Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_N05
(460 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0081 + 645214-645228,645791-645856,645973-646142,646265-64... 97 8e-21
03_05_0776 + 27625122-27625415,27627226-27627273,27627455-276275... 96 1e-20
07_01_0453 + 3420727-3420800,3421666-3421792,3422348-3422431,342... 95 3e-20
10_08_0568 + 18837195-18837203,18837694-18837741,18837853-188379... 94 4e-20
03_02_0919 - 12392471-12392636,12392740-12392931,12393366-123934... 87 6e-18
02_05_0941 + 32953065-32953089,32954252-32954406,32954486-329545... 40 0.001
06_03_0921 + 25949453-25949986,25950150-25950188,25950380-259504... 40 0.001
02_01_0622 - 4658133-4658150,4658269-4658337,4658436-4658462,465... 32 0.19
04_04_0373 - 24785799-24786200,24787979-24788161,24790909-247911... 28 3.1
02_05_0408 + 28720508-28721052,28721346-28721430,28721520-287216... 28 4.2
08_02_0719 + 20388246-20390756,20391159-20391263 27 5.5
06_03_0207 - 17927753-17927983,17928077-17928178,17928273-179285... 27 5.5
07_01_0867 - 7198874-7199764 27 7.3
07_03_1659 - 28432628-28433092 27 9.6
05_03_0493 + 14691853-14692383 27 9.6
>03_01_0081 +
645214-645228,645791-645856,645973-646142,646265-646319,
646434-646499,646604-646687,647091-647168,647425-647508,
648000-648302,648402-648572,649098-649288,649406-649808,
650368-650619,650696-651196,651306-651403,651810-651911,
652016-652178
Length = 933
Score = 96.7 bits (230), Expect = 8e-21
Identities = 47/156 (30%), Positives = 83/156 (53%), Gaps = 12/156 (7%)
Frame = +2
Query: 11 SEEGKMENV--ENFDNYQRYDCRQMXXXXXXXXXXXXXXXPHAMTLPICSRSGDVIEHLP 184
+++GK+ N F+ R+ R + M L +CSR+ DV+E +
Sbjct: 332 TDDGKINNYGGAQFEGMPRFTARVAVIEALKAKGLYKETKKNEMCLGVCSRTNDVVEPMI 391
Query: 185 KEQWFLSCSDMNERAANLVKNNSLKIQPDRFIKHWLDWSKDDKDWCISRQLWWGHQIPAY 364
K QWF++C+ M + + V++ ++I P ++ + W W + +DWC+SRQLWWGH++PA+
Sbjct: 392 KPQWFVNCNTMAKAGIDAVRSKRIEIIPQQYEQDWYRWLANIRDWCVSRQLWWGHRVPAW 451
Query: 365 KC---NANKDII------WIAANDETSAKLGA-SKY 442
+ ++I+ W+ A +E+ A L A KY
Sbjct: 452 YVVLEDDQENILGSDNDRWVVARNESEANLEAHQKY 487
>03_05_0776 +
27625122-27625415,27627226-27627273,27627455-27627514,
27627633-27627802,27627901-27627973,27628096-27628161,
27628262-27628345,27628681-27628758,27629009-27629092,
27629835-27630137,27630227-27630397,27630971-27631161,
27631284-27631686,27632246-27632497,27632577-27633077,
27633181-27633278,27633400-27633499,27633722-27633867,
27633973-27634138
Length = 1095
Score = 95.9 bits (228), Expect = 1e-20
Identities = 47/154 (30%), Positives = 80/154 (51%), Gaps = 11/154 (7%)
Frame = +2
Query: 11 SEEGKMENV--ENFDNYQRYDCRQMXXXXXXXXXXXXXXXPHAMTLPICSRSGDVIEHLP 184
+++GK+ N F R+ R + M+L +CSR+ DV+E +
Sbjct: 445 TDDGKINNNGGAQFVGIPRFTARVAVIEALKAKGLYKETKKNEMSLGVCSRTNDVVEPMI 504
Query: 185 KEQWFLSCSDMNERAANLVKNNSLKIQPDRFIKHWLDWSKDDKDWCISRQLWWGHQIPAY 364
