Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_N16
(515 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 25 0.46
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 3.3
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 3.3
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 3.3
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 3.3
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 3.3
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 3.3
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 3.3
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 21 5.7
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 5.7
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 5.7
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 21 7.5
EF032397-1|ABM97933.1| 200|Apis mellifera arginine kinase protein. 21 10.0
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 21 10.0
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 10.0
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 10.0
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 10.0
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 10.0
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 21 10.0
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 21 10.0
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 21 10.0
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 21 10.0
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 10.0
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 10.0
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 10.0
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 10.0
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 10.0
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 10.0
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 10.0
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 10.0
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 10.0
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 10.0
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 10.0
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 10.0
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 21 10.0
AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein. 21 10.0
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 21 10.0
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 25.0 bits (52), Expect = 0.46
Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 5/47 (10%)
Frame = +3
Query: 294 PYSYDISKPNYN-----KVPSISQSAKPDSIXXXXXXXXXXXSDGDK 419
P Y IS P Y K PS++ +A+P S +D +K
Sbjct: 328 PIVYGISHPKYRAALFAKFPSLACAAEPSSDAVSTTSGTTTVTDNEK 374
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 26 RRYQTYRQTSSFNSD*RTSQ 85
R YQ YR+TS S RT +
Sbjct: 54 REYQKYRETSKERSRDRTER 73
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 26 RRYQTYRQTSSFNSD*RTSQ 85
R YQ YR+TS S RT +
Sbjct: 54 REYQKYRETSKERSRDRTER 73
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 26 RRYQTYRQTSSFNSD*RTSQ 85
R YQ YR+TS S RT +
Sbjct: 54 REYQKYRETSKERSRDRTER 73
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 26 RRYQTYRQTSSFNSD*RTSQ 85
R YQ YR+TS S RT +
Sbjct: 54 REYQKYRETSKERSRDRTER 73
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 26 RRYQTYRQTSSFNSD*RTSQ 85
R YQ YR+TS S RT +
Sbjct: 54 REYQKYRETSKERSRDRTER 73
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 26 RRYQTYRQTSSFNSD*RTSQ 85
R YQ YR+TS S RT +
Sbjct: 54 REYQKYRETSKERSRDRTER 73
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 26 RRYQTYRQTSSFNSD*RTSQ 85
R YQ YR+TS S RT +
Sbjct: 54 REYQKYRETSKERSRDRTER 73
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 292 DHTVTIFLNQTTTKYHLFLSQ 354
D+T+T++LNQ L SQ
Sbjct: 81 DYTITMYLNQYWKDERLAFSQ 101
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 26 RRYQTYRQTSSFNSD*RTSQ 85
R Y+ YR+TS S RT +
Sbjct: 54 REYRKYRETSKERSQDRTER 73
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 26 RRYQTYRQTSSFNSD*RTSQ 85
R Y+ YR+TS S RT +
Sbjct: 54 REYRKYRETSKERSQDRTER 73
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +3
Query: 156 YGGNGRPGFSDKYGVSNSNYQ 218
Y N +P +YG +N YQ
Sbjct: 277 YYVNTKPFMKSEYGANNVQYQ 297
>EF032397-1|ABM97933.1| 200|Apis mellifera arginine kinase protein.
