 293
GYGG G G YG + Y F GG YGG Y ++ P Y N+G
Sbjct: 248 GYGGGGG-GSRGSYGGGDGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPGYGNQG 300
Score = 29.5 bits (63), Expect = 7.3
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +3
Query: 153 GYGGN--GRPGFSDKYGVSNSNYQFSQSGGIYGGEVNY 260
G GGN G PG+S + G + GG YGG Y
Sbjct: 272 GDGGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGY 309
>BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear
ribonucleoprotein A3 protein.
Length = 378
Score = 31.5 bits (68), Expect = 1.8
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 7/54 (12%)
Frame = +3
Query: 153 GYGGNGRPGFSDKYGVSNSNYQ-FSQSGGIYGGEVNYVTK------PPSYANEG 293
GYGG G G YG + Y F GG YGG Y ++ P Y N+G
Sbjct: 248 GYGGGGG-GSRGSYGGGDGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPGYGNQG 300
Score = 29.5 bits (63), Expect = 7.3
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +3
Query: 153 GYGGN--GRPGFSDKYGVSNSNYQFSQSGGIYGGEVNY 260
G GGN G PG+S + G + GG YGG Y
Sbjct: 272 GDGGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGY 309
>BC080591-1|AAH80591.1| 189|Homo sapiens HNRPA3 protein protein.
Length = 189
Score = 31.5 bits (68), Expect = 1.8
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 7/54 (12%)
Frame = +3
Query: 153 GYGGNGRPGFSDKYGVSNSNYQ-FSQSGGIYGGEVNYVTK------PPSYANEG 293
GYGG G G YG + Y F GG YGG Y ++ P Y N+G
Sbjct: 59 GYGGGGG-GSRGSYGGGDGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPGYGNQG 111
Score = 29.5 bits (63), Expect = 7.3
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +3
Query: 153 GYGGN--GRPGFSDKYGVSNSNYQFSQSGGIYGGEVNY 260
G GGN G PG+S + G + GG YGG Y
Sbjct: 83 GDGGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGY 120
>AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear
ribonucleoprotein A3 protein.
Length = 378
Score = 31.5 bits (68), Expect = 1.8
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 7/54 (12%)
Frame = +3
Query: 153 GYGGNGRPGFSDKYGVSNSNYQ-FSQSGGIYGGEVNYVTK------PPSYANEG 293
GYGG G G YG + Y F GG YGG Y ++ P Y N+G
Sbjct: 248 GYGGGGG-GSRGSYGGGDGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPGYGNQG 300
Score = 29.5 bits (63), Expect = 7.3
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +3
Query: 153 GYGGN--GRPGFSDKYGVSNSNYQFSQSGGIYGGEVNY 260
G GGN G PG+S + G + GG YGG Y
Sbjct: 272 GDGGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGY 309
>AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein.
Length = 378
Score = 31.5 bits (68), Expect = 1.8
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 7/54 (12%)
Frame = +3
Query: 153 GYGGNGRPGFSDKYGVSNSNYQ-FSQSGGIYGGEVNYVTK------PPSYANEG 293
GYGG G G YG + Y F GG YGG Y ++ P Y N+G
Sbjct: 248 GYGGGGG-GSRGSYGGGDGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPGYGNQG 300
Score = 29.5 bits (63), Expect = 7.3
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +3
Query: 153 GYGGN--GRPGFSDKYGVSNSNYQFSQSGGIYGGEVNY 260
G GGN G PG+S + G + GG YGG Y
Sbjct: 272 GDGGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGY 309
>X16663-1|CAA34651.1| 486|Homo sapiens protein ( Human HS1 gene for
heamatopoietic lineage cell specific protein. ).
Length = 486
Score = 30.3 bits (65), Expect = 4.2
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +3
Query: 177 GFSDKYGVSNSNYQFSQSGGIYGGEVNYVTKPPSYANEGPYSYDISKPNYNK 332
GF KYGV S G Y GEV T Y+ Y + K ++K
Sbjct: 119 GFGGKYGVERDRADKSAVGFDYKGEVEKHTSQKDYSRGFGGRYGVEKDKWDK 170
>CR456794-1|CAG33075.1| 486|Homo sapiens HCLS1 protein.
Length = 486
Score = 30.3 bits (65), Expect = 4.2
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +3
Query: 177 GFSDKYGVSNSNYQFSQSGGIYGGEVNYVTKPPSYANEGPYSYDISKPNYNK 332
GF KYGV S G Y GEV T Y+ Y + K ++K
Sbjct: 119 GFGGKYGVERDRADKSAVGFDYKGEVEKHTSQKDYSRGFGGRYGVEKDKWDK 170
>BT006824-1|AAP35470.1| 486|Homo sapiens hematopoietic
cell-specific Lyn substrate 1 protein.
