Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_M21
(334 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0084 - 12286416-12286514,12286632-12286683,12286771-122868... 40 6e-04
03_05_0969 + 29283905-29284570,29284862-29284930,29286533-292866... 34 0.024
01_05_0652 - 23934604-23934636,23934783-23934893,23935000-239351... 33 0.056
01_01_0542 + 3975500-3975546,3976273-3976370,3976694-3976830,397... 32 0.098
02_02_0542 - 11352655-11352759,11353320-11353496,11353589-113536... 32 0.13
07_03_0153 - 14481421-14481506,14481933-14482111,14483046-144831... 30 0.39
06_03_0662 - 23229957-23230204,23231021-23231160,23231257-232313... 29 0.69
12_02_1066 + 25785749-25785868,25785953-25786141,25786250-257864... 29 0.91
08_01_1084 - 11120719-11120950,11121035-11121133,11122446-111228... 29 1.2
01_05_0653 - 23948911-23948937,23949031-23949141,23949361-239494... 29 1.2
03_01_0363 + 2827990-2828055,2828215-2829306,2829715-2829837,282... 28 1.6
01_06_0071 + 26177698-26177796,26178449-26178553,26178636-261787... 28 1.6
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 27 2.8
06_02_0107 - 11904636-11904699,11904940-11905013,11905671-119058... 27 2.8
01_01_0788 + 6111890-6112002,6112121-6112265,6113012-6113086,611... 27 2.8
08_01_0397 - 3509186-3510291,3510322-3512335 27 3.7
03_05_0724 - 27147479-27147706,27147830-27147920,27148002-271480... 27 3.7
10_08_0941 - 21717703-21718091,21718454-21718564,21718707-217187... 27 4.9
09_04_0514 - 18236061-18237392 27 4.9
03_05_1139 - 30689514-30689609,30689795-30689956,30691245-306912... 27 4.9
02_05_1194 - 34881450-34881593,34882023-34882220,34882522-348826... 27 4.9
04_04_0990 - 29955207-29955551,29955639-29955813,29955887-299560... 26 6.4
02_01_0790 + 5925048-5925165,5926133-5926268,5926832-5926913,592... 26 6.4
02_02_0497 + 10961079-10963824,10964182-10964282,10964759-109648... 26 8.5
01_05_0712 - 24531654-24531874,24532438-24532538,24532621-245327... 26 8.5
>01_03_0084 -
12286416-12286514,12286632-12286683,12286771-12286871,
12287498-12287650,12287703-12287762,12287872-12287998,
12288581-12288708,12289196-12289291,12289473-12289526,
12289603-12289689,12290954-12291057,12291163-12291246,
12291374-12291422,12291523-12291886,12292186-12292226
Length = 532
Score = 39.5 bits (88), Expect = 6e-04
Identities = 25/90 (27%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Frame = +2
Query: 68 GRNIIERCPVFSPDGESL-ALIVENIVRVYNVRTGEIVRTLE---TENYV---EELLAIE 226
G+ C FSPDG+ L + V+ I+ V++ +G++ + L+ E+++ + +L+++
Sbjct: 216 GKKTHPECARFSPDGQYLVSCSVDGIIEVWDYISGKLKKDLQYQADESFMMHDDAVLSVD 275
Query: 227 FPQNEDYNLVGCSTDGRITTWTWENGAVLR 316
F ++ + L S DG+I W G LR
Sbjct: 276 FSRDSEM-LASGSQDGKIKVWRIRTGQCLR 304
>03_05_0969 +
29283905-29284570,29284862-29284930,29286533-29286631,
29287016-29287324
Length = 380
Score = 34.3 bits (75), Expect = 0.024
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +2
Query: 62 IAGRNIIERCPVFSPDGESLAL-IVENIVRVYNVRTGEIVRTLETENYVEELLAIEFPQN 238
