Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_M19
(545 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L08403-5|AAT92077.1| 531|Caenorhabditis elegans Hypothetical pr... 79 2e-15
L08403-4|AAA28021.1| 529|Caenorhabditis elegans Hypothetical pr... 79 2e-15
Z79597-2|CAB01860.2| 611|Caenorhabditis elegans Hypothetical pr... 31 0.72
AL132841-7|CAB61033.1| 611|Caenorhabditis elegans Hypothetical ... 31 0.72
AL132904-5|CAC35837.2| 406|Caenorhabditis elegans Hypothetical ... 30 0.95
Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical pr... 29 1.7
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 29 2.2
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 29 2.9
U41034-2|AAA82379.1| 915|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical pr... 28 3.8
Z99281-37|CAJ44244.1| 740|Caenorhabditis elegans Hypothetical p... 28 5.0
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical p... 28 5.0
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 28 5.0
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 28 5.0
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 28 5.0
AY611485-1|AAT37524.1| 740|Caenorhabditis elegans epidermal gro... 28 5.0
AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical ... 28 5.0
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 28 5.0
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 28 5.0
AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical ... 28 5.0
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 28 5.0
U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger pro... 27 6.7
L23645-6|AAO91714.1| 635|Caenorhabditis elegans Zinc finger pro... 27 6.7
L23645-4|AAK26137.1| 867|Caenorhabditis elegans Zinc finger pro... 27 6.7
AF100657-4|AAK70655.2| 261|Caenorhabditis elegans Hypothetical ... 27 8.8
AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen prot... 27 8.8
AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein. 27 8.8
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 27 8.8
AF003135-5|AAK18990.1| 678|Caenorhabditis elegans Hypothetical ... 27 8.8
AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical ... 27 8.8
AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical ... 27 8.8
>L08403-5|AAT92077.1| 531|Caenorhabditis elegans Hypothetical
protein F42H10.7b protein.
Length = 531
Score = 79.4 bits (187), Expect = 2e-15
Identities = 59/152 (38%), Positives = 77/152 (50%), Gaps = 8/152 (5%)
Frame = +3
Query: 114 RPHELDTWRYTARNHIMYVPSGAASQQA----TPKSELVHRNTRLTVAPFDHNKNKQVIS 281
RP +D W Y A N +++ P GAA A + + N R T P D K K
Sbjct: 238 RPLNVDNWAYKAWNTVLFNPDGAALTPAEIADAARKQQTEINKRGTRFP-DSGKLKPSDE 296
Query: 282 AIART--QDASVN-GKIGVDGVSLTSEKPSGQYSLVATPSPRPGDDGDCSPLMTWGEIEG 452
A+ R A N GK+ G +T P+ + L+ TP+P P DD D SPLMTWGEI+G
Sbjct: 297 AMTRAAVSHALANAGKVDFLGNEVT---PANSFKLLETPNPNP-DDMD-SPLMTWGEIDG 351
Query: 453 TPFRLDGGD-TPLPAVGAGTAYRMLEGGVRER 545
TPFRLD D T GA +++ E RE+
Sbjct: 352 TPFRLDAPDVTEHSLPGAAPVFKIPEVPYREK 383
>L08403-4|AAA28021.1| 529|Caenorhabditis elegans Hypothetical
protein F42H10.7a protein.
Length = 529
Score = 79.4 bits (187), Expect = 2e-15
Identities = 59/152 (38%), Positives = 77/152 (50%), Gaps = 8/152 (5%)
Frame = +3
Query: 114 RPHELDTWRYTARNHIMYVPSGAASQQA----TPKSELVHRNTRLTVAPFDHNKNKQVIS 281
RP +D W Y A N +++ P GAA A + + N R T P D K K
Sbjct: 238 RPLNVDNWAYKAWNTVLFNPDGAALTPAEIADAARKQQTEINKRGTRFP-DSGKLKPSDE 296
Query: 282 AIART--QDASVN-GKIGVDGVSLTSEKPSGQYSLVATPSPRPGDDGDCSPLMTWGEIEG 452
A+ R A N GK+ G +T P+ + L+ TP+P P DD D SPLMTWGEI+G
Sbjct: 297 AMTRAAVSHALANAGKVDFLGNEVT---PANSFKLLETPNPNP-DDMD-SPLMTWGEIDG 351
Query: 453 TPFRLDGGD-TPLPAVGAGTAYRMLEGGVRER 545
TPFRLD D T GA +++ E RE+
Sbjct: 352 TPFRLDAPDVTEHSLPGAAPVFKIPEVPYREK 383
>Z79597-2|CAB01860.2| 611|Caenorhabditis elegans Hypothetical
protein C33A11.1 protein.