Length = 486
Score = 30.3 bits (65), Expect = 4.2
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +3
Query: 177 GFSDKYGVSNSNYQFSQSGGIYGGEVNYVTKPPSYANEGPYSYDISKPNYNK 332
GF KYGV S G Y GEV T Y+ Y + K ++K
Sbjct: 119 GFGGKYGVERDRADKSAVGFDYKGEVEKHTSQKDYSRGFGGRYGVEKDKWDK 170
>BC016758-1|AAH16758.1| 486|Homo sapiens hematopoietic
cell-specific Lyn substrate 1 protein.
Length = 486
Score = 30.3 bits (65), Expect = 4.2
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +3
Query: 177 GFSDKYGVSNSNYQFSQSGGIYGGEVNYVTKPPSYANEGPYSYDISKPNYNK 332
GF KYGV S G Y GEV T Y+ Y + K ++K
Sbjct: 119 GFGGKYGVERDRADKSAVGFDYKGEVEKHTSQKDYSRGFGGRYGVEKDKWDK 170
>AJ271747-1|CAC01407.1| 591|Homo sapiens double stranded RNA
binding nuclear protein, ILF3 protein.
Length = 591
Score = 30.3 bits (65), Expect = 4.2
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +3
Query: 156 YGGNGRPGFSDKYGVSNSNYQFSQSGGIYGGE---VNYVTKPPSYANEGPYSYDISKPNY 326
Y G+G + YG ++Y GG GG +Y K Y ++ Y+ S NY
Sbjct: 506 YSGSGGRSGGNSYGSGGASYNPGSHGGYGGGSGGGSSYQGKQGGY-SQSNYNSPGSGQNY 564
Query: 327 NKVPSISQSAK 359
+ PS QS++
Sbjct: 565 SGPPSSYQSSQ 575
>AJ271741-4|CAC01124.1| 441|Homo sapiens ILF3 protein.
Length = 441
Score = 30.3 bits (65), Expect = 4.2
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +3
Query: 156 YGGNGRPGFSDKYGVSNSNYQFSQSGGIYGGE---VNYVTKPPSYANEGPYSYDISKPNY 326
Y G+G + YG ++Y GG GG +Y K Y ++ Y+ S NY
Sbjct: 356 YSGSGGRSGGNSYGSGGASYNPGSHGGYGGGSGGGSSYQGKQGGY-SQSNYNSPGSGQNY 414
Query: 327 NKVPSISQSAK 359
+ PS QS++
Sbjct: 415 SGPPSSYQSSQ 425
>AF202445-2|AAF82685.1| 709|Homo sapiens dsRNA binding protein
NFAR-2/MPP4 protein.
Length = 709
Score = 30.3 bits (65), Expect = 4.2
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +3
Query: 156 YGGNGRPGFSDKYGVSNSNYQFSQSGGIYGGE---VNYVTKPPSYANEGPYSYDISKPNY 326
Y G+G + YG ++Y GG GG +Y K Y ++ Y+ S NY
Sbjct: 624 YSGSGGRSGGNSYGSGGASYNPGSHGGYGGGSGGGSSYQGKQGGY-SQSNYNSPGSGQNY 682
Query: 327 NKVPSISQSAK 359
+ PS QS++
Sbjct: 683 SGPPSSYQSSQ 693
>AF167570-1|AAD51099.1| 894|Homo sapiens nuclear factor associated
with dsRNA NFAR-2 protein.
Length = 894
Score = 30.3 bits (65), Expect = 4.2
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +3
Query: 156 YGGNGRPGFSDKYGVSNSNYQFSQSGGIYGGE---VNYVTKPPSYANEGPYSYDISKPNY 326
Y G+G + YG ++Y GG GG +Y K Y ++ Y+ S NY
Sbjct: 809 YSGSGGRSGGNSYGSGGASYNPGSHGGYGGGSGGGSSYQGKQGGY-SQSNYNSPGSGQNY 867
Query: 327 NKVPSISQSAK 359
+ PS QS++
Sbjct: 868 SGPPSSYQSSQ 878
>AF320247-1|AAK07425.1| 894|Homo sapiens 110 kDa NFAR protein
protein.
Length = 894
Score = 29.5 bits (63), Expect = 7.3
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +3
Query: 159 GGNGRPGFSDKYGVSNSNYQFSQSGGIYGGE---VNYVTKPPSYANEGPYSYDISKPNYN 329
G GR G + YG ++Y GG GG +Y K Y ++ Y+ S NY+
Sbjct: 811 GSEGRSG-GNSYGSGGASYNPGSHGGYGGGSGGGSSYQGKQGGY-SQSNYNSPGSGQNYS 868
Query: 330 KVPSISQSAK 359
PS QS++
Sbjct: 869 GPPSSYQSSQ 878
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,525,507
Number of Sequences: 237096
Number of extensions: 1469271
Number of successful extensions: 4072
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4067
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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