++G C FSP G LA + VRV+ VR+G +R L + E + +++F
Sbjct: 109 LSGHTNYAFCLAFSPHGNMLASGSFDETVRVWEVRSGRCLRVLPAHS--EPVTSVDF-NR 165
Query: 239 EDYNLVGCSTDGRITTWTWENGAVLR 316
+ +V S DG W G ++
Sbjct: 166 DGAMIVSGSYDGLCRIWDSATGHCIK 191
>01_05_0652 -
23934604-23934636,23934783-23934893,23935000-23935188,
23935893-23936012,23936109-23936273,23936638-23936790,
23936867-23936976,23937280-23937397,23938197-23938427,
23938984-23939175,23939661-23939945,23940637-23940686,
23940846-23940921,23941048-23941135,23941689-23941771,
23941883-23942248,23942462-23942476,23942909-23943018,
23943134-23943231,23943961-23944019
Length = 883
Score = 33.1 bits (72), Expect = 0.056
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +2
Query: 98 FSPDGESLALI-VENIVRVYNV-RTGEIVRTLETENYVEELLAIEFPQNEDYNLVGCSTD 271
FSP LA + VRV++ T +RT + +++++F N++ + C D
Sbjct: 655 FSPSMSRLATSSFDKTVRVWDADNTSYSLRTFT--GHSASVMSLDFHPNKEDMICSCDGD 712
Query: 272 GRITTWTWENGAVL 313
G + +W+ NG+ L
Sbjct: 713 GEVRSWSINNGSCL 726
>01_01_0542 +
3975500-3975546,3976273-3976370,3976694-3976830,
3977518-3977871,3977953-3978041,3978502-3978589,
3978659-3978734,3978858-3978907,3979032-3979340,
3979803-3979982,3980086-3980325,3980471-3980582,
3980931-3981040,3981162-3981311,3981777-3981932,
3982289-3982405,3982759-3982839,3983338-3983478
Length = 844
Score = 32.3 bits (70), Expect = 0.098
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +2
Query: 98 FSPDGESLALI-VENIVRVYNV-RTGEIVRTLETENYVEELLAIEFPQNEDYNLVGCSTD 271
FSP LA + VRV++ G +RT + +++++F N+D + C D
Sbjct: 657 FSPSIPRLATSSFDKTVRVWDADNQGYSIRTFT--GHSASVMSLDFHPNKDDLICSCDGD 714
Query: 272 GRITTWTWENGAVLR 316
I W+ NG ++R
Sbjct: 715 NEIRFWSINNGNIVR 729
>02_02_0542 -
11352655-11352759,11353320-11353496,11353589-11353699,
11355606-11355667,11355739-11355941,11357109-11357281
Length = 276
Score = 31.9 bits (69), Expect = 0.13
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 2 HEVVVKINNSNDSIKYCLHKIAGRNIIERCPVFSPDGE 115
HE++V + ND IKYCL +AG +E C V + G+
Sbjct: 238 HELMVDV--MNDRIKYCLRHVAGN--VEECTVCAGTGK 271
>07_03_0153 -
14481421-14481506,14481933-14482111,14483046-14483130,
14483301-14483499,14484222-14484292,14484380-14484486,
14484571-14484703,14484870-14485020,14485147-14485249,
14485330-14485438,14485587-14485746,14486293-14486394,
14486892-14487009,14487596-14487750,14487850-14487948,
14488078-14488167
Length = 648
Score = 30.3 bits (65), Expect = 0.39
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = +2
Query: 95 VFSPDGESLALIVENIVRVYNVRTGEIVRTLETENYVEELLAIEFPQNEDYNLVGCSTDG 274
VF P + + + V+VY+++ ++V+ LE+ V E+ +I D +VG S DG
Sbjct: 487 VFHPSQKMFFVATKKFVQVYDLQKAQLVKKLESG--VREISSISIHPGGDNVIVG-SKDG 543
Query: 275 RI 280
++
Sbjct: 544 KL 545
>06_03_0662 -
23229957-23230204,23231021-23231160,23231257-23231394,
23231501-23231676,23232071-23232152,23233531-23233666,
23237028-23237145
Length = 345
Score = 29.5 bits (63), Expect = 0.69