Length = 200
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 97 PLNPCYTLQDHKKFLQK 147
P NPC T +K+ +K
Sbjct: 118 PFNPCLTEAQYKEMEEK 134
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 20.6 bits (41), Expect = 10.0
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +3
Query: 237 IYGGEVNYVTKPPSYANEGPYSYDISKPNYNKVPS 341
I GE +Y PS ++ ++ YN VPS
Sbjct: 54 ILSGEYDYKNNYPSDIDQWHDKIFVTMLRYNGVPS 88
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 10.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 26 RRYQTYRQTSSFNSD*RTSQ 85
R Y+ YR+TS S RT +
Sbjct: 54 REYRKYRETSKERSRNRTER 73
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 10.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 26 RRYQTYRQTSSFNSD*RTSQ 85
R Y+ YR+TS S RT +
Sbjct: 54 REYRKYRETSKERSRNRTER 73
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 20.6 bits (41), Expect = 10.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 26 RRYQTYRQTSSFNSD*RTSQ 85
R Y+ YR+TS S RT +
Sbjct: 54 REYRKYRETSKERSRDRTER 73
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 10.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 26 RRYQTYRQTSSFNSD*RTSQ 85
R Y+ YR+TS S RT +
Sbjct: 53 REYRKYRETSKERSRDRTER 72
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 10.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 26 RRYQTYRQTSSFNSD*RTSQ 85
R Y+ YR+TS S RT +
Sbjct: 54 REYRKYRETSKERSRDRTER 73
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 10.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 26 RRYQTYRQTSSFNSD*RTSQ 85
R Y+ YR+TS S RT +
Sbjct: 54 REYRKYRETSKERSRDRTER 73
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 10.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 26 RRYQTYRQTSSFNSD*RTSQ 85
R Y+ YR+TS S RT +
Sbjct: 54 REYRKYRETSKERSRDRTER 73
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 10.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 26 RRYQTYRQTSSFNSD*RTSQ 85
R Y+ YR+TS S RT +
Sbjct: 54 REYRKYRETSKERSRDRTER 73
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 10.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 26 RRYQTYRQTSSFNSD*RTSQ 85
R Y+ YR+TS S RT +
Sbjct: 54 REYRKYRETSKERSRNRTER 73
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 10.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 26 RRYQTYRQTSSFNSD*RTSQ 85
R Y+ YR+TS S RT +
Sbjct: 54 REYRKYRETSKERSRNRTER 73
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 10.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 26 RRYQTYRQTSSFNSD*RTSQ 85
R Y+ YR+TS S RT +
Sbjct: 54 REYRKYRETSKERSRNRTER 73
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 10.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 26 RRYQTYRQTSSFNSD*RTSQ 85
R Y+ YR+TS S RT +
Sbjct: 54 REYRKYRETSKERSRNRTER 73
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 10.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 26 RRYQTYRQTSSFNSD*RTSQ 85
R Y+ YR+TS S RT +
Sbjct: 54 REYRKYRETSKERSRNRTER 73
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 10.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 26 RRYQTYRQTSSFNSD*RTSQ 85
R Y+ YR+TS S RT +
Sbjct: 54 REYRKYRETSKERSRNRTER 73
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 10.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 26 RRYQTYRQTSSFNSD*RTSQ 85
R Y+ YR+TS S RT +
Sbjct: 54 REYRKYRETSKERSRNRTER 73
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 10.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 26 RRYQTYRQTSSFNSD*RTSQ 85
R Y+ YR+TS S RT +
Sbjct: 54 REYRKYRETSKERSRNRTER 73
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.6 bits (41), Expect = 10.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 26 RRYQTYRQTSSFNSD*RTSQ 85
R Y+ YR+TS S RT +
Sbjct: 276 REYRKYRETSKGRSRDRTER 295
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 10.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 26 RRYQTYRQTSSFNSD*RTSQ 85
R Y+ YR+TS S RT +
Sbjct: 287 REYRKYRETSKGRSRDRTER 306
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.6 bits (41), Expect = 10.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 26 RRYQTYRQTSSFNSD*RTSQ 85
R Y+ YR+TS S RT +
Sbjct: 287 REYRKYRETSKERSRNRTER 306
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.6 bits (41), Expect = 10.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 26 RRYQTYRQTSSFNSD*RTSQ 85
R Y+ YR+TS S RT +
Sbjct: 287 REYRKYRETSKERSRNRTER 306
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 20.6 bits (41), Expect = 10.0
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +3
Query: 237 IYGGEVNYVTKPPSYANEGPYSYDISKPNYNKVPS 341
I GE +Y PS ++ ++ YN VPS
Sbjct: 54 ILSGEYDYKNNYPSDIDQWHDKIFVTMLRYNGVPS 88
>AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein.
Length = 355
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 97 PLNPCYTLQDHKKFLQK 147
P NPC T +K+ +K
Sbjct: 134 PFNPCLTEAQYKEMEEK 150
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 20.6 bits (41), Expect = 10.0
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +3
Query: 237 IYGGEVNYVTKPPSYANEGPYSYDISKPNYNKVPS 341
I GE +Y PS ++ ++ YN VPS
Sbjct: 54 ILSGEYDYKNNYPSDIDQWHDKIFVTMLRYNGVPS 88
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,987
Number of Sequences: 438
Number of extensions: 3234
Number of successful extensions: 37
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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