Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_N15
(641 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 337 9e-94
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 336 1e-93
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 336 1e-93
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 142 5e-35
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 139 3e-34
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 95 6e-21
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 42 8e-05
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 34 0.020
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 33 0.035
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 30 0.25
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.43
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 29 0.43
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 29 0.57
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 28 1.3
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 28 1.3
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 27 1.7
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 2.3
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 26 4.0
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 26 5.3
SPAC19G12.08 |||fatty acid hydroxylase |Schizosaccharomyces pomb... 26 5.3
SPAC6F6.09 |||NuA4 histone acetyltransferase complex subunit |Sc... 25 7.0
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 25 7.0
SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyce... 25 9.3
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 25 9.3
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 25 9.3
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 25 9.3
SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|c... 25 9.3
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 25 9.3
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 337 bits (828), Expect = 9e-94
Identities = 155/210 (73%), Positives = 182/210 (86%)
Frame = +1
Query: 10 KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL 189
KY VT+IDAPGHRDFIKNMITGTSQADCAVLI+ GTGEFEAGISK+GQTREHALLA+TL
Sbjct: 84 KYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKDGQTREHALLAYTL 143
Query: 190 GVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE 369
GVKQLIV VNKMD+T +S++RFEEI KE S++IKK+G+NP V FVP+SG+ GDNM+E
Sbjct: 144 GVKQLIVAVNKMDTTG--WSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMIE 201
Query: 370 PSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPXARPTDKALRLPLQDVYQIGGIGTVP 549
P+T MPW++GW E K G +GK L+EA+D+I P ARPTDK LRLPLQDVY+IGGIGTVP
Sbjct: 202 PTTNMPWYQGWQKETKAGVVKGKTLLEAIDSIEPPARPTDKPLRLPLQDVYKIGGIGTVP 261
Query: 550 VGRVETGILKPGTVVVFAPGNITTEVKSVE 639
VGRVETG++KPG +V FAP +TTEVKSVE
Sbjct: 262 VGRVETGVIKPGMIVTFAPAGVTTEVKSVE 291
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 336 bits (827), Expect = 1e-93
Identities = 154/210 (73%), Positives = 182/210 (86%)
Frame = +1
Query: 10 KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL 189
KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQTREHALLA+TL
Sbjct: 84 KYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTREHALLAYTL 143
Query: 190 GVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE 369
GVKQLIV VNKMD+T +S++RFEEI KE S++IKK+G+NP V FVP+SG+ GDNM+E
Sbjct: 144 GVKQLIVAVNKMDTTG--WSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMIE 201
Query: 370 PSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPXARPTDKALRLPLQDVYQIGGIGTVP 549
P+T MPW++GW E K G +GK L+EA+D+I P ARPTDK LRLPLQDVY+IGGIGTVP
Sbjct: 202 PTTNMPWYQGWQKETKAGVVKGKTLLEAIDSIEPPARPTDKPLRLPLQDVYKIGGIGTVP 261
Query: 550 VGRVETGILKPGTVVVFAPGNITTEVKSVE 639
VGRVETG++KPG +V FAP +TTEVKSVE
