Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_M18
(492 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U56963-6|AAB38123.3| 324|Caenorhabditis elegans Serpentine rece... 33 0.085
U56963-5|AAB38122.3| 323|Caenorhabditis elegans Serpentine rece... 33 0.085
Z68320-3|CAA92707.3| 477|Caenorhabditis elegans Hypothetical pr... 31 0.45
Z92835-6|CAB07399.1| 496|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z75526-8|CAA99773.1| 496|Caenorhabditis elegans Hypothetical pr... 29 1.8
AF221132-1|AAF82410.1| 498|Caenorhabditis elegans diacylglycero... 29 1.8
Z35640-6|CAA84702.2| 1226|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z35639-9|CAA84700.2| 1226|Caenorhabditis elegans Hypothetical pr... 28 3.2
U00041-3|AAA50669.1| 59|Caenorhabditis elegans Hypothetical pr... 27 5.6
Z83236-1|CAB05777.1| 445|Caenorhabditis elegans Hypothetical pr... 27 7.4
>U56963-6|AAB38123.3| 324|Caenorhabditis elegans Serpentine
receptor, class v protein31 protein.
Length = 324
Score = 33.5 bits (73), Expect = 0.085
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -2
Query: 302 PDLPIFMYFDASYPNLKSVLSTLKILIELFFYSNEFNQIQSFFLQLYVQFSV 147
P PIF+++ S P+L + L LI+L F+S + QS F + +Q S+
Sbjct: 5 PSWPIFLFYGISIPSLPLYIMVLICLIKLRFHSKTY---QSTFYTILMQHSI 53
>U56963-5|AAB38122.3| 323|Caenorhabditis elegans Serpentine
receptor, class v protein30 protein.
Length = 323
Score = 33.5 bits (73), Expect = 0.085
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -2
Query: 302 PDLPIFMYFDASYPNLKSVLSTLKILIELFFYSNEFNQIQSFFLQLYVQFSV 147
P PIF+++ S P+L + L LI+L F+S + QS F + +Q S+
Sbjct: 5 PSWPIFLFYGISIPSLPLYIMVLICLIKLRFHSKTY---QSTFYTILMQHSI 53
>Z68320-3|CAA92707.3| 477|Caenorhabditis elegans Hypothetical
protein W07A12.6 protein.
Length = 477
Score = 31.1 bits (67), Expect = 0.45
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 280 YIKIGRSGQKYRPLFFFFFVGRCNYWRLLTAF 375
YI IG +K+ P F F V C +W +++ F
Sbjct: 172 YIAIGPIMKKFLPRFTFSSVSSCGFWNIISLF 203
>Z92835-6|CAB07399.1| 496|Caenorhabditis elegans Hypothetical
protein H19N07.4 protein.
Length = 496
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -1
Query: 360 PPIITPAHKKKKEKWSILLTGPTYLYVFRRFVSESEVSF 244
P ++T HK K WS+++ G Y+ +F+S V++
Sbjct: 163 PVVVTLTHKWKNPLWSVVMMG-VYVIEALKFISYGHVNY 200
>Z75526-8|CAA99773.1| 496|Caenorhabditis elegans Hypothetical
protein H19N07.4 protein.
Length = 496
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -1
Query: 360 PPIITPAHKKKKEKWSILLTGPTYLYVFRRFVSESEVSF 244
P ++T HK K WS+++ G Y+ +F+S V++
Sbjct: 163 PVVVTLTHKWKNPLWSVVMMG-VYVIEALKFISYGHVNY 200
>AF221132-1|AAF82410.1| 498|Caenorhabditis elegans diacylglycerol
acyltransferase protein.
Length = 498
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -1
Query: 360 PPIITPAHKKKKEKWSILLTGPTYLYVFRRFVSESEVSF 244
P ++T HK K WS+++ G Y+ +F+S V++
Sbjct: 165 PVVVTLTHKWKNPLWSVVMMG-VYVIEALKFISYGHVNY 202
>Z35640-6|CAA84702.2| 1226|Caenorhabditis elegans Hypothetical
protein F43D9.1 protein.
Length = 1226
Score = 28.3 bits (60), Expect = 3.2
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 270 SVEIHKDR*VRSKV*TTFLFFFCGPV*LLAAFNRVFG--PYYSKPCLGLLIY 419
S E KD V S + FC + + F FG Y SKPCLG++I+
Sbjct: 433 SPETFKDTVVASLKDQYWCLQFCVIILFVFCFLGSFGINAYQSKPCLGIMIF 484
>Z35639-9|CAA84700.2| 1226|Caenorhabditis elegans Hypothetical
protein F43D9.1 protein.
Length = 1226
Score = 28.3 bits (60), Expect = 3.2
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 270 SVEIHKDR*VRSKV*TTFLFFFCGPV*LLAAFNRVFG--PYYSKPCLGLLIY 419
S E KD V S + FC + + F FG Y SKPCLG++I+
Sbjct: 433 SPETFKDTVVASLKDQYWCLQFCVIILFVFCFLGSFGINAYQSKPCLGIMIF 484
>U00041-3|AAA50669.1| 59|Caenorhabditis elegans Hypothetical
protein C03B8.2 protein.
Length = 59
Score = 27.5 bits (58), Expect = 5.6
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 217 NSIKILRVDKTDFRF-GYEASKYIKIGRSGQKYRPLFFFFFVGRCNYWRLLT 369
N++K+L + D F Y S + R + +F FF + N+W+L +
Sbjct: 3 NAVKLLELSLIDDHFLRYRPSDAAQNHRINNSTKFIFSFFMFNKQNFWQLFS 54
>Z83236-1|CAB05777.1| 445|Caenorhabditis elegans Hypothetical
protein K10H10.1 protein.
Length = 445
Score = 27.1 bits (57), Expect = 7.4
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Frame = +1
Query: 355 WRLLTAFLGLIILSHAWVC*YIITKNTG----KYYLPDEPII 468
WR L F+G+I L WV +++ + G LPDE ++
Sbjct: 184 WRALFQFVGIISLIWCWVFRWVLDRAKGPGGRSSPLPDEEVL 225
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,303,652
Number of Sequences: 27780
Number of extensions: 206794
Number of successful extensions: 388
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 388
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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