Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_N02
         (514 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011116-1|AAR82783.1|  939|Drosophila melanogaster LD16337p pro...   252   2e-67
AE014296-475|AAS64945.1| 1102|Drosophila melanogaster CG16973-PD...   252   2e-67
AE014296-474|AAS64944.1| 1102|Drosophila melanogaster CG16973-PC...   252   2e-67
AE014296-473|AAS64943.1| 1042|Drosophila melanogaster CG16973-PE...   252   2e-67
AE014296-472|AAF47658.3| 1504|Drosophila melanogaster CG16973-PA...   252   2e-67
AE014296-471|AAS64942.1| 1200|Drosophila melanogaster CG16973-PB...   252   2e-67
AY051698-1|AAK93122.1| 1637|Drosophila melanogaster LD24220p pro...    33   0.30 
AF029395-1|AAB96643.1| 1613|Drosophila melanogaster Genghis Khan...    33   0.30 
AE013599-3814|AAF47163.1| 1637|Drosophila melanogaster CG4012-PA...    33   0.30 
DQ431009-1|ABD85474.1|  498|Drosophila melanogaster male germlin...    32   0.40 
AE014134-2954|AAN11010.1|  430|Drosophila melanogaster CG31801-P...    29   4.9  

>BT011116-1|AAR82783.1|  939|Drosophila melanogaster LD16337p
           protein.
          Length = 939

 Score =  252 bits (618), Expect = 2e-67
 Identities = 118/125 (94%), Positives = 122/125 (97%)
 Frame = +2

Query: 140 SRRESHVNVNVTPTGHDLSSDTPEIRKYKKRFNSEILCAALWGVNLLIGTENGLMLLDRS 319
           SRRESHVNVNVTPT H+ ++DTPEIRKYKKRFNSEILCAALWGVNLLIGTENGLMLLDRS
Sbjct: 591 SRRESHVNVNVTPTSHEAANDTPEIRKYKKRFNSEILCAALWGVNLLIGTENGLMLLDRS 650

Query: 320 GQGKVYQLISRRRFQQMEVLEGQNILVTVSGKKNRVRVYYLSWLKSKILRTDGLSDQAER 499
           GQGKVYQLISRRRFQQMEVLEGQNILVT+SGKKNRVRVYYLSWLKSKILRTDGLSDQ ER
Sbjct: 651 GQGKVYQLISRRRFQQMEVLEGQNILVTISGKKNRVRVYYLSWLKSKILRTDGLSDQVER 710

Query: 500 RNGWI 514
           RNGWI
Sbjct: 711 RNGWI 715


>AE014296-475|AAS64945.1| 1102|Drosophila melanogaster CG16973-PD,
            isoform D protein.
          Length = 1102

 Score =  252 bits (618), Expect = 2e-67
 Identities = 118/125 (94%), Positives = 122/125 (97%)
 Frame = +2

Query: 140  SRRESHVNVNVTPTGHDLSSDTPEIRKYKKRFNSEILCAALWGVNLLIGTENGLMLLDRS 319
            SRRESHVNVNVTPT H+ ++DTPEIRKYKKRFNSEILCAALWGVNLLIGTENGLMLLDRS
Sbjct: 754  SRRESHVNVNVTPTSHEAANDTPEIRKYKKRFNSEILCAALWGVNLLIGTENGLMLLDRS 813

Query: 320  GQGKVYQLISRRRFQQMEVLEGQNILVTVSGKKNRVRVYYLSWLKSKILRTDGLSDQAER 499
            GQGKVYQLISRRRFQQMEVLEGQNILVT+SGKKNRVRVYYLSWLKSKILRTDGLSDQ ER
Sbjct: 814  GQGKVYQLISRRRFQQMEVLEGQNILVTISGKKNRVRVYYLSWLKSKILRTDGLSDQVER 873

Query: 500  RNGWI 514
            RNGWI
Sbjct: 874  RNGWI 878


>AE014296-474|AAS64944.1| 1102|Drosophila melanogaster CG16973-PC,
            isoform C protein.
          Length = 1102

 Score =  252 bits (618), Expect = 2e-67
 Identities = 118/125 (94%), Positives = 122/125 (97%)
 Frame = +2