Sbjct: 262 VGRVETGVIKPGMIVTFAPAGVTTEVKSVE 291
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 336 bits (827), Expect = 1e-93
Identities = 154/210 (73%), Positives = 182/210 (86%)
Frame = +1
Query: 10 KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL 189
KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQTREHALLA+TL
Sbjct: 84 KYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTREHALLAYTL 143
Query: 190 GVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE 369
GVKQLIV VNKMD+T +S++RFEEI KE S++IKK+G+NP V FVP+SG+ GDNM+E
Sbjct: 144 GVKQLIVAVNKMDTTG--WSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMIE 201
Query: 370 PSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPXARPTDKALRLPLQDVYQIGGIGTVP 549
P+T MPW++GW E K G +GK L+EA+D+I P ARPTDK LRLPLQDVY+IGGIGTVP
Sbjct: 202 PTTNMPWYQGWQKETKAGVVKGKTLLEAIDSIEPPARPTDKPLRLPLQDVYKIGGIGTVP 261
Query: 550 VGRVETGILKPGTVVVFAPGNITTEVKSVE 639
VGRVETG++KPG +V FAP +TTEVKSVE
Sbjct: 262 VGRVETGVIKPGMIVTFAPAGVTTEVKSVE 291
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 142 bits (343), Expect = 5e-35
Identities = 75/209 (35%), Positives = 124/209 (59%), Gaps = 4/209 (1%)
Frame = +1
Query: 22 TIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ 201
+++DAPGH+ ++ NMI G SQAD VL+++A GEFEAG + GQTREHA+LA T G+
Sbjct: 319 SLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGGQTREHAVLARTQGINH 378
Query: 202 LIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKI-GYNPAA-VAFVPISGWHGDNMLE-- 369
L+V +NKMD +SE R++E ++S +++++ GYN V ++P+S + G N+ +
Sbjct: 379 LVVVINKMDEPSVQWSEERYKECVDKLSMFLRRVAGYNSKTDVKYMPVSAYTGQNVKDRV 438
Query: 370 PSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPXARPTDKALRLPLQDVYQIGGIGTVP 549
S+ PW+ +G L+E LD++ R + +P+ Y+ +GT+
Sbjct: 439 DSSVCPWY------------QGPSLLEYLDSMTHLERKVNAPFIMPIASKYK--DLGTIL 484
Query: 550 VGRVETGILKPGTVVVFAPGNITTEVKSV 636
G++E G +K + V+ P N T EV ++
Sbjct: 485 EGKIEAGSIKKNSNVLVMPINQTLEVTAI 513
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 139 bits (337), Expect = 3e-34
Identities = 86/205 (41%), Positives = 114/205 (55%), Gaps = 3/205 (1%)
Frame = +1
Query: 31 DAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 210
DAPGHRDFI MI G S AD AVL+V + FE G +NGQTREHA L LG+ +++V
Sbjct: 261 DAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENGQTREHAYLLRALGISEIVV 320
Query: 211 GVNKMDSTEPPYSESRFEEIKKEVSSY-IKKIGYNPAAVAFVPISGWHGDNML--EPSTK 381
VNK+D +SE RF+EIK VS + IK +G+ + V FVPIS G N++ + S
Sbjct: 321 SVNKLDLMS--WSEDRFQEIKNIVSDFLIKMVGFKTSNVHFVPISAISGTNLIQKDSSDL 378
Query: 382 MPWFKGWLVERKEGKAEGKCLIEALDAILPXARPTDKALRLPLQDVYQIGGIGTVPVGRV 561
W+K G L+ ALD ++P +P K LRL + DVY+ TV GRV
Sbjct: 379 YKWYK------------GPTLLSALDQLVPPEKPYRKPLRLSIDDVYRSPRSVTV-TGRV 425
Query: 562 ETGILKPGTVVVFAPGNITTEVKSV 636
E G ++ V+ VK+V
Sbjct: 426 EAGNVQVNQVLYDVSSQEDAYVKNV 450
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 95.5 bits (227), Expect = 6e-21
Identities = 72/208 (34%), Positives = 107/208 (51%), Gaps = 4/208 (1%)
Frame = +1
Query: 28 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 207
+D PGH D+IKNMITG + D A+++V+A G+ QTREH LLA +GVKQ++
Sbjct: 121 VDCPGHADYIKNMITGAATMDGAIIVVSATDGQMP-------QTREHLLLARQVGVKQIV 173
Query: 208 VGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM-LEPSTKM 384
V +NK+D EP E E+++ +S Y G+ GDN + + +
Sbjct: 174 VYINKVDMVEPDMIELVEMEMRELLSEY-----------------GFDGDNTPIVSGSAL 216
Query: 385 PWFKGWLVERKEGKAEGKCLIEALDAILPX-ARPTDKALRLPLQDVYQIGGIGTVPVGRV 561
+G E + G L+EA+D+ + R TD + ++DV+ I G GTV GRV
Sbjct: 217 CALEG--REPEIGLNSITKLMEAVDSYITLPERKTDVPFLMAIEDVFSISGRGTVVTGRV 274
Query: 562 ETGILKPGT--VVVFAPGNITTEVKSVE 639
E G LK G +V ++ T V +E
Sbjct: 275 ERGTLKKGAEIEIVGYGSHLKTTVTGIE 302