Length = 611
Score = 30.7 bits (66), Expect = 0.72
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -2
Query: 499 PTAGSGVSPPSSLKGVPSISPQVINGEQS-PSSP 401
P+A SGVS P S + P SP V G S P++P
Sbjct: 290 PSADSGVSSPMSARSAPYASPHVPQGTCSGPTTP 323
>AL132841-7|CAB61033.1| 611|Caenorhabditis elegans Hypothetical
protein C33A11.1 protein.
Length = 611
Score = 30.7 bits (66), Expect = 0.72
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -2
Query: 499 PTAGSGVSPPSSLKGVPSISPQVINGEQS-PSSP 401
P+A SGVS P S + P SP V G S P++P
Sbjct: 290 PSADSGVSSPMSARSAPYASPHVPQGTCSGPTTP 323
>AL132904-5|CAC35837.2| 406|Caenorhabditis elegans Hypothetical
protein Y111B2A.9a protein.
Length = 406
Score = 30.3 bits (65), Expect = 0.95
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = -2
Query: 508 VPAPTAGSGVSPPSSLKGVPSISPQVINGEQSPSSPGRGDGVATSEYWP 362
+P+P G SLK P ++ +G S SS G GV S P
Sbjct: 216 MPSPIIGGAAGGSKSLKRPPDLNGSNNSGSSSSSSGGANSGVQQSSVHP 264
>Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical
protein D1046.1 protein.
Length = 489
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -2
Query: 544 RSRTPPSSILYAVPAPTAGSGVSPPSSLKGVPSISPQVINGEQSP 410
RS PP + P P S PS+L P + Q ING+Q P
Sbjct: 218 RSGPPPLMMQQVRPTPLMSQPTSLPSNLNQAPQMRLQ-INGQQVP 261
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = -2
Query: 532 PPSSILYAVPAPTAGSGVSPPS----SLKGVPSISPQVINGEQSPSSPGR 395
PP + +P P G G PPS S PS + NG PS P +
Sbjct: 927 PPIPVPNPIPKPNPGPGPGPPSPNGPSDPNKPSPNGPSPNGPNGPSDPNK 976
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +3
Query: 315 GKIGVDGVSL--TSEKPSGQYSLVATPSPRPGDDGDCSP 425
G+ G G+SL T + P G P+ PG DGD P
Sbjct: 117 GRRGASGISLATTHDIPGGCIKCPEGPAGPPGPDGDSGP 155
>U41034-2|AAA82379.1| 915|Caenorhabditis elegans Hypothetical
protein M02D8.3 protein.
Length = 915
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -2
Query: 511 AVPAPTAGSGVSPPSSLKGVPSISPQVINGEQSPSSP 401
A+P PTA S SP S K P IN P +P
Sbjct: 301 ALPVPTAQSSKSPKESSKEPPKSLCPAINRSDLPQTP 337
>Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical
protein F38B7.3 protein.
Length = 407
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/49 (28%), Positives = 18/49 (36%)
Frame = -2
Query: 502 APTAGSGVSPPSSLKGVPSISPQVINGEQSPSSPGRGDGVATSEYWPLG 356
AP G G PP + P V P PG A+ + +P G
Sbjct: 144 APQQGPGAQPPQQQNNGGYVPPTVYPSAPPPVQPGYNPRPASGQSYPSG 192
>Z99281-37|CAJ44244.1| 740|Caenorhabditis elegans Hypothetical
protein Y57G11C.24h protein.