Query: 140  SRRESHVNVNVTPTGHDLSSDTPEIRKYKKRFNSEILCAALWGVNLLIGTENGLMLLDRS 319
            SRRESHVNVNVTPT H+ ++DTPEIRKYKKRFNSEILCAALWGVNLLIGTENGLMLLDRS
Sbjct: 754  SRRESHVNVNVTPTSHEAANDTPEIRKYKKRFNSEILCAALWGVNLLIGTENGLMLLDRS 813

Query: 320  GQGKVYQLISRRRFQQMEVLEGQNILVTVSGKKNRVRVYYLSWLKSKILRTDGLSDQAER 499
            GQGKVYQLISRRRFQQMEVLEGQNILVT+SGKKNRVRVYYLSWLKSKILRTDGLSDQ ER
Sbjct: 814  GQGKVYQLISRRRFQQMEVLEGQNILVTISGKKNRVRVYYLSWLKSKILRTDGLSDQVER 873

Query: 500  RNGWI 514
            RNGWI
Sbjct: 874  RNGWI 878


>AE014296-473|AAS64943.1| 1042|Drosophila melanogaster CG16973-PE,
            isoform E protein.
          Length = 1042

 Score =  252 bits (618), Expect = 2e-67
 Identities = 118/125 (94%), Positives = 122/125 (97%)
 Frame = +2

Query: 140  SRRESHVNVNVTPTGHDLSSDTPEIRKYKKRFNSEILCAALWGVNLLIGTENGLMLLDRS 319
            SRRESHVNVNVTPT H+ ++DTPEIRKYKKRFNSEILCAALWGVNLLIGTENGLMLLDRS
Sbjct: 694  SRRESHVNVNVTPTSHEAANDTPEIRKYKKRFNSEILCAALWGVNLLIGTENGLMLLDRS 753

Query: 320  GQGKVYQLISRRRFQQMEVLEGQNILVTVSGKKNRVRVYYLSWLKSKILRTDGLSDQAER 499
            GQGKVYQLISRRRFQQMEVLEGQNILVT+SGKKNRVRVYYLSWLKSKILRTDGLSDQ ER
Sbjct: 754  GQGKVYQLISRRRFQQMEVLEGQNILVTISGKKNRVRVYYLSWLKSKILRTDGLSDQVER 813

Query: 500  RNGWI 514
            RNGWI
Sbjct: 814  RNGWI 818


>AE014296-472|AAF47658.3| 1504|Drosophila melanogaster CG16973-PA,
            isoform A protein.
          Length = 1504

 Score =  252 bits (618), Expect = 2e-67
 Identities = 118/125 (94%), Positives = 122/125 (97%)
 Frame = +2

Query: 140  SRRESHVNVNVTPTGHDLSSDTPEIRKYKKRFNSEILCAALWGVNLLIGTENGLMLLDRS 319
            SRRESHVNVNVTPT H+ ++DTPEIRKYKKRFNSEILCAALWGVNLLIGTENGLMLLDRS
Sbjct: 1156 SRRESHVNVNVTPTSHEAANDTPEIRKYKKRFNSEILCAALWGVNLLIGTENGLMLLDRS 1215

Query: 320  GQGKVYQLISRRRFQQMEVLEGQNILVTVSGKKNRVRVYYLSWLKSKILRTDGLSDQAER 499
            GQGKVYQLISRRRFQQMEVLEGQNILVT+SGKKNRVRVYYLSWLKSKILRTDGLSDQ ER
Sbjct: 1216 GQGKVYQLISRRRFQQMEVLEGQNILVTISGKKNRVRVYYLSWLKSKILRTDGLSDQVER 1275

Query: 500  RNGWI 514
            RNGWI
Sbjct: 1276 RNGWI 1280


>AE014296-471|AAS64942.1| 1200|Drosophila melanogaster CG16973-PB,
            isoform B protein.
          Length = 1200

 Score =  252 bits (618), Expect = 2e-67
 Identities = 118/125 (94%), Positives = 122/125 (97%)
 Frame = +2

Query: 140  SRRESHVNVNVTPTGHDLSSDTPEIRKYKKRFNSEILCAALWGVNLLIGTENGLMLLDRS 319
            SRRESHVNVNVTPT H+ ++DTPEIRKYKKRFNSEILCAALWGVNLLIGTENGLMLLDRS
Sbjct: 852  SRRESHVNVNVTPTSHEAANDTPEIRKYKKRFNSEILCAALWGVNLLIGTENGLMLLDRS 911