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 41.9 bits (94), Expect = 8e-05
Identities = 23/93 (24%), Positives = 42/93 (45%)
Frame = +1
Query: 16 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 195
+V+ +D PGH + M+ G + D A+L++A QT EH + +
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162
Query: 196 KQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYI 294
K +I+ NK+D +E ++ I K + +
Sbjct: 163 KHIIILQNKVDLIRESAAEEHYQSILKFIKGTV 195
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 33.9 bits (74), Expect = 0.020
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 4 RGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 123
+G ++T +D PGH F G + AD VL+VA G
Sbjct: 217 KGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDG 256
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 33.1 bits (72), Expect = 0.035
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +1
Query: 13 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 168
Y + IID PGH DF + D AVL++ A +G I+ + Q R +
Sbjct: 145 YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 30.3 bits (65), Expect = 0.25
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 13 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 123
Y + +ID+PGH DF + + + D A ++V A G
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.5 bits (63), Expect = 0.43
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 25 IIDAPGHRDFIKNMITGTSQADCAVLIV 108
IID PGH F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 29.5 bits (63), Expect = 0.43
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 13 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 123
Y + +ID PGH DF ++ + + +L+V A G
Sbjct: 124 YLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 29.1 bits (62), Expect = 0.57
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +1
Query: 19 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 198
+ +ID PGH DF + + D AV I+ + AG+ QT+ A G+
Sbjct: 95 INLIDTPGHADFTFEVERSVAVLDGAVAII-----DGSAGV--EAQTKVVWKQATKRGIP 147
Query: 199 QLIVGVNKMD 228
++I VNKMD
Sbjct: 148 KVIF-VNKMD 156
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 27.9 bits (59), Expect = 1.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 13 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 108
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 27.9 bits (59), Expect = 1.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 13 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 108
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 27.5 bits (58), Expect = 1.7
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = -1
Query: 626 TSVVMLPGAKTTTVPGFRIPVSTLPTGTVPIPPIWYTS 513
+SVV+ +T TV + VST TGTV +P YTS
Sbjct: 86 SSVVLYSAKETVTVSSYWSLVSTSVTGTVYVP---YTS 120
Score = 26.6 bits (56), Expect = 3.0
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 230 PLSHHTVSLDLRKSRRKSLPTSRKLVTIRLPSLS 331
P S +++ +K +LPTS K++T PS+S
Sbjct: 402 PTSFPSLTSSTKKIPSTTLPTSSKMITTTTPSVS 435
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 27.1 bits (57), Expect = 2.3
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 4 RGKYYV-TIIDAPGHRDFIKNMITGTSQADCAVLIV 108
+GK + ID PGH DF+ + + +D VL+V
Sbjct: 205 KGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1588
Score = 26.2 bits (55), Expect = 4.0
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = -3
Query: 522 VYVLQGKTESLVSGASXRKDGVEGLNKAFTFSLSFFTLNQPSLEPWHFGGRLQHVI 355
V++ Q + S++ G + + V LNKAF+ S + F + S P HF ++ +V+
Sbjct: 1522 VWLSQAYSPSVLQGTT---ENVAFLNKAFSASANLFDVLPVSNTPSHF-SKMDYVL 1573
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 25.8 bits (54), Expect = 5.3
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +2