Identities = 12/18 (66%), Positives = 18/18 (100%)
Frame = +2
Query: 143 VRVYNVRTGEIVRTLETE 196
VR+++VRTG+IV+TLET+
Sbjct: 170 VRLWDVRTGKIVQTLETK 187
>12_02_1066 +
25785749-25785868,25785953-25786141,25786250-25786414,
25786649-25786999,25787924-25788001,25788137-25788277,
25788415-25788459,25788597-25788763,25788833-25788911,
25788985-25789067,25789219-25789348,25789432-25789564,
25789955-25790103,25790339-25790534,25791086-25791288
Length = 742
Score = 29.1 bits (62), Expect = 0.91
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +2
Query: 68 GRNIIERCPVFSPDGESLALIVENIVRVYNVRTGEIVRTLE 190
G++ + P FS DG L V V++ TG +V LE
Sbjct: 5 GQSYVSAPPAFSADGRLLLACTGRTVSVFSASTGMLVSELE 45
>08_01_1084 -
11120719-11120950,11121035-11121133,11122446-11122849,
11123559-11124197
Length = 457
Score = 28.7 bits (61), Expect = 1.2
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Frame = +2
Query: 92 PVFS----PDGESLALIVE-NIVRVYNVRTGEIVRTLETENYVEELLAIEFPQNEDYNLV 256
P+FS P+ S + E N +++++ R G++ T + + +I+F Y L
Sbjct: 242 PIFSLCQAPNSPSSLYLAEGNDLKLFDERMGKVSATWNLHD--NRINSIDFHPENTYMLA 299
Query: 257 GCSTDGRITTWTWEN 301
STDG W N
Sbjct: 300 TSSTDGTACMWDLRN 314
>01_05_0653 -
23948911-23948937,23949031-23949141,23949361-23949441,
23949865-23949984,23950088-23950252,23950344-23950493,
23950565-23950674,23951401-23951518,23951597-23951827,
23952345-23952524,23953639-23953908,23954930-23954979,
23955213-23955288,23955396-23955483,23956010-23956101,
23956200-23956529,23957484-23957593,23957810-23957907,
23959538-23959566
Length = 811
Score = 28.7 bits (61), Expect = 1.2
Identities = 8/32 (25%), Positives = 21/32 (65%)
Frame = +2
Query: 212 LLAIEFPQNEDYNLVGCSTDGRITTWTWENGA 307
+++++F N++ + C +DG + W+ +NG+
Sbjct: 659 VVSLDFHPNKEDIICSCDSDGEVRCWSIDNGS 690
>03_01_0363 +
2827990-2828055,2828215-2829306,2829715-2829837,
2829994-2830110,2830248-2830429,2830558-2830744,
2830846-2831055,2831177-2831305,2832179-2832247,
2832751-2832873,2832957-2833007,2833101-2833250
Length = 832
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 20 INNSNDSIKYCLHKIAGRNIIERCPVFSPDGESLALIVENIVRVYNVRTGEIVRTLETE 196
++N N S Y + R+ I + S D L N V+++N TG+ +RT++++
Sbjct: 245 VDNENVSNMYSIEMHGHRSDIRSLALNSEDN-LLMSTSHNAVKIWNPSTGDCLRTIDSD 302
>01_06_0071 +
26177698-26177796,26178449-26178553,26178636-26178742,
26179466-26179620,26180140-26180228,26180353-26180875,
26181568-26181642,26181802-26182022,26182657-26182739,
26182826-26182937,26183206-26183280,26183346-26183525
Length = 607
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 98 FSPDGESLALIVENIVRVYNVRTGEIV 178
FSPDGE A + + V+V+ GEI+
Sbjct: 17 FSPDGELFAAVSDRRVQVWRTGGGEII 43
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +2
Query: 101 SPDGESLALIVENIVRVYNVRTGEIVRTLETENYVEELLAIEFPQNEDYNLVGCSTDGRI 280
+P+ E+ A ++ + + I + E+Y EL +FPQN + + T G I
Sbjct: 760 APNNEATARALQAALNIQQ-NLARIQAHVVPEHYEVELDINDFPQNARWKITHKETLGPI 818
Query: 281 TTWT 292
WT
Sbjct: 819 QDWT 822
>06_02_0107 -
