Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_N06
         (579 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    25   0.71 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    24   0.94 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   1.6  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    22   3.8  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 438 GAACEYQKQEFLFKHFSLKI*SYIFFMTNYFHK 340
           G   E +++EFL K F   I    +F+ +Y HK
Sbjct: 642 GFDLEPRQKEFLPKEFPANIEGTSYFLNDYKHK 674


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 322 PFWTCHLMKIICHK 363
           PF+TC++M  IC K
Sbjct: 634 PFFTCNIMDAICTK 647


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 282 HKSSSCFKSFVLSVRFV*ESRTNT 211
           HK + C K+F+ S + V   RT+T
Sbjct: 176 HKCTVCSKTFIQSGQLVIHMRTHT 199


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 534 RLV*EVSLVVFICLYVELIWV 472
           R+V  V+ ++F  LY   IW+
Sbjct: 449 RIVFPVAFIIFNILYWSFIWI 469


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,260
Number of Sequences: 438
Number of extensions: 3623
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)