K QWF++C+ M + + V++ ++I P ++ + W W + +DWCISRQLWWGH++PA+
Sbjct: 505 KPQWFVNCNTMAQAGIDAVRSKRIEIIPQQYEQDWYRWLANIRDWCISRQLWWGHRVPAW 564
Query: 365 ---------KCNANKDIIWIAANDETSAKLGASK 439
K + + WI A +E+ A L A +
Sbjct: 565 YVILEDDQEKILGSANGRWIVARNESEANLEAQQ 598
>07_01_0453 +
3420727-3420800,3421666-3421792,3422348-3422431,
3422550-3422644,3423063-3423154,3423326-3423379,
3424221-3424273,3424472-3424539,3424777-3424852,
3425159-3425242,3425793-3425941,3426375-3426492,
3426583-3426699,3426950-3427170,3427503-3427536,
3427585-3427685,3427832-3427943,3428379-3428504,
3428579-3428716,3428808-3428858,3428938-3429050,
3430253-3430318,3430582-3430729,3430826-3430930,
3431017-3431118,3431495-3431567,3431647-3431813,
3431906-3432028
Length = 956
Score = 94.7 bits (225), Expect = 3e-20
Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 4/153 (2%)
Frame = +2
Query: 8 VSEEGKMENVEN-FDNYQRYDCRQMXXXXXXXXXXXXXXXPHAMTLPICSRSGDVIEHLP 184
++++G + +V + R++ R+ P+ + +P R G+VIE L
Sbjct: 305 MNKDGTLNDVAGLYSGMDRFEAREKLWSDLVETNLAVKKEPYTLRVPRSQRGGEVIEPLI 364
Query: 185 KEQWFLSCSDMNERAANLVKNNSLKIQPDRFIKHWLDWSKDDKDWCISRQLWWGHQIPAY 364
+QWF++ + E+A + V+ L I P+RF K + W + KDWCISRQLWWGH+IP +
Sbjct: 365 SKQWFVTMDPLAEKALHAVEKGQLTILPERFEKIYNHWLTNIKDWCISRQLWWGHRIPVW 424
Query: 365 KCNANK---DIIWIAANDETSAKLGASKYLRSV 454
K D I + +E AK KY +SV
Sbjct: 425 YIVGKKCEEDYIVARSAEEALAK-AQEKYGKSV 456
>10_08_0568 +
18837195-18837203,18837694-18837741,18837853-18837912,
18837986-18838155,18838297-18838369,18838529-18838594,
18838685-18838768,18838950-18839027,18839122-18839205,
18839562-18839641,18839791-18839848,18839933-18840235,
18840361-18840531,18840972-18841204,18841303-18841705,
18841961-18842212,18842293-18842790,18843073-18843170,
18843314-18843413,18843653-18843798,18843912-18844068
Length = 1056
Score = 94.3 bits (224), Expect = 4e-20
Identities = 46/111 (41%), Positives = 68/111 (61%), Gaps = 9/111 (8%)
Frame = +2
Query: 134 MTLPICSRSGDVIEHLPKEQWFLSCSDMNERAANLVKNNSLKIQPDRFIKHWLDWSKDDK 313
M L CSR+ D++E + K QWF+ CS M + A + VK ++I P ++ + W W ++ +
Sbjct: 453 MRLGRCSRTKDIVEPMMKPQWFVDCSTMAKAALDAVKTKRIEIIPIQYEQDWYRWLENIR 512
Query: 314 DWCISRQLWWGHQIPAY----KCNANKDI-----IWIAANDETSAKLGASK 439
DWCISRQLWWGH+IPA+ + + KDI WI A +E+ A L A +
Sbjct: 513 DWCISRQLWWGHRIPAWYVTLEDDEEKDIGSYIDHWIIARNESDAILEAKQ 563
>03_02_0919 -
12392471-12392636,12392740-12392931,12393366-12393463,
12393719-12394219,12394287-12394532,12395627-12396029,
12396155-12396348,12396755-12396925,12397064-12397366,
12397463-12397520,12397678-12397757,12398910-12398987,
12399530-12399613,12399692-12399757,12399908-12399980,
12400080-12400249,12400368-12400427,12400632-12400679,
12401217-12401255,12401364-12401372
Length = 1012
Score = 87.0 bits (206), Expect = 6e-18
Identities = 39/111 (35%), Positives = 68/111 (61%), Gaps = 10/111 (9%)
Frame = +2