Length = 740
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 150 RNHIMYVPSGAASQQATPKSELVHRNTRLTVAPFD 254
RN + P+ S Q TPKS HRN + FD
Sbjct: 487 RNMVDTAPNTPQSMQRTPKSRPPHRNMSVDNLEFD 521
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 378 VATPSPRPGDDGDCSPLMTWGEIEGTPFRLDGGDTPLPAVGAGTAY 515
+A P+P ++ DC P ++E T + + GDT + AGTA+
Sbjct: 641 IACPNPEYQNEEDCCPTCPEQKVENT--KNEKGDTIVCTDDAGTAH 684
>Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 378 VATPSPRPGDDGDCSPLMTWGEIEGTPFRLDGGDTPLPAVGAGTAY 515
+A P+P ++ DC P ++E T + + GDT + AGTA+
Sbjct: 575 IACPNPEYQNEEDCCPTCPEQKVENT--KNEKGDTIVCTDDAGTAH 618
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 378 VATPSPRPGDDGDCSPLMTWGEIEGTPFRLDGGDTPLPAVGAGTAY 515
+A P+P ++ DC P ++E T + + GDT + AGTA+
Sbjct: 575 IACPNPEYQNEEDCCPTCPEQKVENT--KNEKGDTIVCTDDAGTAH 618
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 378 VATPSPRPGDDGDCSPLMTWGEIEGTPFRLDGGDTPLPAVGAGTAY 515
+A P+P ++ DC P ++E T + + GDT + AGTA+
Sbjct: 641 IACPNPEYQNEEDCCPTCPEQKVENT--KNEKGDTIVCTDDAGTAH 684
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 378 VATPSPRPGDDGDCSPLMTWGEIEGTPFRLDGGDTPLPAVGAGTAY 515
+A P+P ++ DC P ++E T + + GDT + AGTA+
Sbjct: 575 IACPNPEYQNEEDCCPTCPEQKVENT--KNEKGDTIVCTDDAGTAH 618
>AY611485-1|AAT37524.1| 740|Caenorhabditis elegans epidermal growth
factor receptorpathway substrate 8 splice variant B
protein.
Length = 740
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 150 RNHIMYVPSGAASQQATPKSELVHRNTRLTVAPFD 254
RN + P+ S Q TPKS HRN + FD
Sbjct: 487 RNMVDTAPNTPQSMQRTPKSRPPHRNMSVDNLEFD 521
>AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 378 VATPSPRPGDDGDCSPLMTWGEIEGTPFRLDGGDTPLPAVGAGTAY 515
+A P+P ++ DC P ++E T + + GDT + AGTA+
Sbjct: 575 IACPNPEYQNEEDCCPTCPEQKVENT--KNEKGDTIVCTDDAGTAH 618
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 378 VATPSPRPGDDGDCSPLMTWGEIEGTPFRLDGGDTPLPAVGAGTAY 515
+A P+P ++ DC P ++E T + + GDT + AGTA+
Sbjct: 575 IACPNPEYQNEEDCCPTCPEQKVENT--KNEKGDTIVCTDDAGTAH 618
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 378 VATPSPRPGDDGDCSPLMTWGEIEGTPFRLDGGDTPLPAVGAGTAY 515
+A P+P ++ DC P ++E T + + GDT + AGTA+
Sbjct: 575 IACPNPEYQNEEDCCPTCPEQKVENT--KNEKGDTIVCTDDAGTAH 618
>AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical
protein T10D4.6 protein.
Length = 796
Score = 27.9 bits (59), Expect = 5.0
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -2
Query: 541 SRTPPSSILYAVPAPTAGSGVSPPSSLKGVPSISPQVINGEQSPSSPGRGDGV 383
SR+ P ++ + P P A S SP +L SPQV + SS R V
Sbjct: 611 SRSLPPTVDVSSPPPVASSSCSPYPALLASADASPQVPAWASARSSISRSTPV 663
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
on autosome protein2 protein.
Length = 1758
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -2
Query: 532 PPSSILYAVPAPTAGSGVSPPSSLKGVPSISPQVINGEQSPSS 404
PP S + ++ + AGS +S PS+ + PS + +I S SS
Sbjct: 200 PPLSSITSISSSAAGSSISAPSTSQ--PSTTSSLITSPPSTSS 240
>U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger
protein protein.
