Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_N10
         (553 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   2.1  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    23   2.7  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    23   2.7  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    21   6.3  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +1

Query: 124 CSLKLIQTGKKYLSMLLERQKFPLTCSCCQIG 219
           CS   IQ+G+  + M     + P  C  C  G
Sbjct: 181 CSKTFIQSGQLVIHMRTHTGEKPYVCKACGKG 212


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +1

Query: 418 NNNHVKHSVNHFRILYRNRVI 480
           NNN+  +  N+++ LY+N +I
Sbjct: 102 NNNYNNNYNNNYKKLYKNYII 122


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +1

Query: 418 NNNHVKHSVNHFRILYRNRVI 480
           NNN+  +  N+++ LY+N +I
Sbjct: 102 NNNYNNNYNNNYKKLYKNYII 122


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 516 YNFVHLNNYS*KYN 475
           YN+ + NNY+  YN
Sbjct: 89  YNYSNYNNYNNNYN 102


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,656
Number of Sequences: 438
Number of extensions: 2320
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)