11904636-11904699,11904940-11905013,11905671-11905802,
11910309-11911018,11911110-11911852,11911936-11913753,
11914037-11914338
Length = 1280
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = +2
Query: 71 RNIIERCPVFSPDGESLALIVENIVRVYNVRTGEIVRTLE 190
+ +I+R ++ DG++L +IVE+ R + ++ +I+ LE
Sbjct: 462 KGMIDRINLYLKDGDTLFIIVEDENRRHELKWEDIMNALE 501
>01_01_0788 +
6111890-6112002,6112121-6112265,6113012-6113086,
6114171-6114250,6115500-6115569,6115664-6115759,
6116633-6116756,6116921-6116967,6117044-6117127,
6117199-6117252,6117451-6117551,6118744-6118834,
6119989-6120153,6121341-6121412,6122025-6122111,
6122899-6122952,6122992-6123062,6123882-6124029
Length = 558
Score = 27.5 bits (58), Expect = 2.8
Identities = 24/88 (27%), Positives = 38/88 (43%)
Frame = +2
Query: 5 EVVVKINNSNDSIKYCLHKIAGRNIIERCPVFSPDGESLALIVENIVRVYNVRTGEIVRT 184
E VV + +S S + C + I+ + P+ S A + R VR G+ R
Sbjct: 278 EGVVYVVDSGFSKQKCYNPISDIESLVVAPI------SKASARQRAGRAGRVRPGKCFRL 331
Query: 185 LETENYVEELLAIEFPQNEDYNLVGCST 268
E Y++E+ P+ + NLV C T
Sbjct: 332 YTEEFYLKEMQPEGIPEMQRSNLVSCIT 359
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 194 ENYVEELLAIEFPQNEDYNLVGCSTDGRITTWT 292
E+Y EL +FPQN + + T G I WT
Sbjct: 938 EHYEAELEINDFPQNARWKITHKETLGPIQEWT 970
>03_05_0724 -
27147479-27147706,27147830-27147920,27148002-27148060,
27148197-27148312,27148389-27148472,27148677-27148824,
27148958-27149103,27149610-27149729,27149900-27149998,
27150787-27150828,27150915-27151017
Length = 411
Score = 27.1 bits (57), Expect = 3.7
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 131 VENIVRVYNVRTGEIVRTLETENYVEELLAIEFPQNEDYNLVGCSTDG 274
++ +VR+++ +GE VR V + LA+ N ++V STDG
Sbjct: 356 IDGMVRIWDSLSGECVRAFAGHGDVVQSLAVSADGN---SIVSVSTDG 400
>10_08_0941 -
21717703-21718091,21718454-21718564,21718707-21718791,
21718885-21719106,21719804-21720292,21722206-21722322
Length = 470
Score = 26.6 bits (56), Expect = 4.9
Identities = 16/65 (24%), Positives = 35/65 (53%)
Frame = +2
Query: 98 FSPDGESLALIVENIVRVYNVRTGEIVRTLETENYVEELLAIEFPQNEDYNLVGCSTDGR 277
FSPDG LA+ V+ + V +V + ++V+ + V+++ +++ + +Y L G
Sbjct: 15 FSPDGRYLAVAVDYRLVVRDVVSLKVVQLF---SCVDKISFLDWAPDSEYILCGLYKRPM 71
Query: 278 ITTWT 292
+ W+
Sbjct: 72 VQAWS 76
>09_04_0514 - 18236061-18237392
Length = 443
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 236 NEDYNLVGCSTDGRITTWTWENGAVL 313
N NLV C+ DG ++ W +G +L
Sbjct: 302 NGSKNLVTCTEDGEVSVWDIPSGLLL 327
>03_05_1139 -
30689514-30689609,30689795-30689956,30691245-30691299,
30691695-30691959,30692749-30692959,30693542-30693721,
30693802-30693899,30694211-30694277,30694897-30694963,
30695335-30695447,30695988-30696032,30696116-30696223,
30696582-30696791,30697464-30697670,30697786-30697875,
30698168-30698389
Length = 731
Score = 26.6 bits (56), Expect = 4.9
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +2
Query: 254 VGCSTDGRITTWTWENGAVLRETNLHI 334
VG G + + TWE+G +++ N H+
Sbjct: 328 VGVMRAGTVISETWEDGQAIKDLNSHL 354
>02_05_1194 -
