Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_N02
         (514 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   3.2  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   4.3  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   7.5  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   9.9  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = +2

Query: 332 VYQLISRRRFQQMEVLEGQNILV-TVSGKKNRVRV 433
           VY+++ +       + E QNI +    GK N+  +
Sbjct: 158 VYEILPQHHLDSRVIQEAQNIAIQNTQGKNNQQNI 192


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +1

Query: 328 EGVPVDISTPLPADGSVGRAEYTRDGIRE 414
           E V  D+  PLP    +   E+T D +R+
Sbjct: 365 EFVTFDLDEPLPPPPPIRGGEWTFDTLRK 393


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = -1

Query: 394  YILPFQHFHLLEAASRYQLVHLPL 323
            ++ PF+H H +        V+ PL
Sbjct: 982  FVTPFEHRHFISGIDSNLHVYAPL 1005


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -1

Query: 364 LEAASRYQLV 335
           LEAAS+YQ+V
Sbjct: 393 LEAASKYQIV 402


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -1

Query: 364 LEAASRYQLV 335
           LEAAS+YQ+V
Sbjct: 393 LEAASKYQIV 402


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,333
Number of Sequences: 438
Number of extensions: 2578
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)