Length = 839
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = -2
Query: 541 SRTPPSSILYAVPAPTAGSGVSPPSSLKGVPSISPQVINGEQSPSSPG 398
SR PS+I VP TA + ++ ++ ++ + N +PS+ G
Sbjct: 726 SRKTPSNIPLTVPLSTAATALTTTTAASSGAPVNSNIQNHRATPSTAG 773
>L23645-6|AAO91714.1| 635|Caenorhabditis elegans Zinc finger
protein protein 1,isoform c protein.
Length = 635
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = -2
Query: 541 SRTPPSSILYAVPAPTAGSGVSPPSSLKGVPSISPQVINGEQSPSSPG 398
SR PS+I VP TA + ++ ++ ++ + N +PS+ G
Sbjct: 494 SRKTPSNIPLTVPLSTAATALTTTTAASSGAPVNSNIQNHRATPSTAG 541
>L23645-4|AAK26137.1| 867|Caenorhabditis elegans Zinc finger
protein protein 1,isoform a protein.
Length = 867
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = -2
Query: 541 SRTPPSSILYAVPAPTAGSGVSPPSSLKGVPSISPQVINGEQSPSSPG 398
SR PS+I VP TA + ++ ++ ++ + N +PS+ G
Sbjct: 726 SRKTPSNIPLTVPLSTAATALTTTTAASSGAPVNSNIQNHRATPSTAG 773
>AF100657-4|AAK70655.2| 261|Caenorhabditis elegans Hypothetical
protein F52C12.2 protein.
Length = 261
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 357 PSGQYSLVATPSPRPGDDGDCSPLMTWGEIEGTP 458
P+G Y+L P +G C +W E+E TP
Sbjct: 103 PTGTYTLAPRDRPFVEQNGLCVVDCSWKEVERTP 136
>AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen protein
102 protein.
Length = 460
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -2
Query: 511 AVPAPTAGSGVSPPSSLKGVPSISPQVINGEQSPSSPGRGDGVATSEYWPLGFS 350
A A AG G P + + +P+ G ++P + G+G G A+ Y P G S
Sbjct: 407 APAAEGAGGGAEPAGAAPEAAAAAPEGAGGGEAPPTNGKG-GEASPAY-PTGQS 458
>AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein.
Length = 1666
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 514 YAVPAPTAGSGVSPPSSLKGVPSISPQVINGEQSPSS 404
Y +P P + S S+ + SI P + G QSPSS
Sbjct: 1299 YRIPPPRVPTVTSTSSNYAPLHSIRPASMYGYQSPSS 1335
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = -2
Query: 505 PAPTAGSGVSPPSSLKGVPSISPQVINGEQSPSSPGRGDG 386
P P G+G PP +S + N + P P +G G
Sbjct: 65 PPPPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPPKGTG 104
>AF003135-5|AAK18990.1| 678|Caenorhabditis elegans Hypothetical
protein W03F11.6b protein.
Length = 678
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 514 YAVPAPTAGSGVSPPSSLKGVPSISPQVINGEQSPSS 404
Y +P P + S S+ + SI P + G QSPSS
Sbjct: 317 YRIPPPRVPTVTSTSSNYAPLHSIRPASMYGYQSPSS 353
>AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical
protein W03F11.6c protein.
Length = 1419
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 514 YAVPAPTAGSGVSPPSSLKGVPSISPQVINGEQSPSS 404
Y +P P + S S+ + SI P + G QSPSS
Sbjct: 1297 YRIPPPRVPTVTSTSSNYAPLHSIRPASMYGYQSPSS 1333
>AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical
protein W03F11.6a protein.
Length = 1658
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 514 YAVPAPTAGSGVSPPSSLKGVPSISPQVINGEQSPSS 404
Y +P P + S S+ + SI P + G QSPSS
Sbjct: 1297 YRIPPPRVPTVTSTSSNYAPLHSIRPASMYGYQSPSS 1333
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,736,975
Number of Sequences: 27780
Number of extensions: 231781
Number of successful extensions: 883
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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