Query: 320  GQGKVYQLISRRRFQQMEVLEGQNILVTVSGKKNRVRVYYLSWLKSKILRTDGLSDQAER 499
            GQGKVYQLISRRRFQQMEVLEGQNILVT+SGKKNRVRVYYLSWLKSKILRTDGLSDQ ER
Sbjct: 912  GQGKVYQLISRRRFQQMEVLEGQNILVTISGKKNRVRVYYLSWLKSKILRTDGLSDQVER 971

Query: 500  RNGWI 514
            RNGWI
Sbjct: 972  RNGWI 976


>AY051698-1|AAK93122.1| 1637|Drosophila melanogaster LD24220p protein.
          Length = 1637

 Score = 32.7 bits (71), Expect = 0.30
 Identities = 18/63 (28%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
 Frame = +2

Query: 248  LCAALWGVN-LLIGTENGLMLLDRSGQGKVYQLISRRRFQQMEVLEGQNILVTVSGKKNR 424
            LC+ +   N +L+GTE+GL  ++   Q ++ ++   ++  Q+  +E + ILV + GK+  
Sbjct: 1207 LCSVIIYPNQILLGTEDGLFYINLD-QYEIARIGESKKILQLWYIEEEQILVILCGKQRN 1265

Query: 425  VRV 433
            +R+
Sbjct: 1266 LRL 1268


>AF029395-1|AAB96643.1| 1613|Drosophila melanogaster Genghis Khan
            protein.
          Length = 1613

 Score = 32.7 bits (71), Expect = 0.30
 Identities = 18/63 (28%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
 Frame = +2

Query: 248  LCAALWGVN-LLIGTENGLMLLDRSGQGKVYQLISRRRFQQMEVLEGQNILVTVSGKKNR 424
            LC+ +   N +L+GTE+GL  ++   Q ++ ++   ++  Q+  +E + ILV + GK+  
Sbjct: 1183 LCSVIIYPNQILLGTEDGLFYINLD-QYEIARIGESKKILQLWYIEEEQILVILCGKQRN 1241

Query: 425  VRV 433
            +R+
Sbjct: 1242 LRL 1244


>AE013599-3814|AAF47163.1| 1637|Drosophila melanogaster CG4012-PA
            protein.
          Length = 1637

 Score = 32.7 bits (71), Expect = 0.30
 Identities = 18/63 (28%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
 Frame = +2

Query: 248  LCAALWGVN-LLIGTENGLMLLDRSGQGKVYQLISRRRFQQMEVLEGQNILVTVSGKKNR 424
            LC+ +   N +L+GTE+GL  ++   Q ++ ++   ++  Q+  +E + ILV + GK+  
Sbjct: 1207 LCSVIIYPNQILLGTEDGLFYINLD-QYEIARIGESKKILQLWYIEEEQILVILCGKQRN 1265

Query: 425  VRV 433
            +R+
Sbjct: 1266 LRL 1268


>DQ431009-1|ABD85474.1|  498|Drosophila melanogaster male germline
           specific protein protein.
          Length = 498

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
 Frame = +1

Query: 313 SVRSREGVPVDISTPLPA--DGSVGRAEYTRDGIREKESRTSLLSQLAQVQNIT 468
           S+   +  P +I  PLP   D S+ R EY +D IRE ESR + L   + V++++
Sbjct: 18  SLEGEQFDPWEIPFPLPEQEDPSMCRDEYLKDLIREHESRVASLVVRSTVRDVS 71


>AE014134-2954|AAN11010.1|  430|Drosophila melanogaster CG31801-PA
           protein.
          Length = 430

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
 Frame = +1

Query: 343 DISTPLPA--DGSVGRAEYTRDGIREKESRTSLLSQLAQVQNIT 468
           +I  PLP   D S+ R E+ +D IRE ESR + L   + V++++
Sbjct: 28  EIPFPLPEQEDPSMCRDEFLKDLIREHESRVASLVVRSTVRDVS 71


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,037,274
Number of Sequences: 53049
Number of extensions: 401845
Number of successful extensions: 1392
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1392
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)