Query: 137 TLPICSRSGDVIEHLPKE-QWFLSCSDMNERAANLVKNNSLKIQPDRFIKHWLDWSKDDK 313
+L ICSR+ D++E + K QWF++C+ M + A + V++ ++I P ++ + W W ++ +
Sbjct: 425 SLGICSRTNDIVEPMIKSPQWFVNCNTMAKVALDAVRSKRIEIIPPQYEQDWYRWLENIR 484
Query: 314 DWCISRQLWWGHQIPAY---------KCNANKDIIWIAANDETSAKLGASK 439
DWC+SRQ WWGH++PA+ K + + WI A E++A + A K
Sbjct: 485 DWCVSRQHWWGHRVPAWYVTLEDDQEKTLGSDNDRWIVAKSESAASVEAQK 535
>02_05_0941 +
32953065-32953089,32954252-32954406,32954486-32954587,
32955089-32955140,32955237-32955349,32955542-32955610,
32955942-32956049,32956517-32956661,32957245-32957476,
32957567-32957853,32957951-32958087,32958520-32958667,
32959464-32959595,32960239-32960367,32960707-32960834,
32960911-32961075,32961462-32961587,32962088-32962161,
32962285-32962534,32962875-32963054,32963128-32963361,
32964771-32964840,32965065-32965177,32965403-32965511,
32965639-32965688,32965823-32965889,32966131-32966203,
32966393-32966448,32966729-32966831,32967377-32967458,
32967717-32967779,32967918-32967977,32968356-32968448,
32968561-32968623,32968699-32968797
Length = 1363
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +2
Query: 125 PHAMTLPICSRSGDVIEHLPKEQWFLSCSDMNERAANLVKNNSLKIQPDRFIKHWLDWSK 304
P+ P RS + EQWF S A + ++ S P + + +
Sbjct: 428 PYKHKYPYDWRSKEPTIFRATEQWFASVDGFRNAAMDAIRRVSWI--PSQAENRIVAMTS 485
Query: 305 DDKDWCISRQLWWGHQIPA-YKCNANKDII 391
DWCISRQ WG IP Y ++N+ +I
Sbjct: 486 SRSDWCISRQRTWGVPIPVFYHVDSNEPLI 515
>06_03_0921 +
25949453-25949986,25950150-25950188,25950380-25950445,
25950526-25950669,25951416-25951612,25952281-25952443,
25952760-25952873,25953304-25953401,25953964-25954042,
25954356-25954514,25954690-25954779,25955790-25955923,
25956513-25956672,25956826-25956909,25957000-25957167,
25957321-25957446,25958088-25958225,25958311-25958414,
25958832-25958895,25959229-25959317,25959393-25959534,
25959937-25960000,25960085-25960152,25960399-25960521,
25960604-25960669,25960857-25960962,25961076-25961167,
25961243-25961344
Length = 1170
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 143 PICSRSGDVIEHLPKEQWFLSCSDMNERAANLVKNNSLKIQPDRFI-KHWLDWSKDDKDW 319
P C RSG + + WF+ + ++ L N PD K + +W + +DW
Sbjct: 435 PFCWRSGTPLIYRAVPSWFVKVEKIRDQL--LECNKQTYWVPDYVKEKRFHNWLEGARDW 492
Query: 320 CISRQLWWGHQIPAYKCNANKDII 391
+SR +WG +P + ++I+
Sbjct: 493 AVSRSRFWGTPLPLWISQDGEEIV 516
>02_01_0622 -
4658133-4658150,4658269-4658337,4658436-4658462,
4658808-4658873,4658954-4659076,4659562-4659629,
4659703-4659766,4659994-4660135,4660218-4660306,
4660574-4660637,4660870-4661021,4661124-4661261,
4661742-4661867,4661971-4662183,4662343-4662426,
4662583-4662742,4662993-4663126,4664047-4664136,
4664313-4664471,4665528-4665611,4666170-4666289,
4666338-4666391,4666899-4666945,4667556-4667598,
4667730-4668586,4668845-4668899
Length = 1081
Score = 32.3 bits (70), Expect = 0.19