Query: 275 RKSLPTSRKLVTIRLPSLSYPFLAGTEITCWSRPPKCHGSRDGWLSVKKE 424
R+S S + + LPS PF++ + + ++P G + KKE
Sbjct: 639 RRSFKPSEEAAKLSLPSRKNPFVSDSAVLKVNKPEMKEGQKKAEARKKKE 688
>SPAC19G12.08 |||fatty acid hydroxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 347
Score = 25.8 bits (54), Expect = 5.3
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +1
Query: 223 MDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWF 393
+D +P + F IKK+V Y+ ++ + P + G N LEP TK PW+
Sbjct: 107 LDLKKPLLPQILFGNIKKDV--YLDQV-HRPRHYRGSGSAPLFG-NFLEPLTKTPWY 159
>SPAC6F6.09 |||NuA4 histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 138
Score = 25.4 bits (53), Expect = 7.0
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 232 TEPPYSESRFEEIKKEVSSYIKK 300
+EPP + S +E+ KKE+ I+K
Sbjct: 9 SEPPVNVSYYEQCKKELHEMIEK 31
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein
3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1385
Score = 25.4 bits (53), Expect = 7.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 129 EFTSTSGDNKHGAVSLRRSSDHVLDE 52
+F S+ + K+G + SSD VLDE
Sbjct: 1234 DFVSSKRNGKNGGSFIEESSDTVLDE 1259
>SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1112
Score = 25.0 bits (52), Expect = 9.3
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +1
Query: 400 WLVERKEGKAEGKCLIEALDAILPXARPTDKALRLP 507
+L+ + K G E++DA+LP + +L +P
Sbjct: 628 YLLSSENAKDTGDIKSESIDAVLPTLETSSPSLSIP 663
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 25.0 bits (52), Expect = 9.3
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = -3
Query: 618 SDVTRGKNDNSTRL*DTSFNSTHGYCSNTADLVYVLQGKTESLVSGASXRKDGVEGLN 445
+D T +ND + TS +S+ S+T+D + + +SLV+ K E N
Sbjct: 354 NDTTESENDTLSESSTTSISSSPSENSDTSDDLTKVDSPNKSLVNDNVSAKHDKESEN 411
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 25.0 bits (52), Expect = 9.3
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Frame = -3
Query: 639 FHGLDFSSDVTRGKNDNSTRL*DTSFNSTHGYCSNTADLVYVLQG-----KTESLVSGAS 475
+H D+ +++ N ++T++ ++N + A L Q +T L S +S
Sbjct: 262 YHLFDYYNEIASSPNPSTTKI---TYNPPKLPMKDFATLPIGYQSTCDSDETSELSSTSS 318
Query: 474 XRKDGVEGLNKAFTFSLSFFTLNQPSLEPWHFG 376
+ VEGLN S N PS + HFG
Sbjct: 319 EQTSDVEGLNAYNNLGASSDIENAPSSQ-LHFG 350
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 25.0 bits (52), Expect = 9.3
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +1
Query: 274 KEVS---SYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 399
KEVS SYI +P +G+ +N+++P + P FKG
Sbjct: 159 KEVSTSKSYISSGYLHPKTSPIFKKNGYATENVVDPISSSPRFKG 203
>SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1274
Score = 25.0 bits (52), Expect = 9.3
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -1
Query: 617 VMLPGAKTTTVPGFRIPVSTLPTGTVPIPPIWYTSCRGRRRALSVGRAXGRMASRASIR 441
+ PG T+VP + + S L GT P ++C G LS +A + + A+I+
Sbjct: 487 IYAPGGAITSVPPYSLQNSQLMNGTSMSSP---SACGGISLILSALKAQKKPYTAAAIK 542
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 25.0 bits (52), Expect = 9.3
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = -1
Query: 287 EETSFLISSNRDSLYGGSVESILFTPTISCLTPSVKASRACSRVCPFFEIPAS-NSPVPA 111
E + + ISSN S S FT + S TP++ S + V + +S +SP+ +
Sbjct: 757 ETSGYTISSN-SSQNSASEPQTAFTSSSSSATPTITQSSISTSVSSQSSMNSSYSSPISS 815
Query: 110 ATISTAQS 87
+++++ S
Sbjct: 816 NSVTSSTS 823
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.136 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,774,771
Number of Sequences: 5004
Number of extensions: 59904
Number of successful extensions: 279
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 271
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 287744314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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