Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_M20
         (454 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    24   0.67 
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   2.7  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   2.7  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    22   2.7  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    22   2.7  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   2.7  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   4.7  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    21   6.3  

>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 24.2 bits (50), Expect = 0.67
 Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 5/59 (8%)
 Frame = +2

Query: 254 AYEDVRSDASPTEWAVFKFEGARIICSGRGSDFTE-----FRTQFSDDERAFGYLRLHM 415
           A ED  S     E A    +  R +CS +     E     FR +F  DER   Y++  M
Sbjct: 18  AIEDTMSKKMTIEEAKKTIKNLRKVCSKKNDTPKELLDGQFRGEFPQDERLMCYMKCIM 76


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -2

Query: 279 ASDLTSSYAAXXXXXXXXXXXVTFLGPFCTIVSYSK 172
           A DLT +YA            +  LG +C +  Y++
Sbjct: 185 ALDLTPTYAVVSSSISFYVPCIVMLGIYCRLYCYAQ 220


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -3

Query: 134 VICTVFYFYKFFGIFTS 84
           V+C +  F++ FG++ S
Sbjct: 109 VMCRIMAFFRMFGLYLS 125


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +2

Query: 212 VTMTTGIDRDTIRAAY-EDVRSDASP 286
           +T+  GID+DT+ A Y E +  D  P
Sbjct: 14  LTVVRGIDQDTVVAKYMEYLMPDIMP 39


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +2

Query: 212 VTMTTGIDRDTIRAAY-EDVRSDASP 286
           +T+  GID+DT+ A Y E +  D  P
Sbjct: 14  LTVVRGIDQDTVVAKYMEYLMPDIMP 39


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = +2

Query: 299 VFKFEGARIICSGRGSDFTEFRTQFSDDERAFGYLRLHM 415
           V K+ G  +IC    +      T+ + D+R+    R+ M
Sbjct: 282 VCKWPGCEVICEDYQAFLKHLNTEHTLDDRSTAQARVRM 320


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 247 YRIPVYTGGHRYFSWTILHNCFVFQTLRHCSHN 149
           Y + VY+   +  SW I HN F F   R+ ++N
Sbjct: 197 YALVVYSWA-KNDSWRITHNFFYFDP-RYGNYN 227


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 356 EFRTQFSDDERAFGYLRLHM 415
           +FR +F  DER   Y++  M
Sbjct: 31  QFRGEFPQDERLMCYMKCIM 50


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,454
Number of Sequences: 438
Number of extensions: 3241
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11943513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)