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 281 KHWLDWSKDDKDWCISRQLWWGHQIPAYKCNANKDIIWIAANDE 412
K + +W + +DW +SR +WG +P + ++II + + D+
Sbjct: 422 KRFHNWLEGARDWAVSRTRFWGTPLPLWISQDGEEIIVMDSVDK 465
>04_04_0373 -
24785799-24786200,24787979-24788161,24790909-24791170,
24791565-24791656
Length = 312
Score = 28.3 bits (60), Expect = 3.1
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +2
Query: 317 WCISRQLWWGHQIPAYKCNANKDI 388
WCI Q WW + A AN+ I
Sbjct: 26 WCIGLQAWWTRETVAVVTGANRGI 49
>02_05_0408 +
28720508-28721052,28721346-28721430,28721520-28721604,
28721775-28722019,28722250-28722501
Length = 403
Score = 27.9 bits (59), Expect = 4.2
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -1
Query: 352 LMAPPQLS*YTPIFIIFRPIEPMFDESVR--LDF 257
L+ PP+L IF+I + PMFDE VR LDF
Sbjct: 161 LLDPPELIQPPKIFVI-EGLHPMFDERVRDLLDF 193
>08_02_0719 + 20388246-20390756,20391159-20391263
Length = 871
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2
Query: 225 LSFISLHDKNHCSFGRCSMTSPDR 154
LS ++L DKNH ++GR +TS +R
Sbjct: 291 LSDLALPDKNHPNYGRVIVTSRNR 314
>06_03_0207 -
17927753-17927983,17928077-17928178,17928273-17928502,
17929257-17929343,17931263-17931389,17931485-17931628,
17931920-17931985,17932136-17932254,17932437-17932551,
17932626-17932732,17932969-17932983,17933810-17933900,
17934528-17934671,17934750-17934980,17935093-17935248,
17935330-17935483,17935973-17936117,17936241-17936355
Length = 792
Score = 27.5 bits (58), Expect = 5.5
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = +2
Query: 197 FLSCSDMNERAANLVKNNSLK-IQPDRFIKHWLDWSKDD-KDWCISRQLWWGHQIPAYKC 370
FL ++++ N + S+ + I+ W K+ K CI+R L WG +P K
Sbjct: 205 FLELPLLSDKLVNYINETSVAGMWSQNAIQATNAWLKEGLKPRCITRDLKWGVPVPHEKY 264
Query: 371 NANKDIIWIAA 403
+W A
Sbjct: 265 KDKVFYVWFDA 275
>07_01_0867 - 7198874-7199764
Length = 296
Score = 27.1 bits (57), Expect = 7.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 374 ANKDIIWIAANDETSAKLGASKYLRSV 454
A +D+IW+ A D T+ + G K LR +
Sbjct: 255 ALEDLIWVDAYDPTTVQFGGVKRLRKL 281
>07_03_1659 - 28432628-28433092
Length = 154
Score = 26.6 bits (56), Expect = 9.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 125 PHAMTLPICSRSGDVIEHLPKEQWFL 202
PHA +L +C R D I HL + W L
Sbjct: 33 PHAYSL-LCRRRSDGIHHLLVDPWLL 57
>05_03_0493 + 14691853-14692383
Length = 176
Score = 26.6 bits (56), Expect = 9.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 125 PHAMTLPICSRSGDVIEHLPKEQWFLSC 208
PHA T+ + + GDV+ + Q + SC
Sbjct: 124 PHAATVIVVTAHGDVVTTAARSQHYCSC 151
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,138,731
Number of Sequences: 37544
Number of extensions: 212203
Number of successful extensions: 457
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 456
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 907440304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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