Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_N10
(553 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 28 1.1
SPAC212.01c |||S. pombe specific DUF999 family protein 2|Schizos... 27 1.8
SPBCPT2R1.04c |||S. pombe specific DUF999 protein family 10|Schi... 27 1.8
SPAC212.04c |||S. pombe specific DUF999 family protein 1|Schizos... 27 1.8
SPBCPT2R1.01c ||SPBPB2B2.20c|S. pombe specific DUF999 protein fa... 27 1.8
SPBC1348.01 |||S. pombe specific DUF999 protein family 5|Schizos... 27 1.8
SPAC750.06c |||S. pombe specific DUF999 protein family 4|Schizos... 27 1.8
SPBC27B12.03c |||lathosterol oxidase |Schizosaccharomyces pombe|... 27 2.4
SPCC1393.10 |ctr4||copper transporter complex subunit Ctr4 |Schi... 26 4.2
SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces po... 25 5.6
SPAC3F10.13 |ucp6||UBA domain protein Ucp6|Schizosaccharomyces p... 25 7.4
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.9 bits (59), Expect = 1.1
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -3
Query: 299 TITSPFPFCSTTVTIYTSIPFPS*STQPI 213
T +SP P ST+ T TSIP ST P+
Sbjct: 327 TSSSPLPSTSTSCTTSTSIPPTGNSTTPV 355
Score = 27.5 bits (58), Expect = 1.4
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -3
Query: 299 TITSPFPFCSTTVTIYTSIPFPS*STQPI 213
T +SP P ST+ T TSIP ST P+
Sbjct: 273 TNSSPLPTTSTSCTTSTSIPPTGNSTTPV 301
>SPAC212.01c |||S. pombe specific DUF999 family protein
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 130 RSKDKK*SLFTDTNTLKVQEDKLQDKVTFMKWRIN 26
RS+ + SLFT NT+K Q+DK+ K +K +N
Sbjct: 48 RSRQSRQSLFT--NTIKPQKDKMNIKTNKIKEFLN 80
>SPBCPT2R1.04c |||S. pombe specific DUF999 protein family
10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 280
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 130 RSKDKK*SLFTDTNTLKVQEDKLQDKVTFMKWRIN 26
RS+ + SLFT NT+K Q+DK+ K +K +N
Sbjct: 48 RSRQSRQSLFT--NTIKPQKDKMNIKTNKIKEFLN 80
>SPAC212.04c |||S. pombe specific DUF999 family protein
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 288
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 130 RSKDKK*SLFTDTNTLKVQEDKLQDKVTFMKWRIN 26
RS+ + SLFT NT+K Q+DK+ K +K +N
Sbjct: 48 RSRQSRQSLFT--NTIKPQKDKMNIKTNKIKEFLN 80
>SPBCPT2R1.01c ||SPBPB2B2.20c|S. pombe specific DUF999 protein
family 9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 269
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 130 RSKDKK*SLFTDTNTLKVQEDKLQDKVTFMKWRIN 26
RS+ + SLFT NT+K Q+DK+ K +K +N
Sbjct: 48 RSRQSRQSLFT--NTIKPQKDKMNIKTNKIKEFLN 80
>SPBC1348.01 |||S. pombe specific DUF999 protein family
5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 269
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 130 RSKDKK*SLFTDTNTLKVQEDKLQDKVTFMKWRIN 26
RS+ + SLFT NT+K Q+DK+ K +K +N
Sbjct: 48 RSRQSRQSLFT--NTIKPQKDKMNIKTNKIKEFLN 80
>SPAC750.06c |||S. pombe specific DUF999 protein family
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 130 RSKDKK*SLFTDTNTLKVQEDKLQDKVTFMKWRIN 26
RS+ + SLFT NT+K Q+DK+ K +K +N
Sbjct: 48 RSRQSRQSLFT--NTIKPQKDKMNIKTNKIKEFLN 80
>SPBC27B12.03c |||lathosterol oxidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 329
Score = 26.6 bits (56), Expect = 2.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 2 HEAFIHNHIYSPLHKCH 52
H A H +Y+PLHK H
Sbjct: 170 HRALHHRWLYAPLHKLH 186
>SPCC1393.10 |ctr4||copper transporter complex subunit Ctr4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +1
Query: 127 SLKLIQTGKKYLSMLLERQKFPLTCSCCQIGCVDHEG 237
+L+L++ G++ R+ P + SCC G H G
Sbjct: 159 ALELVRRGQREFDRWCVRRFSPASNSCCHSGAPVHSG 195
>SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 472
Score = 25.4 bits (53), Expect = 5.6
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +3
Query: 9 HLYTITFILHFINVTLSCSLSSWTF 83
+LY+I +L + L C LS+W++
Sbjct: 140 YLYSILILLFLSHCVLRCCLSNWSW 164
>SPAC3F10.13 |ucp6||UBA domain protein Ucp6|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 612
Score = 25.0 bits (52), Expect = 7.4
Identities = 14/61 (22%), Positives = 22/61 (36%)
Frame = +1
Query: 259 VTVVEQKGNGEVMVTYHERMNAFLDYDCAXXXXXXXXXXXNEFLTDIFRVITDNNNHVKH 438
VT E E ++YH R+ ++D DC F+ + D + H
Sbjct: 495 VTFEEVDLEFEKHISYHNRLLIYVDDDCEASTRTVIPTSVKNFIAEDNEYFDDELAGIIH 554
Query: 439 S 441
S
Sbjct: 555 S 555
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,844,174
Number of Sequences: 5004
Number of extensions: 32227
Number of successful extensions: 81
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 81
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 229961028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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