34881450-34881593,34882023-34882220,34882522-34882638,
34882753-34882908,34883192-34883341,34883418-34883527,
34883589-34883730,34883836-34884054,34887004-34887099,
34887187-34887489,34887575-34887624,34888003-34888114,
34888204-34888279,34888389-34888684,34888763-34888872,
34889071-34889120,34890439-34890488,34890636-34890816,
34890901-34890932
Length = 863
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/46 (21%), Positives = 26/46 (56%)
Frame = +2
Query: 56 HKIAGRNIIERCPVFSPDGESLALIVENIVRVYNVRTGEIVRTLET 193
+ + G N + + GE LA + +++V+V+++ +GE + + +
Sbjct: 747 YTLQGHNTDVQSVCWDSSGEYLASVSQDLVKVWSISSGECIHEVSS 792
>04_04_0990 -
29955207-29955551,29955639-29955813,29955887-29956017,
29956317-29956436,29956908-29956984,29957070-29957316,
29957413-29957569,29958191-29958309,29958421-29958555,
29958636-29958921,29959009-29959211,29959732-29959881,
29960084-29960266,29960931-29961278
Length = 891
Score = 26.2 bits (55), Expect = 6.4
Identities = 14/66 (21%), Positives = 28/66 (42%)
Frame = +2
Query: 134 ENIVRVYNVRTGEIVRTLETENYVEELLAIEFPQNEDYNLVGCSTDGRITTWTWENGAVL 313
+ V+++ V G ++T E + +L F + V C +DG + WT + +
Sbjct: 570 DRTVKIWAVADGSCLKTFE--GHTSSVLRASF-LSHGTQFVSCGSDGLVKLWTIKTNECI 626
Query: 314 RETNLH 331
+ H
Sbjct: 627 ATFDKH 632
>02_01_0790 +
5925048-5925165,5926133-5926268,5926832-5926913,
5927772-5927947,5928594-5928680,5928817-5928956,
5929546-5929784
Length = 325
Score = 26.2 bits (55), Expect = 6.4
Identities = 10/18 (55%), Positives = 17/18 (94%)
Frame = +2
Query: 143 VRVYNVRTGEIVRTLETE 196
VR+++VR+G+I +TLET+
Sbjct: 170 VRLWDVRSGKIAQTLETK 187
>02_02_0497 +
10961079-10963824,10964182-10964282,10964759-10964800,
10966918-10966986
Length = 985
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -1
Query: 190 FKSSNYFSCTYIVNSNDVFYDQCKRF-AVWRKYGTSFNNISASY 62
F+ T ++N+ FY QC RF A +R + T N S S+
Sbjct: 431 FRHPELLQETSLMNALVSFYSQCDRFDAAFRSFITIQNKDSVSW 474
>01_05_0712 -
24531654-24531874,24532438-24532538,24532621-24532716,
24532951-24533048,24533827-24533883,24534764-24534895,
24535042-24535155,24535227-24535359,24535448-24535678,
24535761-24535843,24536009-24536137,24536504-24536599,
24536719-24536773,24537316-24537386,24537472-24537525,
24537691-24537768,24537985-24538117,24539381-24539496,
24539580-24539651,24540113-24540218,24540657-24540772,
24541170-24541319,24541410-24541492,24541591-24541669,
24542645-24542695
Length = 884
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -3
Query: 278 FVHR*NNLLSYNLHSEEILWQVI 210
F H+ NNL S SE+++W V+
Sbjct: 716 FFHKINNLPSPGTDSEKLIWNVL 738
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,168,686
Number of Sequences: 37544
Number of extensions: 136286
Number of successful extensions: 425
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 425
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 459426840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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